BLASTX nr result

ID: Coptis21_contig00000264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000264
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17995.1| unknown [Picea sitchensis]                             364   2e-98
ref|XP_002970923.1| hypothetical protein SELMODRAFT_441314 [Sela...   355   8e-96
ref|XP_002991151.1| hypothetical protein SELMODRAFT_448303 [Sela...   355   1e-95
ref|XP_002307978.1| predicted protein [Populus trichocarpa] gi|2...   333   6e-89
ref|XP_001778187.1| predicted protein [Physcomitrella patens sub...   333   6e-89

>gb|ABR17995.1| unknown [Picea sitchensis]
          Length = 310

 Score =  364 bits (934), Expect = 2e-98
 Identities = 185/252 (73%), Positives = 215/252 (85%)
 Frame = +2

Query: 191 AQNVTTPEAQDALKRALAKRAVGLVKSGMVVGLGTGSTASLATEELGRLIKQGKLKDVVA 370
           +   T P  Q+ LKRA+AKRAV LVK GMV+GLGTGSTASLA EELG+LI+QGKLKDVV 
Sbjct: 55  SSQATEPLLQNTLKRAVAKRAVELVKPGMVIGLGTGSTASLAIEELGKLIQQGKLKDVVG 114

Query: 371 VGANYQSRVLARQYGVKTVDLNDVNSIDIAFDGVDEVDFKKNLLKGGGAAHTMQKVVDSV 550
           VG +YQSRVLARQ+GVKTVDLNDV  IDIAFDG DEVD   N+LKGGGAAHTM KV+D++
Sbjct: 115 VGTSYQSRVLARQFGVKTVDLNDVIHIDIAFDGADEVDPSMNILKGGGAAHTMGKVIDTM 174

Query: 551 AKECVILADQSKVVLQLGSTFPVPVEVLPPALSPVLRRLVTLGGVPEIRSALRKDGPVIT 730
           AK+ VIL DQSKVV +LG  FPVPVEVLPPA+SPVLR+LV LGGVPEIRSALRKDGPVIT
Sbjct: 175 AKKSVILVDQSKVVFELGQIFPVPVEVLPPAISPVLRQLVALGGVPEIRSALRKDGPVIT 234

Query: 731 DLGNMIVDVSFPNGIPDPADLEKSINMIPGVVENGIVSGIATSVLVAIQDGDNVTVLDLE 910
           D GNM+VDVSFP GI DPA LEK I +IPGVVENG+V+G+A+SVLVA QDGD++T+++L+
Sbjct: 235 DFGNMVVDVSFPEGIKDPAALEKRIKLIPGVVENGLVTGVASSVLVATQDGDDITIVELD 294

Query: 911 EFVKLIDAPTNA 946
           EFVK + +   A
Sbjct: 295 EFVKSLKSVKEA 306


>ref|XP_002970923.1| hypothetical protein SELMODRAFT_441314 [Selaginella moellendorffii]
           gi|300161634|gb|EFJ28249.1| hypothetical protein
           SELMODRAFT_441314 [Selaginella moellendorffii]
          Length = 275

 Score =  355 bits (912), Expect = 8e-96
 Identities = 176/252 (69%), Positives = 214/252 (84%)
 Frame = +2

Query: 185 AVAQNVTTPEAQDALKRALAKRAVGLVKSGMVVGLGTGSTASLATEELGRLIKQGKLKDV 364
           A A     P  QD+LKRA+AKRAV LVK GM+VGLGTGST+S+A +ELG+L+ QGKLKDV
Sbjct: 21  AAAAPAIDPTLQDSLKRAVAKRAVELVKPGMIVGLGTGSTSSMAIQELGKLVSQGKLKDV 80

Query: 365 VAVGANYQSRVLARQYGVKTVDLNDVNSIDIAFDGVDEVDFKKNLLKGGGAAHTMQKVVD 544
           V V ++YQSR+LARQYGVKTVDLNDVN ID AFDG DEVD   NL+KGGGAAHTM+KVVD
Sbjct: 81  VGVASSYQSRILARQYGVKTVDLNDVNVIDFAFDGADEVDASMNLIKGGGAAHTMEKVVD 140

Query: 545 SVAKECVILADQSKVVLQLGSTFPVPVEVLPPALSPVLRRLVTLGGVPEIRSALRKDGPV 724
           ++AK+C+IL DQ+KVV +LG TFPVPVEVLP A+SPVLR LV LGGVPEIR+ALRKDGPV
Sbjct: 141 AMAKQCIILVDQTKVVSKLGLTFPVPVEVLPFAISPVLRALVGLGGVPEIRNALRKDGPV 200

Query: 725 ITDLGNMIVDVSFPNGIPDPADLEKSINMIPGVVENGIVSGIATSVLVAIQDGDNVTVLD 904
           ITDLGNM+VDV FP+G+ DPA++E+SINMIPGVVE+G+  GIA +VLVA +DGD +T+++
Sbjct: 201 ITDLGNMVVDVRFPDGVKDPAEMERSINMIPGVVESGLFVGIANTVLVATRDGDEITIVE 260

Query: 905 LEEFVKLIDAPT 940
           L +FV+ +   T
Sbjct: 261 LADFVRSLKEAT 272


>ref|XP_002991151.1| hypothetical protein SELMODRAFT_448303 [Selaginella moellendorffii]
           gi|300141082|gb|EFJ07797.1| hypothetical protein
           SELMODRAFT_448303 [Selaginella moellendorffii]
          Length = 275

 Score =  355 bits (910), Expect = 1e-95
 Identities = 176/252 (69%), Positives = 214/252 (84%)
 Frame = +2

Query: 185 AVAQNVTTPEAQDALKRALAKRAVGLVKSGMVVGLGTGSTASLATEELGRLIKQGKLKDV 364
           A A     P  QD+LKRA+AKRAV LVK GM+VGLGTGST+S+A +ELG+L+ QGKLKDV
Sbjct: 21  AAAAPAIDPTLQDSLKRAVAKRAVELVKPGMIVGLGTGSTSSMAIQELGKLVSQGKLKDV 80

Query: 365 VAVGANYQSRVLARQYGVKTVDLNDVNSIDIAFDGVDEVDFKKNLLKGGGAAHTMQKVVD 544
           V V ++YQSR+LARQYGVKTVDLNDVN ID AFDG DEVD   NL+KGGGAAHTM+KVVD
Sbjct: 81  VGVASSYQSRILARQYGVKTVDLNDVNVIDFAFDGADEVDASMNLIKGGGAAHTMEKVVD 140

Query: 545 SVAKECVILADQSKVVLQLGSTFPVPVEVLPPALSPVLRRLVTLGGVPEIRSALRKDGPV 724
           ++AK+C+IL DQSKVV +LG TFPVPVEVLP A+SPVLR LV LGGVPEIR+ALRKDGPV
Sbjct: 141 AMAKQCIILVDQSKVVSKLGLTFPVPVEVLPFAISPVLRALVGLGGVPEIRNALRKDGPV 200

Query: 725 ITDLGNMIVDVSFPNGIPDPADLEKSINMIPGVVENGIVSGIATSVLVAIQDGDNVTVLD 904
           ITDLGNM+VDV FP+G+ +PA++E+SINMIPGVVE+G+  GIA +VLVA +DGD +T+++
Sbjct: 201 ITDLGNMVVDVRFPDGVKNPAEMERSINMIPGVVESGLFVGIANTVLVATRDGDEITIVE 260

Query: 905 LEEFVKLIDAPT 940
           L +FV+ +   T
Sbjct: 261 LADFVRSLKEAT 272


>ref|XP_002307978.1| predicted protein [Populus trichocarpa] gi|222853954|gb|EEE91501.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  333 bits (853), Expect = 6e-89
 Identities = 162/237 (68%), Positives = 204/237 (86%)
 Frame = +2

Query: 218 QDALKRALAKRAVGLVKSGMVVGLGTGSTASLATEELGRLIKQGKLKDVVAVGANYQSRV 397
           Q++ +R LA++AV LVKSGMV+GLG+G+T S+  EELGRLI++GKLKD++AVG NYQSRV
Sbjct: 224 QESTERILARKAVELVKSGMVIGLGSGTTISMVMEELGRLIREGKLKDIIAVGGNYQSRV 283

Query: 398 LARQYGVKTVDLNDVNSIDIAFDGVDEVDFKKNLLKGGGAAHTMQKVVDSVAKECVILAD 577
           LA Q+GV  VDL+ V+ IDIAFDGVDEVDF KNLLK GG AHTMQKV+DSVA EC+IL D
Sbjct: 284 LATQFGVTVVDLSGVSKIDIAFDGVDEVDFNKNLLKCGGPAHTMQKVIDSVASECIILVD 343

Query: 578 QSKVVLQLGSTFPVPVEVLPPALSPVLRRLVTLGGVPEIRSALRKDGPVITDLGNMIVDV 757
           Q KVV +LGS FPVPVEVLPPAL+PVL+RL TLGGVPEIR    ++GP+ TDLGNM+VDV
Sbjct: 344 QPKVVHRLGSAFPVPVEVLPPALTPVLKRLATLGGVPEIRFTSNENGPLFTDLGNMVVDV 403

Query: 758 SFPNGIPDPADLEKSINMIPGVVENGIVSGIATSVLVAIQDGDNVTVLDLEEFVKLI 928
           SFPNGI +PA+LEK+I ++PGVVENGIV+G+AT+VLVA+++   V V++LE++V+ +
Sbjct: 404 SFPNGIQNPAELEKNIKLLPGVVENGIVTGVATTVLVAVKERGAVNVMNLEDYVRTV 460


>ref|XP_001778187.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162670400|gb|EDQ56969.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 316

 Score =  333 bits (853), Expect = 6e-89
 Identities = 166/244 (68%), Positives = 200/244 (81%)
 Frame = +2

Query: 209 PEAQDALKRALAKRAVGLVKSGMVVGLGTGSTASLATEELGRLIKQGKLKDVVAVGANYQ 388
           P +QD LKRA+AK+A+ LVKSGMVVGLGTGST+S+A EELG LI+  KLKD+V V  +YQ
Sbjct: 68  PSSQDNLKRAVAKKAIELVKSGMVVGLGTGSTSSMAIEELGNLIQANKLKDIVGVATSYQ 127

Query: 389 SRVLARQYGVKTVDLNDVNSIDIAFDGVDEVDFKKNLLKGGGAAHTMQKVVDSVAKECVI 568
           S+VLARQ+GVKTVDLNDVN IDIAFDG DEVD   +L+KGGGAAHTM+KVVDS+AKECVI
Sbjct: 128 SKVLARQFGVKTVDLNDVNHIDIAFDGADEVDSGMSLIKGGGAAHTMEKVVDSIAKECVI 187

Query: 569 LADQSKVVLQLGSTFPVPVEVLPPALSPVLRRLVTLGGVPEIRSALRKDGPVITDLGNMI 748
           L D++KVV  LG +FPVPVEVLP AL+PVLR L  LGG PEIR+ALRKDGPVITDLGNM+
Sbjct: 188 LIDETKVVKTLGLSFPVPVEVLPFALAPVLRALAALGGQPEIRTALRKDGPVITDLGNMV 247

Query: 749 VDVSFPNGIPDPADLEKSINMIPGVVENGIVSGIATSVLVAIQDGDNVTVLDLEEFVKLI 928
           VDV FP G+ DPA++E  INMIPGV++NG+   +A  VLV  +DGD  +V++  EFV  +
Sbjct: 248 VDVRFPEGVKDPAEMETKINMIPGVIDNGLFINVAHKVLVGTKDGDETSVVEFAEFVSSM 307

Query: 929 DAPT 940
            + T
Sbjct: 308 KSST 311


Top