BLASTX nr result
ID: Coptis21_contig00000256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000256 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143249.1| PREDICTED: 60S ribosomal protein L12-1-like ... 64 1e-08 gb|AFX66983.1| 60S ribosomal protein L12 [Solanum tuberosum] 64 1e-08 ref|XP_004137822.1| PREDICTED: 60S ribosomal protein L12-1-like ... 62 4e-08 emb|CBI32732.3| unnamed protein product [Vitis vinifera] 62 5e-08 ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatu... 62 5e-08 >ref|XP_004143249.1| PREDICTED: 60S ribosomal protein L12-1-like [Cucumis sativus] gi|449482476|ref|XP_004156294.1| PREDICTED: 60S ribosomal protein L12-1-like [Cucumis sativus] Length = 166 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = +1 Query: 1 VSVGCTVDGKDPKDLQQEITDGDVEIPQD 87 VSVGCTVDGKDPKDLQQEITDGDVEIPQD Sbjct: 138 VSVGCTVDGKDPKDLQQEITDGDVEIPQD 166 >gb|AFX66983.1| 60S ribosomal protein L12 [Solanum tuberosum] Length = 166 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = +1 Query: 1 VSVGCTVDGKDPKDLQQEITDGDVEIPQD 87 VSVGCTVDGKDPKDLQQEITDGDVEIPQD Sbjct: 138 VSVGCTVDGKDPKDLQQEITDGDVEIPQD 166 >ref|XP_004137822.1| PREDICTED: 60S ribosomal protein L12-1-like [Cucumis sativus] gi|449513637|ref|XP_004164383.1| PREDICTED: 60S ribosomal protein L12-1-like [Cucumis sativus] Length = 166 Score = 62.4 bits (150), Expect = 4e-08 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +1 Query: 1 VSVGCTVDGKDPKDLQQEITDGDVEIPQD 87 VSVGCTVDGKDPKDLQQEI+DGDVEIPQD Sbjct: 138 VSVGCTVDGKDPKDLQQEISDGDVEIPQD 166 >emb|CBI32732.3| unnamed protein product [Vitis vinifera] Length = 110 Score = 62.0 bits (149), Expect = 5e-08 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = +1 Query: 1 VSVGCTVDGKDPKDLQQEITDGDVEIPQD 87 VSVGCTVDGKDPKDLQQEI DGDVEIPQD Sbjct: 82 VSVGCTVDGKDPKDLQQEIADGDVEIPQD 110 >ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatula] gi|217071520|gb|ACJ84120.1| unknown [Medicago truncatula] gi|217075190|gb|ACJ85955.1| unknown [Medicago truncatula] gi|355507440|gb|AES88582.1| 60S ribosomal protein L12 [Medicago truncatula] gi|388514003|gb|AFK45063.1| unknown [Medicago truncatula] Length = 166 Score = 62.0 bits (149), Expect = 5e-08 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = +1 Query: 1 VSVGCTVDGKDPKDLQQEITDGDVEIPQD 87 VSVGCTVDGKDPKDLQQEI DGDVEIPQD Sbjct: 138 VSVGCTVDGKDPKDLQQEINDGDVEIPQD 166