BLASTX nr result
ID: Coptis21_contig00000255
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000255 (872 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus... 317 2e-84 ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis ... 316 4e-84 ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ... 316 5e-84 ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatu... 315 7e-84 ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V... 314 2e-83 >ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus communis] gi|223530177|gb|EEF32086.1| 60S ribosomal protein L12, putative [Ricinus communis] Length = 166 Score = 317 bits (812), Expect = 2e-84 Identities = 159/166 (95%), Positives = 165/166 (99%) Frame = +1 Query: 67 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246 MPPKFDPSQVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT Sbjct: 1 MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60 Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISIDDVIEIAKIMKPR 426 VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKHSGNIS+DDVIEIAK+MKPR Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMKPR 120 Query: 427 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPED 564 SMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVP D Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166 >ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera] gi|147785001|emb|CAN75443.1| hypothetical protein VITISV_019658 [Vitis vinifera] Length = 166 Score = 316 bits (810), Expect = 4e-84 Identities = 157/166 (94%), Positives = 165/166 (99%) Frame = +1 Query: 67 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60 Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISIDDVIEIAKIMKPR 426 VKLTVQNRQAKVSVVPSAAALVIK+LKEPERDRKKTKNIKH+GNIS+DDVIEIA++M+PR Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120 Query: 427 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPED 564 SMAK+L+GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEVPED Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEVPED 166 >ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera] gi|147835636|emb|CAN66258.1| hypothetical protein VITISV_001237 [Vitis vinifera] Length = 166 Score = 316 bits (809), Expect = 5e-84 Identities = 157/166 (94%), Positives = 165/166 (99%) Frame = +1 Query: 67 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60 Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISIDDVIEIAKIMKPR 426 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH+GNIS+DDVIEIAKIM+PR Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120 Query: 427 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPED 564 SMAK+L+G+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P+D Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPQD 166 >ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatula] gi|217071520|gb|ACJ84120.1| unknown [Medicago truncatula] gi|217075190|gb|ACJ85955.1| unknown [Medicago truncatula] gi|355507440|gb|AES88582.1| 60S ribosomal protein L12 [Medicago truncatula] gi|388514003|gb|AFK45063.1| unknown [Medicago truncatula] Length = 166 Score = 315 bits (808), Expect = 7e-84 Identities = 157/166 (94%), Positives = 164/166 (98%) Frame = +1 Query: 67 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246 MPPK DPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT Sbjct: 1 MPPKLDPSQIVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60 Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISIDDVIEIAKIMKPR 426 VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+GNIS+DDVIEIAKIMKPR Sbjct: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMKPR 120 Query: 427 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPED 564 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P+D Sbjct: 121 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 166 >ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera] Length = 166 Score = 314 bits (804), Expect = 2e-83 Identities = 157/166 (94%), Positives = 164/166 (98%) Frame = +1 Query: 67 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60 Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISIDDVIEIAKIMKPR 426 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH+GNIS+DDVIEIAKIM+PR Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120 Query: 427 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPED 564 SMAK+L+G+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P D Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166