BLASTX nr result

ID: Coptis21_contig00000253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000253
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90271.1| nucleotide-binding site leucine-rich repeat prote...    77   1e-12
ref|XP_002867519.1| hypothetical protein ARALYDRAFT_492076 [Arab...    76   3e-12
ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Popul...    76   3e-12
ref|NP_194452.1| NB-ARC domain-containing disease resistance pro...    75   4e-12
emb|CBI32910.3| unnamed protein product [Vitis vinifera]               75   4e-12

>gb|AFC90271.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 298

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = +1

Query: 1   QKCFLYCGLYPEDYEIDTSELIEYWVMEGLVKG-SSKEDEMLRGRVILNTLKRCCMLEEV 177
           Q CFLYC LYPED+EI   ELIEYW+ EGL+    S E ++ +G  IL  L   C+LE V
Sbjct: 223 QNCFLYCSLYPEDHEIPVEELIEYWIAEGLIGDMDSVEAQLDKGHAILGKLTSSCILESV 282

Query: 178 SD---RDYVKMHDLI 213
           +D   ++ V+MHDL+
Sbjct: 283 TDISKQECVRMHDLL 297


>ref|XP_002867519.1| hypothetical protein ARALYDRAFT_492076 [Arabidopsis lyrata subsp.
           lyrata] gi|297313355|gb|EFH43778.1| hypothetical protein
           ARALYDRAFT_492076 [Arabidopsis lyrata subsp. lyrata]
          Length = 955

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = +1

Query: 7   CFLYCGLYPEDYEIDTSELIEYWVMEGLV-KGSSKEDEMLRGRVILNTLKRCCMLEEVSD 183
           CFL C L+PEDY I+ SEL+ YW+ EG + +  S+E+ M  G  I+ +LK  C+LE+ + 
Sbjct: 373 CFLLCALFPEDYSIEVSELVRYWMAEGFMEEQGSQEESMNEGIAIVESLKDYCLLEDGAR 432

Query: 184 RDYVKMHDLI 213
           RD VKMHD++
Sbjct: 433 RDTVKMHDVV 442


>ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862181|gb|EEE99687.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1570

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   QKCFLYCGLYPEDYEIDTSELIEYWVMEGLVKG-SSKEDEMLRGRVILNTLKRCCMLEEV 177
           Q+CFLYC L+PED  I+  +LI Y + EG+VKG  S+E  + +G  +LN L+  C+LE +
Sbjct: 474 QRCFLYCALFPEDSAINRLQLIRYLIDEGVVKGQKSREAGINKGHTMLNRLENVCLLERL 533

Query: 178 SDRDYVKMHDLI 213
              D+VKMHDLI
Sbjct: 534 HGGDFVKMHDLI 545


>ref|NP_194452.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|46395628|sp|O81825.1|DRL28_ARATH RecName:
           Full=Probable disease resistance protein At4g27220
           gi|3269283|emb|CAA19716.1| putative protein [Arabidopsis
           thaliana] gi|7269575|emb|CAB79577.1| putative protein
           [Arabidopsis thaliana] gi|91806732|gb|ABE66093.1|
           disease resistance protein [Arabidopsis thaliana]
           gi|332659912|gb|AEE85312.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 919

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   QKCFLYCGLYPEDYEIDTSELIEYWVMEGLVKGSSK-EDEMLRGRVILNTLKRCCMLEEV 177
           + CFL+C L+PEDY I  SELI YWV EGL+ G    ED M  G  ++  LK  C+LE+ 
Sbjct: 364 KSCFLFCALFPEDYSIKVSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDG 423

Query: 178 SDRDYVKMHDLI 213
              D VKMHD++
Sbjct: 424 DSCDTVKMHDVV 435


>emb|CBI32910.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   QKCFLYCGLYPEDYEIDTSELIEYWVMEGLV-KGSSKEDEMLRGRVILNTLKRCCMLEEV 177
           + CFLYC LYPED+ I+  EL++ W+ EGL+ K  + +D   RG  ++  LK CC+LE+ 
Sbjct: 241 KSCFLYCSLYPEDFSIEIRELVQCWLAEGLIDKQKNYDDIHNRGAAVVEYLKDCCLLEDG 300

Query: 178 SDRDYVKMHDLI 213
             +D VKMHD+I
Sbjct: 301 HLKDTVKMHDVI 312


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