BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000240
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...    93   5e-17
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...    91   3e-16
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...    85   2e-14
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
gb|ABK92768.1| unknown [Populus trichocarpa]                           85   2e-14

>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 7/198 (3%)
 Frame = -1

Query: 753 RTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTILAFDLKEERSRVIKLPGNAMVTHAPG 574
           + S EVC     LL++   +  GV +WLT    ILAFD ++E S ++  P  A+      
Sbjct: 192 KESSEVCYSDGNLLNNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPIPALEMFIDA 251

Query: 573 EGVCLGVSEANLHFISLTVVELMVWILEHDNLRPKWSVKHNKPQVEMLHPLLRGCDRRSS 394
            G C+G S+  LHFI +    ++VW L+ D    KW++KH+K Q++M+       +  + 
Sbjct: 252 PGTCIGESKGLLHFIMICEDGIIVWCLD-DYFEAKWTLKHSK-QLQMIED-----ENPNM 304

Query: 393 YLPFCPDIPNRN-------MHPYAFQDDILYMRMSWSMFSYNIKTGEYEEEELCSCSKLD 235
           +      +  R        M P+AF+D++L MR+  +++ Y+I+TG+    E+C+ + L 
Sbjct: 305 FFKLYKIMQRRRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHIETGKV--VEVCNVASLG 362

Query: 234 TAIGSANPIVVPYCKSLL 181
                 +P V+PY  SL+
Sbjct: 363 PN-PFVSPPVIPYSLSLI 379


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 2/193 (1%)
 Frame = -1

Query: 753 RTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTILAFDLKEERSRVIKLPGNAMVTHAPG 574
           + S EVC     LL +   +  GV +WLT    ILAFD ++E S ++  P  A+      
Sbjct: 192 KESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPIPALEMFIDA 251

Query: 573 EGVCLGVSEANLHFISLTVVELMVWILEHDNLRPKWSVKHNKPQVEMLHPLLRGCDRRSS 394
            G C+G S+  LHFI +    ++VW L+ D    KW++KH+K Q++M+         +  
Sbjct: 252 PGTCIGESKGLLHFIMICEDGIIVWCLD-DYFEAKWTLKHSK-QLQMIEDENPNMFFKLY 309

Query: 393 YLPFCPDIPNRN--MHPYAFQDDILYMRMSWSMFSYNIKTGEYEEEELCSCSKLDTAIGS 220
            +     +P     M P+AF+D++L MR+  +++ Y+ +TG+    E+C+ + L      
Sbjct: 310 KIMQRKRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHTETGKV--VEVCNVASLGPN-PF 366

Query: 219 ANPIVVPYCKSLL 181
            +P V+PY  SL+
Sbjct: 367 VSPPVIPYSLSLI 379


>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
 Frame = -1

Query: 753 RTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTILAFDLKEERSRVIKLPGNAMVTHAPG 574
           + SKE+C     L  ++  F  G+ +WLT G  +L+F+++ E S +I  P   +   A  
Sbjct: 187 KKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFPTIHLTAIP 246

Query: 573 EGVCLGVSEANLHFISLTVVELMVWILEHDNLRPKWSVKHN---KPQVEMLHPLLRGCDR 403
           E +C+G S   LH+I ++   L VW LE D     WS+ H+   +   E    LL     
Sbjct: 247 E-MCIGESRGRLHYIMISEDGLQVWALE-DYYDSNWSLVHSTTLEVMEEENSQLLYNTRD 304

Query: 402 RSSYLPFCPDIPNRNMHPYAFQDDILYMRMSWSMFSYNIKTGEYEEEELCSCSKLDTAIG 223
           R +       IP   M P AF+D +L MR+S  +  Y I  G  + EELC+ SKL     
Sbjct: 305 RVAQRISIDSIP--WMDPLAFKDGLLLMRVSTKIILYCI--GTRKMEELCNLSKLGRN-S 359

Query: 222 SANPIVVPYCKSL 184
              P+V+PY  +L
Sbjct: 360 IFGPLVIPYSLNL 372


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 5/196 (2%)
 Frame = -1

Query: 753 RTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTILAFDLKEERSRVIK--LPGNAMVTHA 580
           + SKEVC   + L  ++  F+ G+ +WLT G  IL F+++ E + +I   LP     T  
Sbjct: 189 KLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLPAGEFNTR- 247

Query: 579 PGEGVCLGVSEANLHFISLTVVELMVWILEHDNLRPKWSVKHNK--PQVEMLH-PLLRGC 409
                C+G SE  L+++ ++   L VW+LE D     WS+K++K   Q+E  H  ++   
Sbjct: 248 --PHACIGESEGQLYYVLISEEGLHVWVLE-DYFDSTWSLKYSKTLAQIEKEHSDIMINL 304

Query: 408 DRRSSYLPFCPDIPNRNMHPYAFQDDILYMRMSWSMFSYNIKTGEYEEEELCSCSKLDTA 229
             R        D P   M P AF+D +L +R+S +++ Y++ T +   EE+   SK   A
Sbjct: 305 YNRVMLWQRIDDRP--WMDPLAFKDGVLVVRISNTIYLYHVDTSKM--EEVGETSKFG-A 359

Query: 228 IGSANPIVVPYCKSLL 181
           +   +PIV+PY  SL+
Sbjct: 360 MSWVSPIVLPYTMSLV 375


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 5/196 (2%)
 Frame = -1

Query: 753 RTSKEVCTLPDRLLSHQCCFTNGVFYWLTAGHTILAFDLKEERSRVIK--LPGNAMVTHA 580
           + SKEVC   + L  ++  F+ G+ +WLT G  IL F+++ E + +I   LP     T  
Sbjct: 189 KLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLPAGEFNTR- 247

Query: 579 PGEGVCLGVSEANLHFISLTVVELMVWILEHDNLRPKWSVKHNK--PQVEMLH-PLLRGC 409
                C+G SE  L+++ ++   L VW+LE D     WS+K++K   Q+E  H  ++   
Sbjct: 248 --PHACIGESEGQLYYVLISEEGLHVWVLE-DYFDSTWSLKYSKTLAQIEKEHSDIMINL 304

Query: 408 DRRSSYLPFCPDIPNRNMHPYAFQDDILYMRMSWSMFSYNIKTGEYEEEELCSCSKLDTA 229
             R        D P   M P AF+D +L +R+S +++ Y++ T +   EE+   SK   A
Sbjct: 305 YNRVMLWQRIDDRP--WMDPLAFKDGVLVVRISNTIYLYHVDTSKM--EEVGETSKFG-A 359

Query: 228 IGSANPIVVPYCKSLL 181
           +   +PIV+PY  SL+
Sbjct: 360 MSWVSPIVLPYTMSLV 375