BLASTX nr result
ID: Coptis21_contig00000235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000235
(1705 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi... 816 0.0
emb|CBI31083.3| unnamed protein product [Vitis vinifera] 806 0.0
ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containi... 780 0.0
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,... 780 0.0
ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containi... 769 0.0
>ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Vitis vinifera]
Length = 846
Score = 816 bits (2109), Expect = 0.0
Identities = 388/567 (68%), Positives = 469/567 (82%)
Frame = -2
Query: 1704 FEVFTDVRGRPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRV 1525
FE F D+ + VS MEMEERIQ LAK LNG DI+MPEW+FSKM+ SA+I+F+DHS+LRV
Sbjct: 262 FEAFNDITVKKPVSKMEMEERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRV 321
Query: 1524 IQILGTLGNWRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMRE 1345
IQILG LGNWRR LQ+++WLQ RERFKS+K RYIYTAALDVLGKA+RPVEALNVF++M +
Sbjct: 322 IQILGKLGNWRRALQVLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQ 381
Query: 1344 GFSSYPDLAAYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIV 1165
SSYPDL AY CIAVTLGQAGHMKELFDVIDCMRSPP+ KFKTG +EKWDPRLEPDI+V
Sbjct: 382 QMSSYPDLVAYHCIAVTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVV 441
Query: 1164 YNAVLNACAQRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVE 985
YNAVLNAC +RKQWEGAFWVLQQ+KQQ +PS TTYGL+MEVMF C KYNLV+EFF KV+
Sbjct: 442 YNAVLNACVRRKQWEGAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQ 501
Query: 984 KITIPNSLNYKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQE 805
K +IPN+L YKVLVNTLW+EG+ DEAVLAV+DME+RGVVGSA+LYYDLARCLCSAGRCQE
Sbjct: 502 KSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQE 561
Query: 804 ALMQMDKICKVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKA 625
ALMQ++KICKVA+KPLVVTYTGLIQ CLD+G++Q+ AFIF QM EFCSPNL+TCN+MLKA
Sbjct: 562 ALMQIEKICKVANKPLVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKA 621
Query: 624 YLEHKMFEEAKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYC 445
YLEH+MFEEAK LF KML HI+ +SD + V PD Y+FNTM+D+C AE +W Y
Sbjct: 622 YLEHRMFEEAKGLFGKMLGDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYV 681
Query: 444 FQQMLHRGYNFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLE 265
+++ML G++FN KRH R+IL+A RAGK ELLETTWK L RV PPPL+KERFCMKLE
Sbjct: 682 YERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKSLAGEGRV-PPPLIKERFCMKLE 740
Query: 264 KNDYDTAISSISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNE 85
K D A+SSI+ H NEL+ + FS++ WL+L N RFQ +++ L H+ S+ +A +
Sbjct: 741 KGDCAAAVSSITGHHMNELQ-EPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARAD 799
Query: 84 QPLPAIKNLISSCKEYIRTQTLAAEIN 4
P P ++NL++SCKE++RT + ++
Sbjct: 800 MPNPVLQNLLASCKEFLRTHMTVSSVS 826
>emb|CBI31083.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 806 bits (2083), Expect = 0.0
Identities = 382/552 (69%), Positives = 461/552 (83%)
Frame = -2
Query: 1659 MEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRVIQILGTLGNWRRVLQ 1480
MEMEERIQ LAK LNG DI+MPEW+FSKM+ SA+I+F+DHS+LRVIQILG LGNWRR LQ
Sbjct: 1 MEMEERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQ 60
Query: 1479 IIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMREGFSSYPDLAAYRCIA 1300
+++WLQ RERFKS+K RYIYTAALDVLGKA+RPVEALNVF++M + SSYPDL AY CIA
Sbjct: 61 VLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIA 120
Query: 1299 VTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIVYNAVLNACAQRKQWE 1120
VTLGQAGHMKELFDVIDCMRSPP+ KFKTG +EKWDPRLEPDI+VYNAVLNAC +RKQWE
Sbjct: 121 VTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWE 180
Query: 1119 GAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVEKITIPNSLNYKVLVN 940
GAFWVLQQ+KQQ +PS TTYGL+MEVMF C KYNLV+EFF KV+K +IPN+L YKVLVN
Sbjct: 181 GAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVN 240
Query: 939 TLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQEALMQMDKICKVAHKP 760
TLW+EG+ DEAVLAV+DME+RGVVGSA+LYYDLARCLCSAGRCQEALMQ++KICKVA+KP
Sbjct: 241 TLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKVANKP 300
Query: 759 LVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKAYLEHKMFEEAKDLFQ 580
LVVTYTGLIQ CLD+G++Q+ AFIF QM EFCSPNL+TCN+MLKAYLEH+MFEEAK LF
Sbjct: 301 LVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFG 360
Query: 579 KMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYCFQQMLHRGYNFNTKR 400
KML HI+ +SD + V PD Y+FNTM+D+C AE +W Y +++ML G++FN KR
Sbjct: 361 KMLGDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKR 420
Query: 399 HQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLEKNDYDTAISSISSHP 220
H R+IL+A RAGK ELLETTWK L RV PPPL+KERFCMKLEK D A+SSI+ H
Sbjct: 421 HLRIILDASRAGKEELLETTWKSLAGEGRV-PPPLIKERFCMKLEKGDCAAAVSSITGHH 479
Query: 219 PNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNEQPLPAIKNLISSCKE 40
NEL+ + FS++ WL+L N RFQ +++ L H+ S+ +A + P P ++NL++SCKE
Sbjct: 480 MNELQ-EPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARADMPNPVLQNLLASCKE 538
Query: 39 YIRTQTLAAEIN 4
++RT + ++
Sbjct: 539 FLRTHMTVSSVS 550
>ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Cucumis sativus]
Length = 902
Score = 780 bits (2014), Expect = 0.0
Identities = 378/565 (66%), Positives = 460/565 (81%)
Frame = -2
Query: 1704 FEVFTDVRGRPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRV 1525
F+ F D+ +PRVS MEMEERIQ L+K LNG DI+MPEW+FS+M+ SA+I++SDHS+LRV
Sbjct: 335 FDAF-DIMDKPRVSKMEMEERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRV 393
Query: 1524 IQILGTLGNWRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMRE 1345
IQ+LG LGNWRRVLQII+WLQ RERFKS+K R+IYT ALDVLGKA+RPVEALNVFH+M+E
Sbjct: 394 IQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQE 453
Query: 1344 GFSSYPDLAAYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIV 1165
FSSYPDL AY IAVTLGQAG+M+ELFDVID MRSPP+ KFKTG++EKWDPRL+PDI++
Sbjct: 454 HFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVI 513
Query: 1164 YNAVLNACAQRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVE 985
YNAVLNAC +RK EGAFWVLQ++K+Q LQPS++TYGL+MEVM C KYNLV+EFF+KV+
Sbjct: 514 YNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQ 573
Query: 984 KITIPNSLNYKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQE 805
K +IPN+L YKVLVNTLWKEG+ DEAVLA+++ME RG+VGSA+LYYD ARCLCSAGRC+E
Sbjct: 574 KSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKE 633
Query: 804 ALMQMDKICKVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKA 625
ALMQM+KICKVA+KPLVVTYTGLIQACLD+ +Q +IF M+ FCSPNLVT NI+LK
Sbjct: 634 ALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKG 693
Query: 624 YLEHKMFEEAKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYC 445
YLEH MFEEA++LFQ + + +I+ SD ++ V PD Y FNTMLD+ AE +WD F+Y
Sbjct: 694 YLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYF 753
Query: 444 FQQMLHRGYNFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLE 265
+ QM GY+FN KRH RMILEA R GK ELLETTWKHL +A+R PPPPL+KERFCMKL
Sbjct: 754 YNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLA 813
Query: 264 KNDYDTAISSISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNE 85
+ DY A+SSI SH N FSE WL+LLK RF +DT+ L HK+ +++ NE
Sbjct: 814 RGDYSEALSSIWSH--NSGDAHHFSESAWLNLLKEK--RFPRDTVIELIHKVGMVLTRNE 869
Query: 84 QPLPAIKNLISSCKEYIRTQTLAAE 10
P P KNL+ SCKE+ RT+ A+
Sbjct: 870 SPNPVFKNLLLSCKEFCRTRISLAD 894
>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 856
Score = 780 bits (2013), Expect = 0.0
Identities = 370/564 (65%), Positives = 464/564 (82%)
Frame = -2
Query: 1701 EVFTDVRGRPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRVI 1522
E + + GRP+ S E+E+R+Q LAK LNG DI+MPEW+FSKM+ SARIK++DHSVLR+I
Sbjct: 280 EEYNNFTGRPQNSKREVEDRLQKLAKCLNGADIDMPEWMFSKMMRSARIKYTDHSVLRII 339
Query: 1521 QILGTLGNWRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMREG 1342
QILG LGNWRRVLQ+I+WLQ RERFKS++ R IYT AL+VLGKA+RPVEALNVFH M++
Sbjct: 340 QILGKLGNWRRVLQVIEWLQMRERFKSHRLRNIYTTALNVLGKAQRPVEALNVFHVMQQQ 399
Query: 1341 FSSYPDLAAYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIVY 1162
SSYPDL AY CIAVTLGQAGHM++LFDVID MRSPP+ KFK + KWDPRLEPDI+VY
Sbjct: 400 MSSYPDLVAYHCIAVTLGQAGHMEQLFDVIDSMRSPPKKKFKMAAVHKWDPRLEPDIVVY 459
Query: 1161 NAVLNACAQRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVEK 982
NAVLNAC QRKQWEGAFWVLQQ+KQQGLQPS+TTYGLIMEVMFAC KYNLV+EFF+KV+K
Sbjct: 460 NAVLNACVQRKQWEGAFWVLQQLKQQGLQPSTTTYGLIMEVMFACGKYNLVHEFFRKVQK 519
Query: 981 ITIPNSLNYKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQEA 802
+IPN+L YKVLVNTLW+EG+ DEAVLAV++MERRG+VG A+LYYDLARCLCSAGRCQEA
Sbjct: 520 SSIPNALVYKVLVNTLWREGKTDEAVLAVEEMERRGIVGFAALYYDLARCLCSAGRCQEA 579
Query: 801 LMQMDKICKVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKAY 622
L+Q++KIC+VA+KPLVVTYTGLIQACLD+G++ + +IF QM+ FCSPNLVT N+MLKAY
Sbjct: 580 LLQIEKICRVANKPLVVTYTGLIQACLDSGNIHNAVYIFNQMKHFCSPNLVTFNVMLKAY 639
Query: 621 LEHKMFEEAKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYCF 442
EH +FE+AK+LF KM + S HI D K V PD Y+FNTMLD+C +E WD F Y +
Sbjct: 640 FEHGLFEDAKELFHKMTEDSNHIRGNHDYKVRVIPDIYTFNTMLDACISEKSWDDFEYVY 699
Query: 441 QQMLHRGYNFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLEK 262
++MLH G++FN KRH RMIL+A RAGKVE LE TWKHL RA+R+PPP L+KERF + LEK
Sbjct: 700 RRMLHHGFHFNGKRHLRMILDASRAGKVEPLEMTWKHLARADRIPPPNLIKERFRIMLEK 759
Query: 261 NDYDTAISSISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNEQ 82
+D +A++ I+++P E AF + WL+L K N ++ ++DT+ L H++S+LV
Sbjct: 760 DDCKSALACITTNPMGE--SPAFHKVAWLNLFKENAEQIRRDTLIQLKHEVSMLV---NP 814
Query: 81 PLPAIKNLISSCKEYIRTQTLAAE 10
P P ++NL++SC +++ +Q + +E
Sbjct: 815 PDPVLQNLLASCNDFLNSQVIVSE 838
>ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Glycine max]
Length = 893
Score = 769 bits (1985), Expect = 0.0
Identities = 363/554 (65%), Positives = 454/554 (81%)
Frame = -2
Query: 1677 RPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRVIQILGTLGN 1498
+ + S EMEE+IQ LA LNG DIN+PEW+FSKMI SAR+KF+D+++ R+I ILG LGN
Sbjct: 333 KSQFSHKEMEEKIQKLANSLNGADINLPEWMFSKMIRSARLKFNDYAITRIIIILGKLGN 392
Query: 1497 WRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMREGFSSYPDLA 1318
WRRV+Q+I+WLQ RERFKS+K R+IYTAALD LGK++RPVEALN+FH+M++ SSYPDL
Sbjct: 393 WRRVIQVIEWLQKRERFKSHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLV 452
Query: 1317 AYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIVYNAVLNACA 1138
AY IAVTLGQAGHMKELFDVID MRSPP+ KFKTG+ E WDPRLEPDI+VY+AVLNAC
Sbjct: 453 AYHSIAVTLGQAGHMKELFDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACV 512
Query: 1137 QRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVEKITIPNSLN 958
+RKQWEGAFWVLQQ+K+QG PS+TTYGL+MEVM +C KYNLV+EFF+K++K PNSL
Sbjct: 513 RRKQWEGAFWVLQQLKKQGQPPSATTYGLVMEVMLSCGKYNLVHEFFRKLQKSFSPNSLT 572
Query: 957 YKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQEALMQMDKIC 778
Y+VLVNTLW+EG+ DEA+LAV++MERRG+VGSASLYYDLARCL +AGR EAL Q+DKIC
Sbjct: 573 YRVLVNTLWQEGKPDEAILAVQEMERRGIVGSASLYYDLARCLSAAGRSHEALKQIDKIC 632
Query: 777 KVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKAYLEHKMFEE 598
KVA+KPLVVTYTGL+QA LDAG++QDGA+IF++M+E C+PNLVTCNI+LKAYLEH MF+E
Sbjct: 633 KVANKPLVVTYTGLMQASLDAGNIQDGAYIFEKMKEICAPNLVTCNIILKAYLEHGMFQE 692
Query: 597 AKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYCFQQMLHRGY 418
AK LF++M + + + +D K V PD+YSFNTMLD+C AE +WDYF + +Q+ML+ GY
Sbjct: 693 AKVLFEQMSENANRLRGNTDYKMLVVPDTYSFNTMLDACVAEKRWDYFDHVYQRMLYHGY 752
Query: 417 NFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLEKNDYDTAIS 238
+FN KRH RMILEA +AGK LE TWKHL +R+PP PL+KERFC KLEK+DY A++
Sbjct: 753 HFNPKRHLRMILEASKAGKERPLEITWKHLTDTDRIPPAPLIKERFCAKLEKDDYVAALT 812
Query: 237 SISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNEQPLPAIKNL 58
I ++PP + LQ FS+ WL L K N+ RFQKDTI L ++ S +V+ N P P ++ L
Sbjct: 813 CIINNPPKD--LQPFSKSSWLKLFKENSQRFQKDTIVGLMNEASNIVSNNSFPNPTLEYL 870
Query: 57 ISSCKEYIRTQTLA 16
I SCKE++ L+
Sbjct: 871 IQSCKEFLFATVLS 884