BLASTX nr result
ID: Coptis21_contig00000235
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000235 (1705 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi... 816 0.0 emb|CBI31083.3| unnamed protein product [Vitis vinifera] 806 0.0 ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containi... 780 0.0 ref|XP_002533784.1| pentatricopeptide repeat-containing protein,... 780 0.0 ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containi... 769 0.0 >ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like [Vitis vinifera] Length = 846 Score = 816 bits (2109), Expect = 0.0 Identities = 388/567 (68%), Positives = 469/567 (82%) Frame = -2 Query: 1704 FEVFTDVRGRPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRV 1525 FE F D+ + VS MEMEERIQ LAK LNG DI+MPEW+FSKM+ SA+I+F+DHS+LRV Sbjct: 262 FEAFNDITVKKPVSKMEMEERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRV 321 Query: 1524 IQILGTLGNWRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMRE 1345 IQILG LGNWRR LQ+++WLQ RERFKS+K RYIYTAALDVLGKA+RPVEALNVF++M + Sbjct: 322 IQILGKLGNWRRALQVLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQ 381 Query: 1344 GFSSYPDLAAYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIV 1165 SSYPDL AY CIAVTLGQAGHMKELFDVIDCMRSPP+ KFKTG +EKWDPRLEPDI+V Sbjct: 382 QMSSYPDLVAYHCIAVTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVV 441 Query: 1164 YNAVLNACAQRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVE 985 YNAVLNAC +RKQWEGAFWVLQQ+KQQ +PS TTYGL+MEVMF C KYNLV+EFF KV+ Sbjct: 442 YNAVLNACVRRKQWEGAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQ 501 Query: 984 KITIPNSLNYKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQE 805 K +IPN+L YKVLVNTLW+EG+ DEAVLAV+DME+RGVVGSA+LYYDLARCLCSAGRCQE Sbjct: 502 KSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQE 561 Query: 804 ALMQMDKICKVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKA 625 ALMQ++KICKVA+KPLVVTYTGLIQ CLD+G++Q+ AFIF QM EFCSPNL+TCN+MLKA Sbjct: 562 ALMQIEKICKVANKPLVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKA 621 Query: 624 YLEHKMFEEAKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYC 445 YLEH+MFEEAK LF KML HI+ +SD + V PD Y+FNTM+D+C AE +W Y Sbjct: 622 YLEHRMFEEAKGLFGKMLGDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYV 681 Query: 444 FQQMLHRGYNFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLE 265 +++ML G++FN KRH R+IL+A RAGK ELLETTWK L RV PPPL+KERFCMKLE Sbjct: 682 YERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKSLAGEGRV-PPPLIKERFCMKLE 740 Query: 264 KNDYDTAISSISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNE 85 K D A+SSI+ H NEL+ + FS++ WL+L N RFQ +++ L H+ S+ +A + Sbjct: 741 KGDCAAAVSSITGHHMNELQ-EPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARAD 799 Query: 84 QPLPAIKNLISSCKEYIRTQTLAAEIN 4 P P ++NL++SCKE++RT + ++ Sbjct: 800 MPNPVLQNLLASCKEFLRTHMTVSSVS 826 >emb|CBI31083.3| unnamed protein product [Vitis vinifera] Length = 647 Score = 806 bits (2083), Expect = 0.0 Identities = 382/552 (69%), Positives = 461/552 (83%) Frame = -2 Query: 1659 MEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRVIQILGTLGNWRRVLQ 1480 MEMEERIQ LAK LNG DI+MPEW+FSKM+ SA+I+F+DHS+LRVIQILG LGNWRR LQ Sbjct: 1 MEMEERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQ 60 Query: 1479 IIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMREGFSSYPDLAAYRCIA 1300 +++WLQ RERFKS+K RYIYTAALDVLGKA+RPVEALNVF++M + SSYPDL AY CIA Sbjct: 61 VLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIA 120 Query: 1299 VTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIVYNAVLNACAQRKQWE 1120 VTLGQAGHMKELFDVIDCMRSPP+ KFKTG +EKWDPRLEPDI+VYNAVLNAC +RKQWE Sbjct: 121 VTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWE 180 Query: 1119 GAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVEKITIPNSLNYKVLVN 940 GAFWVLQQ+KQQ +PS TTYGL+MEVMF C KYNLV+EFF KV+K +IPN+L YKVLVN Sbjct: 181 GAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVN 240 Query: 939 TLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQEALMQMDKICKVAHKP 760 TLW+EG+ DEAVLAV+DME+RGVVGSA+LYYDLARCLCSAGRCQEALMQ++KICKVA+KP Sbjct: 241 TLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKVANKP 300 Query: 759 LVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKAYLEHKMFEEAKDLFQ 580 LVVTYTGLIQ CLD+G++Q+ AFIF QM EFCSPNL+TCN+MLKAYLEH+MFEEAK LF Sbjct: 301 LVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFG 360 Query: 579 KMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYCFQQMLHRGYNFNTKR 400 KML HI+ +SD + V PD Y+FNTM+D+C AE +W Y +++ML G++FN KR Sbjct: 361 KMLGDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKR 420 Query: 399 HQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLEKNDYDTAISSISSHP 220 H R+IL+A RAGK ELLETTWK L RV PPPL+KERFCMKLEK D A+SSI+ H Sbjct: 421 HLRIILDASRAGKEELLETTWKSLAGEGRV-PPPLIKERFCMKLEKGDCAAAVSSITGHH 479 Query: 219 PNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNEQPLPAIKNLISSCKE 40 NEL+ + FS++ WL+L N RFQ +++ L H+ S+ +A + P P ++NL++SCKE Sbjct: 480 MNELQ-EPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARADMPNPVLQNLLASCKE 538 Query: 39 YIRTQTLAAEIN 4 ++RT + ++ Sbjct: 539 FLRTHMTVSSVS 550 >ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like [Cucumis sativus] Length = 902 Score = 780 bits (2014), Expect = 0.0 Identities = 378/565 (66%), Positives = 460/565 (81%) Frame = -2 Query: 1704 FEVFTDVRGRPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRV 1525 F+ F D+ +PRVS MEMEERIQ L+K LNG DI+MPEW+FS+M+ SA+I++SDHS+LRV Sbjct: 335 FDAF-DIMDKPRVSKMEMEERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRV 393 Query: 1524 IQILGTLGNWRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMRE 1345 IQ+LG LGNWRRVLQII+WLQ RERFKS+K R+IYT ALDVLGKA+RPVEALNVFH+M+E Sbjct: 394 IQVLGKLGNWRRVLQIIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQE 453 Query: 1344 GFSSYPDLAAYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIV 1165 FSSYPDL AY IAVTLGQAG+M+ELFDVID MRSPP+ KFKTG++EKWDPRL+PDI++ Sbjct: 454 HFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVI 513 Query: 1164 YNAVLNACAQRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVE 985 YNAVLNAC +RK EGAFWVLQ++K+Q LQPS++TYGL+MEVM C KYNLV+EFF+KV+ Sbjct: 514 YNAVLNACVKRKNLEGAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQ 573 Query: 984 KITIPNSLNYKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQE 805 K +IPN+L YKVLVNTLWKEG+ DEAVLA+++ME RG+VGSA+LYYD ARCLCSAGRC+E Sbjct: 574 KSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKE 633 Query: 804 ALMQMDKICKVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKA 625 ALMQM+KICKVA+KPLVVTYTGLIQACLD+ +Q +IF M+ FCSPNLVT NI+LK Sbjct: 634 ALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKG 693 Query: 624 YLEHKMFEEAKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYC 445 YLEH MFEEA++LFQ + + +I+ SD ++ V PD Y FNTMLD+ AE +WD F+Y Sbjct: 694 YLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYF 753 Query: 444 FQQMLHRGYNFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLE 265 + QM GY+FN KRH RMILEA R GK ELLETTWKHL +A+R PPPPL+KERFCMKL Sbjct: 754 YNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLA 813 Query: 264 KNDYDTAISSISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNE 85 + DY A+SSI SH N FSE WL+LLK RF +DT+ L HK+ +++ NE Sbjct: 814 RGDYSEALSSIWSH--NSGDAHHFSESAWLNLLKEK--RFPRDTVIELIHKVGMVLTRNE 869 Query: 84 QPLPAIKNLISSCKEYIRTQTLAAE 10 P P KNL+ SCKE+ RT+ A+ Sbjct: 870 SPNPVFKNLLLSCKEFCRTRISLAD 894 >ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223526285|gb|EEF28597.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 856 Score = 780 bits (2013), Expect = 0.0 Identities = 370/564 (65%), Positives = 464/564 (82%) Frame = -2 Query: 1701 EVFTDVRGRPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRVI 1522 E + + GRP+ S E+E+R+Q LAK LNG DI+MPEW+FSKM+ SARIK++DHSVLR+I Sbjct: 280 EEYNNFTGRPQNSKREVEDRLQKLAKCLNGADIDMPEWMFSKMMRSARIKYTDHSVLRII 339 Query: 1521 QILGTLGNWRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMREG 1342 QILG LGNWRRVLQ+I+WLQ RERFKS++ R IYT AL+VLGKA+RPVEALNVFH M++ Sbjct: 340 QILGKLGNWRRVLQVIEWLQMRERFKSHRLRNIYTTALNVLGKAQRPVEALNVFHVMQQQ 399 Query: 1341 FSSYPDLAAYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIVY 1162 SSYPDL AY CIAVTLGQAGHM++LFDVID MRSPP+ KFK + KWDPRLEPDI+VY Sbjct: 400 MSSYPDLVAYHCIAVTLGQAGHMEQLFDVIDSMRSPPKKKFKMAAVHKWDPRLEPDIVVY 459 Query: 1161 NAVLNACAQRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVEK 982 NAVLNAC QRKQWEGAFWVLQQ+KQQGLQPS+TTYGLIMEVMFAC KYNLV+EFF+KV+K Sbjct: 460 NAVLNACVQRKQWEGAFWVLQQLKQQGLQPSTTTYGLIMEVMFACGKYNLVHEFFRKVQK 519 Query: 981 ITIPNSLNYKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQEA 802 +IPN+L YKVLVNTLW+EG+ DEAVLAV++MERRG+VG A+LYYDLARCLCSAGRCQEA Sbjct: 520 SSIPNALVYKVLVNTLWREGKTDEAVLAVEEMERRGIVGFAALYYDLARCLCSAGRCQEA 579 Query: 801 LMQMDKICKVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKAY 622 L+Q++KIC+VA+KPLVVTYTGLIQACLD+G++ + +IF QM+ FCSPNLVT N+MLKAY Sbjct: 580 LLQIEKICRVANKPLVVTYTGLIQACLDSGNIHNAVYIFNQMKHFCSPNLVTFNVMLKAY 639 Query: 621 LEHKMFEEAKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYCF 442 EH +FE+AK+LF KM + S HI D K V PD Y+FNTMLD+C +E WD F Y + Sbjct: 640 FEHGLFEDAKELFHKMTEDSNHIRGNHDYKVRVIPDIYTFNTMLDACISEKSWDDFEYVY 699 Query: 441 QQMLHRGYNFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLEK 262 ++MLH G++FN KRH RMIL+A RAGKVE LE TWKHL RA+R+PPP L+KERF + LEK Sbjct: 700 RRMLHHGFHFNGKRHLRMILDASRAGKVEPLEMTWKHLARADRIPPPNLIKERFRIMLEK 759 Query: 261 NDYDTAISSISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNEQ 82 +D +A++ I+++P E AF + WL+L K N ++ ++DT+ L H++S+LV Sbjct: 760 DDCKSALACITTNPMGE--SPAFHKVAWLNLFKENAEQIRRDTLIQLKHEVSMLV---NP 814 Query: 81 PLPAIKNLISSCKEYIRTQTLAAE 10 P P ++NL++SC +++ +Q + +E Sbjct: 815 PDPVLQNLLASCNDFLNSQVIVSE 838 >ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like [Glycine max] Length = 893 Score = 769 bits (1985), Expect = 0.0 Identities = 363/554 (65%), Positives = 454/554 (81%) Frame = -2 Query: 1677 RPRVSWMEMEERIQNLAKWLNGTDINMPEWLFSKMIHSARIKFSDHSVLRVIQILGTLGN 1498 + + S EMEE+IQ LA LNG DIN+PEW+FSKMI SAR+KF+D+++ R+I ILG LGN Sbjct: 333 KSQFSHKEMEEKIQKLANSLNGADINLPEWMFSKMIRSARLKFNDYAITRIIIILGKLGN 392 Query: 1497 WRRVLQIIQWLQSRERFKSYKTRYIYTAALDVLGKAKRPVEALNVFHSMREGFSSYPDLA 1318 WRRV+Q+I+WLQ RERFKS+K R+IYTAALD LGK++RPVEALN+FH+M++ SSYPDL Sbjct: 393 WRRVIQVIEWLQKRERFKSHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLV 452 Query: 1317 AYRCIAVTLGQAGHMKELFDVIDCMRSPPQHKFKTGLIEKWDPRLEPDIIVYNAVLNACA 1138 AY IAVTLGQAGHMKELFDVID MRSPP+ KFKTG+ E WDPRLEPDI+VY+AVLNAC Sbjct: 453 AYHSIAVTLGQAGHMKELFDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACV 512 Query: 1137 QRKQWEGAFWVLQQIKQQGLQPSSTTYGLIMEVMFACEKYNLVYEFFKKVEKITIPNSLN 958 +RKQWEGAFWVLQQ+K+QG PS+TTYGL+MEVM +C KYNLV+EFF+K++K PNSL Sbjct: 513 RRKQWEGAFWVLQQLKKQGQPPSATTYGLVMEVMLSCGKYNLVHEFFRKLQKSFSPNSLT 572 Query: 957 YKVLVNTLWKEGQADEAVLAVKDMERRGVVGSASLYYDLARCLCSAGRCQEALMQMDKIC 778 Y+VLVNTLW+EG+ DEA+LAV++MERRG+VGSASLYYDLARCL +AGR EAL Q+DKIC Sbjct: 573 YRVLVNTLWQEGKPDEAILAVQEMERRGIVGSASLYYDLARCLSAAGRSHEALKQIDKIC 632 Query: 777 KVAHKPLVVTYTGLIQACLDAGSVQDGAFIFKQMQEFCSPNLVTCNIMLKAYLEHKMFEE 598 KVA+KPLVVTYTGL+QA LDAG++QDGA+IF++M+E C+PNLVTCNI+LKAYLEH MF+E Sbjct: 633 KVANKPLVVTYTGLMQASLDAGNIQDGAYIFEKMKEICAPNLVTCNIILKAYLEHGMFQE 692 Query: 597 AKDLFQKMLDGSCHITKRSDCKNTVTPDSYSFNTMLDSCAAENKWDYFTYCFQQMLHRGY 418 AK LF++M + + + +D K V PD+YSFNTMLD+C AE +WDYF + +Q+ML+ GY Sbjct: 693 AKVLFEQMSENANRLRGNTDYKMLVVPDTYSFNTMLDACVAEKRWDYFDHVYQRMLYHGY 752 Query: 417 NFNTKRHQRMILEACRAGKVELLETTWKHLVRANRVPPPPLVKERFCMKLEKNDYDTAIS 238 +FN KRH RMILEA +AGK LE TWKHL +R+PP PL+KERFC KLEK+DY A++ Sbjct: 753 HFNPKRHLRMILEASKAGKERPLEITWKHLTDTDRIPPAPLIKERFCAKLEKDDYVAALT 812 Query: 237 SISSHPPNELRLQAFSEKGWLDLLKANTDRFQKDTITSLTHKLSILVAGNEQPLPAIKNL 58 I ++PP + LQ FS+ WL L K N+ RFQKDTI L ++ S +V+ N P P ++ L Sbjct: 813 CIINNPPKD--LQPFSKSSWLKLFKENSQRFQKDTIVGLMNEASNIVSNNSFPNPTLEYL 870 Query: 57 ISSCKEYIRTQTLA 16 I SCKE++ L+ Sbjct: 871 IQSCKEFLFATVLS 884