BLASTX nr result

ID: Coptis21_contig00000234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000234
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282335.1| PREDICTED: uncharacterized protein LOC100244...   168   2e-39
ref|XP_003521405.1| PREDICTED: uncharacterized protein LOC100792...   167   4e-39
ref|NP_200888.2| heavy metal transport/detoxification domain-con...   166   8e-39
ref|NP_001190582.1| heavy metal transport/detoxification domain-...   166   8e-39
ref|XP_002866395.1| hypothetical protein ARALYDRAFT_496228 [Arab...   166   8e-39

>ref|XP_002282335.1| PREDICTED: uncharacterized protein LOC100244817 [Vitis vinifera]
           gi|297741643|emb|CBI32775.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score =  168 bits (425), Expect = 2e-39
 Identities = 95/195 (48%), Positives = 120/195 (61%), Gaps = 18/195 (9%)
 Frame = -3

Query: 843 DKKGD-GVKKEDIKTPTVLKVKMHCDGCAKKVIRSVKRIEGVEGVMADSSTSKVTVFGKI 667
           +KK D G KK +   P V K+ +HC+GCAKKV R V++ +GVE V  DS+++KVTV GK 
Sbjct: 16  EKKADAGEKKAEGPAPAVFKIDLHCEGCAKKVRRYVRKFDGVEDVKVDSASNKVTVTGKA 75

Query: 666 DPLKLREKVELNTKKKVELISPIPKKD-KDAGETXXXXXXXXXXXXXPQ----------- 523
           DP+KLREK+E  TKK+V LISPIPKK+ KD G                +           
Sbjct: 76  DPVKLREKLEEKTKKEVALISPIPKKEAKDGGAADKKSDDKSEKKSDEKKSDEKKADEKK 135

Query: 522 -----VTTATFKTRLHCEGCTQKIHKSISKIKGVEAVTIDKLQDLVTVKGTMDVKDLPSY 358
                V+T   K RLHC+GC  KI K ISK KGV+ VT+D  +DLVTV G MDVK+L  Y
Sbjct: 136 PKETPVSTVVLKIRLHCDGCIHKIKKIISKSKGVKTVTVDSQKDLVTVTGPMDVKELIPY 195

Query: 357 LQKKHKRTVEFFLPK 313
           L++K +RTVE   PK
Sbjct: 196 LKEKLRRTVEIVSPK 210



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
 Frame = -3

Query: 861 ETNKNQDKKGDGVKKEDIKTP-------TVLKVKMHCDGCAKKVIRSVKRIEGVEGVMAD 703
           ++ K  D+K    KK D K P        VLK+++HCDGC  K+ + + + +GV+ V  D
Sbjct: 116 KSEKKSDEKKSDEKKADEKKPKETPVSTVVLKIRLHCDGCIHKIKKIISKSKGVKTVTVD 175

Query: 702 SSTSKVTVFGKIDPLKLREKVELNTKKKVELISPIPKKDKDAGE 571
           S    VTV G +D  +L   ++   ++ VE++S  PKKD   G+
Sbjct: 176 SQKDLVTVTGPMDVKELIPYLKEKLRRTVEIVS--PKKDDAGGD 217


>ref|XP_003521405.1| PREDICTED: uncharacterized protein LOC100792662 [Glycine max]
          Length = 329

 Score =  167 bits (422), Expect = 4e-39
 Identities = 90/188 (47%), Positives = 116/188 (61%), Gaps = 7/188 (3%)
 Frame = -3

Query: 855 NKNQDKKGDGVKKEDIKTPTVLKVKMHCDGCAKKVIRSVKRIEGVEGVMADSSTSKVTVF 676
           N+   K   G K+ D + P VLK+ MHC+GC KK+ R+V+  +GVE V  D S+ K+TV 
Sbjct: 10  NEGDKKPESGAKQNDGRLPVVLKLDMHCEGCVKKIKRAVRHFDGVEDVKTDLSSKKLTVI 69

Query: 675 GKIDPLKLREKVELNTKKKVELISPIPKKD-------KDAGETXXXXXXXXXXXXXPQVT 517
           GK+DP K+R+K+   TKKKVELISP PKKD       ++                 P+ +
Sbjct: 70  GKVDPAKVRDKLAEKTKKKVELISPQPKKDSAGDKPPEEKKSEEKKPEDKKAEEKTPKES 129

Query: 516 TATFKTRLHCEGCTQKIHKSISKIKGVEAVTIDKLQDLVTVKGTMDVKDLPSYLQKKHKR 337
           T   K RLHCEGC QKI K I K KGVE+V I+  +DLV+VKGTMDVK++  YL +K KR
Sbjct: 130 TVVLKIRLHCEGCIQKIRKIILKTKGVESVNIEGGKDLVSVKGTMDVKEIVPYLNEKLKR 189

Query: 336 TVEFFLPK 313
            VE   PK
Sbjct: 190 NVEVVPPK 197


>ref|NP_200888.2| heavy metal transport/detoxification domain-containing protein
           [Arabidopsis thaliana] gi|10176908|dbj|BAB10101.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|28416657|gb|AAO42859.1| At5g60800 [Arabidopsis
           thaliana] gi|110735953|dbj|BAE99951.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332009995|gb|AED97378.1| heavy metal
           transport/detoxification domain-containing protein
           [Arabidopsis thaliana]
          Length = 283

 Score =  166 bits (419), Expect = 8e-39
 Identities = 105/275 (38%), Positives = 137/275 (49%), Gaps = 17/275 (6%)
 Frame = -3

Query: 849 NQDKKGDGVKKEDIKTPTV-LKVKMHCDGCAKKVIRSVKRIEGVEGVMADSSTSKVTVFG 673
           N+ K GD  KK +  + TV LKV MHC+GCA ++++ V+  +GVE V ++S+T K+TV G
Sbjct: 10  NKKKGGDNKKKNETPSITVVLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTG 69

Query: 672 KIDPLKLREKVELNTKKKVELISPIPKK------------DKDAGETXXXXXXXXXXXXX 529
            +DP+KLREK+E  TKKKV+L+SP PKK            DK   E              
Sbjct: 70  ALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKNKNDEDKKKSEEKKKPDNNDKKPKE 129

Query: 528 PQVTTATFKTRLHCEGCTQKIHKSISKIKGVEAVTIDKLQDLVTVKGTMDVKDLPSYLQK 349
             VTTA  K   HC+GC  KI K+++K KGV  +T+DK ++L+TVKGTMDVK L   L +
Sbjct: 130 TPVTTAVLKLNFHCQGCIGKIQKTVTKTKGVNGLTMDKEKNLLTVKGTMDVKKLVEILSE 189

Query: 348 KHKRTVEFFLPKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPEESMANRMDXXXXXX 169
           K KR VE   PK                                  E + N M+      
Sbjct: 190 KLKRAVEIVPPKKEKDKENGNENGEKKKGGGGDGGGKEKTGNKGGGEGV-NMMEYMAAQP 248

Query: 168 XXXXXXXXXYRVDPYHVP----PPQMFSDENPNAC 76
                        PY  P     PQ+FSDENPNAC
Sbjct: 249 AYGYGYYPG---GPYGYPIQAHAPQIFSDENPNAC 280



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
 Frame = -3

Query: 861 ETNKNQDKK----GDGVKKEDIKTPTVLKVKMHCDGCAKKVIRSVKRIEGVEGVMADSST 694
           +  K+++KK     D   KE   T  VLK+  HC GC  K+ ++V + +GV G+  D   
Sbjct: 110 DKKKSEEKKKPDNNDKKPKETPVTTAVLKLNFHCQGCIGKIQKTVTKTKGVNGLTMDKEK 169

Query: 693 SKVTVFGKIDPLKLREKVELNTKKKVELISPIPKKDKDAG 574
           + +TV G +D  KL E +    K+ VE++ P  +KDK+ G
Sbjct: 170 NLLTVKGTMDVKKLVEILSEKLKRAVEIVPPKKEKDKENG 209


>ref|NP_001190582.1| heavy metal transport/detoxification domain-containing protein
           [Arabidopsis thaliana] gi|332009996|gb|AED97379.1| heavy
           metal transport/detoxification domain-containing protein
           [Arabidopsis thaliana]
          Length = 302

 Score =  166 bits (419), Expect = 8e-39
 Identities = 105/275 (38%), Positives = 137/275 (49%), Gaps = 17/275 (6%)
 Frame = -3

Query: 849 NQDKKGDGVKKEDIKTPTV-LKVKMHCDGCAKKVIRSVKRIEGVEGVMADSSTSKVTVFG 673
           N+ K GD  KK +  + TV LKV MHC+GCA ++++ V+  +GVE V ++S+T K+TV G
Sbjct: 10  NKKKGGDNKKKNETPSITVVLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTG 69

Query: 672 KIDPLKLREKVELNTKKKVELISPIPKK------------DKDAGETXXXXXXXXXXXXX 529
            +DP+KLREK+E  TKKKV+L+SP PKK            DK   E              
Sbjct: 70  ALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKNKNDEDKKKSEEKKKPDNNDKKPKE 129

Query: 528 PQVTTATFKTRLHCEGCTQKIHKSISKIKGVEAVTIDKLQDLVTVKGTMDVKDLPSYLQK 349
             VTTA  K   HC+GC  KI K+++K KGV  +T+DK ++L+TVKGTMDVK L   L +
Sbjct: 130 TPVTTAVLKLNFHCQGCIGKIQKTVTKTKGVNGLTMDKEKNLLTVKGTMDVKKLVEILSE 189

Query: 348 KHKRTVEFFLPKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPEESMANRMDXXXXXX 169
           K KR VE   PK                                  E + N M+      
Sbjct: 190 KLKRAVEIVPPKKEKDKENGNENGEKKKGGGGDGGGKEKTGNKGGGEGV-NMMEYMAAQP 248

Query: 168 XXXXXXXXXYRVDPYHVP----PPQMFSDENPNAC 76
                        PY  P     PQ+FSDENPNAC
Sbjct: 249 AYGYGYYPG---GPYGYPIQAHAPQIFSDENPNAC 280



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
 Frame = -3

Query: 861 ETNKNQDKK----GDGVKKEDIKTPTVLKVKMHCDGCAKKVIRSVKRIEGVEGVMADSST 694
           +  K+++KK     D   KE   T  VLK+  HC GC  K+ ++V + +GV G+  D   
Sbjct: 110 DKKKSEEKKKPDNNDKKPKETPVTTAVLKLNFHCQGCIGKIQKTVTKTKGVNGLTMDKEK 169

Query: 693 SKVTVFGKIDPLKLREKVELNTKKKVELISPIPKKDKDAG 574
           + +TV G +D  KL E +    K+ VE++ P  +KDK+ G
Sbjct: 170 NLLTVKGTMDVKKLVEILSEKLKRAVEIVPPKKEKDKENG 209


>ref|XP_002866395.1| hypothetical protein ARALYDRAFT_496228 [Arabidopsis lyrata subsp.
           lyrata] gi|297312230|gb|EFH42654.1| hypothetical protein
           ARALYDRAFT_496228 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score =  166 bits (419), Expect = 8e-39
 Identities = 104/274 (37%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
 Frame = -3

Query: 849 NQDKKGDGVKKEDIKTPTV-LKVKMHCDGCAKKVIRSVKRIEGVEGVMADSSTSKVTVFG 673
           N+ K GD  KK +  + TV LKV MHC+GCA ++++ V+  +GVE V ++S+T K+TV G
Sbjct: 10  NKKKGGDNKKKNETPSITVVLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTG 69

Query: 672 KIDPLKLREKVELNTKKKVELISPIPKK---------------DKDAGETXXXXXXXXXX 538
            +DP+KLREK+E  TKKKV+L+SP PKK               DK   E           
Sbjct: 70  ALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENNKDKNKNDEDKKKSEEKKKPDNNEKK 129

Query: 537 XXXPQVTTATFKTRLHCEGCTQKIHKSISKIKGVEAVTIDKLQDLVTVKGTMDVKDLPSY 358
                VTTA  K   HC+GC  KI K+I+K KGV+ +T+DK ++LVTVKGTMDVK L   
Sbjct: 130 PKETPVTTAVLKLNFHCQGCIGKIQKTITKTKGVDGLTMDKEKNLVTVKGTMDVKKLVES 189

Query: 357 LQKKHKRTVEFFLPKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPEESMANRMDXXX 178
           L +K KR VE   PK                                   +M   M    
Sbjct: 190 LSEKLKRQVEIVPPKKEKENGNETGEKKKGGGGDGGGKEKSGNKGGGEGVNMMEYMAAQP 249

Query: 177 XXXXXXXXXXXXYRVDPYHVPPPQMFSDENPNAC 76
                           P     PQ+FSDENPNAC
Sbjct: 250 AYGYGYYPGGPYGY--PIQAHAPQIFSDENPNAC 281


Top