BLASTX nr result

ID: Coptis21_contig00000229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000229
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135329.1| PREDICTED: ranBP2-type zinc finger protein A...   402   e-109
ref|XP_002514906.1| protein with unknown function [Ricinus commu...   399   e-108
ref|XP_003551204.1| PREDICTED: ranBP2-type zinc finger protein A...   398   e-108
ref|XP_003538545.1| PREDICTED: ranBP2-type zinc finger protein A...   395   e-107
emb|CBI27663.3| unnamed protein product [Vitis vinifera]              393   e-107

>ref|XP_004135329.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Cucumis
            sativus] gi|449494955|ref|XP_004159694.1| PREDICTED:
            ranBP2-type zinc finger protein At1g67325-like [Cucumis
            sativus]
          Length = 285

 Score =  402 bits (1033), Expect = e-109
 Identities = 195/287 (67%), Positives = 215/287 (74%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1372 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1193
            MSQ+D+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1192 AKSPHAPHGYSSSTAYMGSGVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1013
            AK   AP GYS S  YMGSG PSSMY   PPYGSS+FNG+S+PPY++ FSGGS Y Y+YG
Sbjct: 61   AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 1012 NRLSAGSPYGPLHLS-----AXXXXXXXXXXXXXXXXMDRYXXXXXXXXXXXXXARQGVY 848
            +R SAGSPY PLHLS     +                MDRY              R G +
Sbjct: 121  SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGP-RPGFF 179

Query: 847  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 668
            P+E   KK ADT RD+DW CP CGN+NFSFRTVCNMRKCNTPKPGSQ SK +KSSK K P
Sbjct: 180  PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 239

Query: 667  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 527
            EGSWKC KCNNIN+PFRTKCNRQNCGADKP+ES +SP + A  E+DQ
Sbjct: 240  EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSP-SPAQEENDQ 285


>ref|XP_002514906.1| protein with unknown function [Ricinus communis]
            gi|223545957|gb|EEF47460.1| protein with unknown function
            [Ricinus communis]
          Length = 286

 Score =  399 bits (1025), Expect = e-108
 Identities = 189/287 (65%), Positives = 216/287 (75%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1372 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1193
            MSQ+D+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1192 AKSPHAPHGYSSSTAYMGSGVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1013
            AK    P  YSS+  Y+GSG PSSMY+  PPYGSSLFN +S+PPY++ FSG S Y Y+YG
Sbjct: 61   AKPMQPPQNYSSAAPYVGSGPPSSMYMGVPPYGSSLFNASSIPPYDVPFSGASAYHYNYG 120

Query: 1012 NRLSAGSPYGPLHLS-----AXXXXXXXXXXXXXXXXMDRYXXXXXXXXXXXXXARQGVY 848
            +RLSAGSPY PLH+S     +                MDRY              R G +
Sbjct: 121  SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGMYGMPPLMDRYGLAMPMGGPPAMGPRPGFF 180

Query: 847  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 668
            P++   KK AD  RD+DWTCP CGN+NFSFRTVCNMRKCNTPKPGSQ +K+EK+SK KMP
Sbjct: 181  PDDKSLKKGADAARDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSEKTSKQKMP 240

Query: 667  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 527
            EGSWKC KCNNIN+PFRTKCNRQNCGA+KP ES +SP + A+ E+DQ
Sbjct: 241  EGSWKCEKCNNINYPFRTKCNRQNCGAEKPDESKKSP-SPATDENDQ 286


>ref|XP_003551204.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Glycine
            max]
          Length = 285

 Score =  398 bits (1022), Expect = e-108
 Identities = 190/287 (66%), Positives = 215/287 (74%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1372 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1193
            MS++DNRNSSA KRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSRVDNRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1192 AKSPHAPHGYSSSTAYMGSGVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1013
            AK   AP GYSSS  Y+GS  PSS+YL  PPYGSSLFNG+S+PPY++ FSGGS Y Y+YG
Sbjct: 61   AKPLQAPQGYSSSAPYLGSNTPSSIYLGVPPYGSSLFNGSSVPPYDVPFSGGSAYHYNYG 120

Query: 1012 NRLSAGSPYGPLHLSAXXXXXXXXXXXXXXXXM-----DRYXXXXXXXXXXXXXARQGVY 848
            +RLSAGSPY PLHLS                       DRY              R G +
Sbjct: 121  SRLSAGSPYRPLHLSGPTPYTGGPVMGNGGIYGMPQLLDRYGLGVPIGPGTMGA-RPGFF 179

Query: 847  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 668
             ++   KK  D  RD+DWTCP CGNVNFSFRT+CNMRKCNTPKPGSQ SK++K+SK KMP
Sbjct: 180  HDDKSQKKGTDATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKPGSQASKSDKNSKQKMP 239

Query: 667  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 527
            EGSWKC KCNNIN+PFRTKCNRQNCGADKP+ES +SP + A+ ++DQ
Sbjct: 240  EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSP-SPAADQNDQ 285


>ref|XP_003538545.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Glycine
            max]
          Length = 283

 Score =  395 bits (1015), Expect = e-107
 Identities = 191/285 (67%), Positives = 211/285 (74%), Gaps = 5/285 (1%)
 Frame = -1

Query: 1372 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1193
            MS++DNRNSSA KRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSRVDNRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1192 AKSPHAPHGYSSSTAYMGSGVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1013
            AK   AP GYSSS  Y+GS  PSS+YL  PPYGSSLFNG+S+PPY++ FSGGS Y Y+YG
Sbjct: 61   AKPLQAPQGYSSSAPYLGSNTPSSIYLGVPPYGSSLFNGSSVPPYDVPFSGGSAYHYNYG 120

Query: 1012 NRLSAGSPYGPLHLSAXXXXXXXXXXXXXXXXM-----DRYXXXXXXXXXXXXXARQGVY 848
            +RLSAGSPY PLHLS                       DRY              R G +
Sbjct: 121  SRLSAGSPYRPLHLSGPTPYTGGPVIGNGGIYGMPQLLDRYGLGIPIGPGTMGA-RPGFF 179

Query: 847  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 668
             ++   KK  D  RD+DWTCP CGNVNFSFRTVCNMRKCNTPKPGSQ SK++K+SK KMP
Sbjct: 180  HDDKSQKK--DATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNSKQKMP 237

Query: 667  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGED 533
            EGSWKC KCNNIN+PFRTKCNRQNCGADKP+ES ESP + A   D
Sbjct: 238  EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEESPSSAADQND 282


>emb|CBI27663.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  393 bits (1010), Expect = e-107
 Identities = 194/287 (67%), Positives = 217/287 (75%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1372 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1193
            MSQ+DNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1192 AKSPHAPHGYSSSTAYMGSGVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1013
            AK   AP GYSS+  Y+GSG PSSMYL  PPYGSSLFNGA +PPY+  FSGGS Y Y+YG
Sbjct: 61   AKPVQAPQGYSSA-PYVGSGAPSSMYLGVPPYGSSLFNGAPIPPYDGPFSGGSAYHYNYG 119

Query: 1012 NRLSAGSPYGPLHLS-----AXXXXXXXXXXXXXXXXMDRYXXXXXXXXXXXXXARQGVY 848
            +RLSAGSPY PLHLS     +                +DRY              R G +
Sbjct: 120  SRLSAGSPYRPLHLSGPPPYSSGSMMGNGGMYGMPPLVDRY-GLGLPMGHAAMGPRPGFF 178

Query: 847  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 668
            P++   KK  D  RD+DWTCP CGNVNFSFRTVCNMRKCNTPKPGSQ +K+EK+SK KMP
Sbjct: 179  PDDKSQKK--DATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQAAKSEKNSKQKMP 236

Query: 667  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 527
            +GSWKC KC+NIN+PFRTKCNRQNCGADKPSES +SP + +  E+DQ
Sbjct: 237  DGSWKCEKCSNINYPFRTKCNRQNCGADKPSESTKSP-SPSPDENDQ 282


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