BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000218
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana...   105   4e-21
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid...   105   4e-21
ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloro...   103   1e-20
ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu...   103   1e-20
gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK3595...   100   1e-19

>ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana]
           gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
           ribosomal protein L18, chloroplastic; AltName:
           Full=CL18; Flags: Precursor
           gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
           Ribosomal protein L18 from Thermotoga maritima
           gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
           come from this gene [Arabidopsis thaliana]
           gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
           protein L18 [Arabidopsis thaliana]
           gi|110740956|dbj|BAE98573.1| hypothetical protein
           [Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
           ribosomal protein L18 [Arabidopsis thaliana]
          Length = 170

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/55 (90%), Positives = 52/55 (94%)
 Frame = +1

Query: 1   YTSGPTIEIAKKVGEVIAKACLEKGIQKVAFDHGGYPYHGRIEALADAAREHGLQ 165
           YTSGPTIE+AKKVGEVIAK+CLEKGI KVAFD GGYPYHGRIEALA AAREHGLQ
Sbjct: 115 YTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQ 169


>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
           L18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/55 (90%), Positives = 52/55 (94%)
 Frame = +1

Query: 1   YTSGPTIEIAKKVGEVIAKACLEKGIQKVAFDHGGYPYHGRIEALADAAREHGLQ 165
           YTSGPTIE+AKKVGEVIAK+CLEKGI KVAFD GGYPYHGRIEALA AAREHGLQ
Sbjct: 115 YTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQ 169


>ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449498793|ref|XP_004160635.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 170

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/55 (83%), Positives = 52/55 (94%)
 Frame = +1

Query: 1   YTSGPTIEIAKKVGEVIAKACLEKGIQKVAFDHGGYPYHGRIEALADAAREHGLQ 165
           Y++GPTIE+AKK+GE IAK+CLEKGI KVAFD GGYPYHGR+EALADAAREHGLQ
Sbjct: 115 YSAGPTIEVAKKIGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQ 169


>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
           communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
           protein L18, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/55 (87%), Positives = 53/55 (96%)
 Frame = +1

Query: 1   YTSGPTIEIAKKVGEVIAKACLEKGIQKVAFDHGGYPYHGRIEALADAAREHGLQ 165
           Y+SGPT+E+AKKVGEVIAK+CLEKGI KVAFD GGYPYHGRIEALADAARE+GLQ
Sbjct: 109 YSSGPTLEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALADAARENGLQ 163


>gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK35950.1| unknown
           [Lotus japonicus]
          Length = 162

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/54 (83%), Positives = 52/54 (96%)
 Frame = +1

Query: 1   YTSGPTIEIAKKVGEVIAKACLEKGIQKVAFDHGGYPYHGRIEALADAAREHGL 162
           YT+GPTIE+AKKVGE+IAK+CLEKGI KVAFD GGYPYHGR++ALADAARE+GL
Sbjct: 107 YTAGPTIEVAKKVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAARENGL 160