BLASTX nr result

ID: Coptis21_contig00000201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000201
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20803.3| unnamed protein product [Vitis vinifera]              185   1e-44
ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255...   185   1e-44
emb|CAA16530.1| hypothetical protein [Arabidopsis thaliana] gi|7...   134   2e-29
ref|NP_194855.2| sequence-specific DNA binding transcription fac...   132   7e-29
ref|XP_002527997.1| transcription factor, putative [Ricinus comm...   131   2e-28

>emb|CBI20803.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  185 bits (469), Expect = 1e-44
 Identities = 105/250 (42%), Positives = 164/250 (65%), Gaps = 14/250 (5%)
 Frame = -3

Query: 718 ENGECSEIK-KSFRRTRSKAAPNWTLGETFVLVNEVASVESDSTKTISSSYQKWKHISDN 542
           E GE  + +  S RRTRS+ AP+WT+ ++ +LVNE+A+VE +    +S+ YQKWK I++N
Sbjct: 2   EQGEGHQSRVSSSRRTRSQLAPDWTINDSLILVNEIAAVEGECLNALST-YQKWKIIAEN 60

Query: 541 CNALGVSRSLNQCRRKWELLFDQYSRIKEWEMQSRVVSYWSLDCDSQLELQLPLLFDKDL 362
           C AL VSR+ NQCRRKW+ L  +Y++IK+WE +SR VS+W+L+ + + EL LP+ F+++L
Sbjct: 61  CTALDVSRTFNQCRRKWDSLLFEYNKIKKWESRSRNVSFWTLESERRRELGLPVDFEREL 120

Query: 361 FGSIEEAVQAQE-ESDTD--SDPNF------TLRKSGLKKKRRWQIPRESKN-DEKDDEM 212
           F +I++ V +QE  SDTD  +DP         + + G KK++R ++P+++ + +EK+  M
Sbjct: 121 FKAIDDLVSSQEVRSDTDPGTDPEAEDDRLEVIAEYGPKKQKRREMPQKTTSLEEKEQMM 180

Query: 211 AVKLREQARLVHAILRG---DPKCSRYSDTKGPGESQLEFKRWQGNELIKVLGSLNGIID 41
            +KLRE A L+ AI++G   D        +K     Q +FKR QG++LI  L  +   +D
Sbjct: 181 VMKLRENADLIDAIVKGNLVDSVDFGLGGSKNRETLQADFKRRQGDKLIACLRDIADTLD 240

Query: 40  QLSDLVQDGG 11
           QL D+VQ  G
Sbjct: 241 QLRDIVQKCG 250


>ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255883 isoform 1 [Vitis
           vinifera] gi|359476329|ref|XP_003631820.1| PREDICTED:
           uncharacterized protein LOC100255883 isoform 2 [Vitis
           vinifera]
          Length = 274

 Score =  185 bits (469), Expect = 1e-44
 Identities = 105/250 (42%), Positives = 164/250 (65%), Gaps = 14/250 (5%)
 Frame = -3

Query: 718 ENGECSEIK-KSFRRTRSKAAPNWTLGETFVLVNEVASVESDSTKTISSSYQKWKHISDN 542
           E GE  + +  S RRTRS+ AP+WT+ ++ +LVNE+A+VE +    +S+ YQKWK I++N
Sbjct: 26  EQGEGHQSRVSSSRRTRSQLAPDWTINDSLILVNEIAAVEGECLNALST-YQKWKIIAEN 84

Query: 541 CNALGVSRSLNQCRRKWELLFDQYSRIKEWEMQSRVVSYWSLDCDSQLELQLPLLFDKDL 362
           C AL VSR+ NQCRRKW+ L  +Y++IK+WE +SR VS+W+L+ + + EL LP+ F+++L
Sbjct: 85  CTALDVSRTFNQCRRKWDSLLFEYNKIKKWESRSRNVSFWTLESERRRELGLPVDFEREL 144

Query: 361 FGSIEEAVQAQE-ESDTD--SDPNF------TLRKSGLKKKRRWQIPRESKN-DEKDDEM 212
           F +I++ V +QE  SDTD  +DP         + + G KK++R ++P+++ + +EK+  M
Sbjct: 145 FKAIDDLVSSQEVRSDTDPGTDPEAEDDRLEVIAEYGPKKQKRREMPQKTTSLEEKEQMM 204

Query: 211 AVKLREQARLVHAILRG---DPKCSRYSDTKGPGESQLEFKRWQGNELIKVLGSLNGIID 41
            +KLRE A L+ AI++G   D        +K     Q +FKR QG++LI  L  +   +D
Sbjct: 205 VMKLRENADLIDAIVKGNLVDSVDFGLGGSKNRETLQADFKRRQGDKLIACLRDIADTLD 264

Query: 40  QLSDLVQDGG 11
           QL D+VQ  G
Sbjct: 265 QLRDIVQKCG 274


>emb|CAA16530.1| hypothetical protein [Arabidopsis thaliana]
           gi|7270029|emb|CAB79845.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 291

 Score =  134 bits (337), Expect = 2e-29
 Identities = 74/176 (42%), Positives = 109/176 (61%), Gaps = 12/176 (6%)
 Frame = -3

Query: 682 RRTRSKAAPNWTLGETFVLVNEVASVESDSTKTISSSYQKWKHISDNCNALGVSRSLNQC 503
           RRTRS+ AP W + +  VLVNE+A+VE+D +  +SS +QKW  I++NCNAL VSR+LNQC
Sbjct: 9   RRTRSQVAPEWAVKDCLVLVNEIAAVEADCSNALSS-FQKWTMITENCNALDVSRNLNQC 67

Query: 502 RRKWELLFDQYSRIKEWEMQSRVV--SYWSLDCDSQLELQLPLLFDKDLFGSIEEAVQAQ 329
           RRKW+ L   Y++IK+WE Q R    SYWSL  D +  L LP   D +LF +I   V  Q
Sbjct: 68  RRKWDSLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDIDIELFEAINAVVMIQ 127

Query: 328 EE---SDTDSDP------NFTLRKSGLKKKRRWQIPRESKNDE-KDDEMAVKLREQ 191
           +E   +++DSDP      + +      + ++R  + +E+K +E +   + V  RE+
Sbjct: 128 DEKAGTESDSDPEAQDVVDLSAELGSKRSRQRTMVMKETKKEEPRTSRVQVNTREK 183


>ref|NP_194855.2| sequence-specific DNA binding transcription factor [Arabidopsis
           thaliana] gi|26452367|dbj|BAC43269.1| unknown protein
           [Arabidopsis thaliana] gi|28950855|gb|AAO63351.1|
           At4g31270 [Arabidopsis thaliana]
           gi|332660484|gb|AEE85884.1| sequence-specific DNA
           binding transcription factor [Arabidopsis thaliana]
          Length = 294

 Score =  132 bits (333), Expect = 7e-29
 Identities = 78/179 (43%), Positives = 110/179 (61%), Gaps = 15/179 (8%)
 Frame = -3

Query: 682 RRTRSKAAPNWTLGETFVLVNEVASVESDSTKTISSSYQKWKHISDNCNALGVSRSLNQC 503
           RRTRS+ AP W + +  VLVNE+A+VE+D +  +SS +QKW  I++NCNAL VSR+LNQC
Sbjct: 9   RRTRSQVAPEWAVKDCLVLVNEIAAVEADCSNALSS-FQKWTMITENCNALDVSRNLNQC 67

Query: 502 RRKWELLFDQYSRIKEWEMQSRVV--SYWSLDCDSQLELQLPLLFDKDLFGSIEEAVQAQ 329
           RRKW+ L   Y++IK+WE Q R    SYWSL  D +  L LP   D +LF +I   V  Q
Sbjct: 68  RRKWDSLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDIDIELFEAINAVVMIQ 127

Query: 328 EE---SDTDSDP--------NFTLRKSGLKKKR-RWQIPRESKNDE-KDDEMAVKLREQ 191
           +E   +++DSDP        +  L   G K+ R R  + +E+K +E +   + V  RE+
Sbjct: 128 DEKAGTESDSDPEAQDVVDLSAELAFVGSKRSRQRTMVMKETKKEEPRTSRVQVNTREK 186


>ref|XP_002527997.1| transcription factor, putative [Ricinus communis]
           gi|223532623|gb|EEF34409.1| transcription factor,
           putative [Ricinus communis]
          Length = 419

 Score =  131 bits (330), Expect = 2e-28
 Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 15/199 (7%)
 Frame = -3

Query: 724 PKENGECSEIKKSFR-----RTRSKAAPNWTLGETFVLVNEVASVESDSTKTISSSYQKW 560
           PK++ E S    S++     RTRS+ AP+WT  E+ +LVNE+A+VE D  K +S+ +QKW
Sbjct: 19  PKKSAEESSNANSYKAPSPPRTRSQVAPDWTTKESLILVNEIAAVEGDCLKALST-HQKW 77

Query: 559 KHISDNCNALGVSRSLNQCRRKWELLFDQYSRIKEWEMQ-SRVVSYWSLDCDSQLELQLP 383
             I  NC+ L VSR+LNQCR KW  L   Y+RIK+W+ + S   SYW LD  ++    LP
Sbjct: 78  NIIVQNCSVLDVSRTLNQCRSKWSSLLADYNRIKQWDSKSSSESSYWLLDPPTRDRCGLP 137

Query: 382 LLFDKDLFGSIEEAVQAQE---ESDTDSDPNF------TLRKSGLKKKRRWQIPRESKND 230
             FD +LF +I+  V+AQ+   ++D D+DP         + K G K+ RR  +  + + +
Sbjct: 138 HNFDYELFRAIDHYVRAQKDHPDTDPDTDPEADADLLDVIAKLGSKRHRRRSMSLKIQPE 197

Query: 229 EKDDEMAVKLREQARLVHA 173
           E       K  EQA+++HA
Sbjct: 198 ETSQNCCTK--EQAQILHA 214


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