BLASTX nr result

ID: Coptis21_contig00000196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000196
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation...   307   2e-81
gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Cam...   306   5e-81
gb|AAQ08191.1| eukaryotic translation initiation factor 5A isofo...   305   9e-81
sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation init...   305   2e-80
gb|ACP31199.1| eukaryotic initiation factor 5A2 [Musa hybrid cul...   304   2e-80

>ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation factor 5A [Vitis
           vinifera] gi|147807413|emb|CAN70753.1| hypothetical
           protein VITISV_014697 [Vitis vinifera]
           gi|296090571|emb|CBI40934.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  307 bits (787), Expect = 2e-81
 Identities = 150/159 (94%), Positives = 154/159 (96%)
 Frame = -3

Query: 933 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 754
           MSDEEH F+SKADAGASKTYPQQAG IRKNGYIVIKAR CKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTYPQQAGAIRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHF 60

Query: 753 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTE 574
           V IDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENG+TKDDLRLPT+
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 573 EALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 457
           + LLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 159


>gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Camellia sinensis]
          Length = 160

 Score =  306 bits (784), Expect = 5e-81
 Identities = 149/159 (93%), Positives = 154/159 (96%)
 Frame = -3

Query: 933 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 754
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK R CKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 753 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTE 574
           VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENG+TKDDLRLPT+
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 573 EALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 457
           + LL+QIKDGF +GKDLVVTVMSAMGEEQICALKDIGPK
Sbjct: 121 DVLLTQIKDGFGEGKDLVVTVMSAMGEEQICALKDIGPK 159


>gb|AAQ08191.1| eukaryotic translation initiation factor 5A isoform I [Hevea
           brasiliensis] gi|33325119|gb|AAQ08192.1| eukaryotic
           translation initiation factor 5A isoform II [Hevea
           brasiliensis]
          Length = 160

 Score =  305 bits (782), Expect = 9e-81
 Identities = 150/159 (94%), Positives = 153/159 (96%)
 Frame = -3

Query: 933 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 754
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK R CKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 753 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTE 574
           V IDIFN KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENG+TKDDLRLPT+
Sbjct: 61  VGIDIFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 573 EALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 457
           E LLSQIKDGFA+GKDLVVTVMSAMGEEQICALKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159


>sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation initiation factor 5A;
           Short=eIF-5A gi|6689385|emb|CAB65463.1| translation
           initiation factor 5A precursor protein (eIF-5A) [Senecio
           vernalis]
          Length = 159

 Score =  305 bits (780), Expect = 2e-80
 Identities = 148/159 (93%), Positives = 156/159 (98%)
 Frame = -3

Query: 933 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 754
           MSDEEHQFESKADAGASKTYPQQAGTIRK G+IVIK RACKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHF 60

Query: 753 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTE 574
           VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENG+TKDDL+LPT+
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 573 EALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 457
           +ALL+QIKDGF +GKDLVV+VMSAMGEEQICALKDIGPK
Sbjct: 121 DALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159


>gb|ACP31199.1| eukaryotic initiation factor 5A2 [Musa hybrid cultivar]
          Length = 159

 Score =  304 bits (779), Expect = 2e-80
 Identities = 148/159 (93%), Positives = 152/159 (95%)
 Frame = -3

Query: 933 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 754
           MSDEEH FESKADAGASKTYPQQAG IRKNGYIVIK R CKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 753 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTE 574
           VAID+FN KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLL ENG+TKDDLRLPT+
Sbjct: 61  VAIDVFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLMENGNTKDDLRLPTD 120

Query: 573 EALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 457
           E LL+QIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK
Sbjct: 121 ETLLAQIKDGFADGKDLVVTVMSAMGEEQICALKDIGPK 159


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