BLASTX nr result

ID: Coptis21_contig00000195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000195
         (1878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31025.3| unnamed protein product [Vitis vinifera]              324   4e-86
ref|XP_002263657.1| PREDICTED: GDP-L-galactose phosphorylase 1-l...   323   7e-86
ref|NP_001067256.1| Os12g0612100 [Oryza sativa Japonica Group] g...   240   1e-60
ref|XP_003577487.1| PREDICTED: GDP-L-galactose phosphorylase 1-l...   233   1e-58
dbj|BAJ89803.1| predicted protein [Hordeum vulgare subsp. vulgare]    233   1e-58

>emb|CBI31025.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  324 bits (831), Expect = 4e-86
 Identities = 182/383 (47%), Positives = 250/383 (65%), Gaps = 7/383 (1%)
 Frame = -2

Query: 1259 VTVKQCEDDYCLMKHSAASELSKCPSLDLQGARVPIYMFGSQSSLDGCAYRKIFNTL--E 1086
            + VKQ +DD  L+K  A  + +KCP       ++P+Y F SQS  D   + + F+ +  +
Sbjct: 1    MVVKQLKDDNFLLK-CATPDQAKCPQFSFGSIQIPLYCFASQSLDDSGPFGR-FSCIPDD 58

Query: 1085 KQSLLDSLVLAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNSLPVLKEK 906
            + S L+SL+LAQWEDR WKG++ YDVTT E+K+  G +KF+ QLNEE + ++ L    E 
Sbjct: 59   EPSTLESLLLAQWEDRMWKGIYRYDVTTSEIKIIGGRRKFLAQLNEEWN-MDHLSDPDEN 117

Query: 905  GARHQLYPIIYNCKRPHMEEFLFAVTTGEKALPELIQSASVPQDVNLSIIINANPVDYGH 726
                +    I+N  + H EE LF V +GEKA+PELI +A VP + ++ ++ N  PV+YGH
Sbjct: 118  EVCWRGDSFIFNWVKHH-EELLFCVASGEKAIPELIPTAPVP-NASILVLSNVTPVEYGH 175

Query: 725  VFLLPSGYCGLSGILDSRLLEMVTRFALEINNCSFRIFYDFSASNSNQQCVQACYLAIPL 546
            VFL+P G+  +S  +D+R LEMVTR A+E+NN SFR+FYD S  +++    QACY + PL
Sbjct: 176  VFLVPHGFTSISQFMDARSLEMVTRVAMEVNNRSFRVFYDCSMPSASLY-FQACYFSNPL 234

Query: 545  PVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGHGNLKLLVEVVSEICSCLQKLNNP 366
            PVE MPV TL  N G  G  I  + DYPIKAL F+   N+K+ VEV++EICSCLQ  N P
Sbjct: 235  PVEVMPVVTLWDN-GLGGTRICSLIDYPIKALLFESKSNVKVSVEVLAEICSCLQGKNIP 293

Query: 365  YSLLITDFGANMMLFPQNTCCS-----LSALECGGHFVFKTKHEFDQASEEPLLKRLADA 201
            YS LI+D G  + LFPQ    S     LS+ EC GHFVFK++++FDQ +EE +L+R+  A
Sbjct: 294  YSFLISDCGKRIFLFPQQMRASANSHALSSWECSGHFVFKSRNDFDQVTEEAMLERMGTA 353

Query: 200  SLGNEDFLSVKQLCCRIADQLSS 132
            SL    F  VKQLCC IA +L+S
Sbjct: 354  SLDEPGFQVVKQLCCSIASKLAS 376


>ref|XP_002263657.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Vitis vinifera]
          Length = 375

 Score =  323 bits (829), Expect = 7e-86
 Identities = 181/382 (47%), Positives = 250/382 (65%), Gaps = 6/382 (1%)
 Frame = -2

Query: 1259 VTVKQCEDDYCLMKHSAASELSKCPSLDLQGARVPIYMFGSQSSLDGCAYRKIFNTL--E 1086
            + VKQ +DD  L+K  A  + +KCP       ++P+Y F SQS  D   + + F+ +  +
Sbjct: 1    MVVKQLKDDNFLLK-CATPDQAKCPQFSFGSIQIPLYCFASQSLDDSGPFGR-FSCIPDD 58

Query: 1085 KQSLLDSLVLAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNSLPVLKEK 906
            + S L+SL+LAQWEDR WKG++ YDVTT E+K+  G +KF+ QLNEE + ++ L    E 
Sbjct: 59   EPSTLESLLLAQWEDRMWKGIYRYDVTTSEIKIIGGRRKFLAQLNEEWN-MDHLSDPDEN 117

Query: 905  GARHQLYPIIYNCKRPHMEEFLFAVTTGEKALPELIQSASVPQDVNLSIIINANPVDYGH 726
                +    I+N  + H EE LF V +GEKA+PELI +A VP + ++ ++ N  PV+YGH
Sbjct: 118  EVCWRGDSFIFNWVKHH-EELLFCVASGEKAIPELIPTAPVP-NASILVLSNVTPVEYGH 175

Query: 725  VFLLPSGYCGLSGILDSRLLEMVTRFALEINNCSFRIFYDFSASNSNQQCVQACYLAIPL 546
            VFL+P G+  +S  +D+R LEMVTR A+E+NN SFR+FYD S  +++    QACY + PL
Sbjct: 176  VFLVPHGFTSISQFMDARSLEMVTRVAMEVNNRSFRVFYDCSMPSASLY-FQACYFSNPL 234

Query: 545  PVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGHGNLKLLVEVVSEICSCLQKLNNP 366
            PVE MPV TL  N G  G  I  + DYPIKAL F+   N+K+ VEV++EICSCLQ  N P
Sbjct: 235  PVEVMPVVTLWDN-GLGGTRICSLIDYPIKALLFESKSNVKVSVEVLAEICSCLQGKNIP 293

Query: 365  YSLLITDFGANMMLFPQNTCC----SLSALECGGHFVFKTKHEFDQASEEPLLKRLADAS 198
            YS LI+D G  + LFPQ        +LS+ EC GHFVFK++++FDQ +EE +L+R+  AS
Sbjct: 294  YSFLISDCGKRIFLFPQMRASANSHALSSWECSGHFVFKSRNDFDQVTEEAMLERMGTAS 353

Query: 197  LGNEDFLSVKQLCCRIADQLSS 132
            L    F  VKQLCC IA +L+S
Sbjct: 354  LDEPGFQVVKQLCCSIASKLAS 375


>ref|NP_001067256.1| Os12g0612100 [Oryza sativa Japonica Group] gi|77556583|gb|ABA99379.1|
            VTC2, putative, expressed [Oryza sativa Japonica Group]
            gi|113649763|dbj|BAF30275.1| Os12g0612100 [Oryza sativa
            Japonica Group] gi|215678716|dbj|BAG95153.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222617464|gb|EEE53596.1| hypothetical protein
            OsJ_36845 [Oryza sativa Japonica Group]
          Length = 368

 Score =  240 bits (612), Expect = 1e-60
 Identities = 143/384 (37%), Positives = 209/384 (54%), Gaps = 9/384 (2%)
 Frame = -2

Query: 1262 MVTVKQCEDDYCLMKHSAASELSKCPSLDLQGARVPIYMFGSQSSLDGCAYRKIFNTLEK 1083
            MV+  + + +Y L          K P    +G +  +Y  G++   +G      +     
Sbjct: 1    MVSTTEFKGEYSLPS-------KKSPLDQFEGVKTHLYRLGAEHE-NGTLKSFAYTDQGS 52

Query: 1082 QSLLDSLVLAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNSLPVLKEKG 903
             SLLD+++L+QWED AWKG F YDVT C +KV  G   FV QLN++    NS  VLKE  
Sbjct: 53   PSLLDTIILSQWEDYAWKGHFGYDVTACNLKVVEGGWSFVVQLNDK---WNSC-VLKE-- 106

Query: 902  ARHQLYPIIYNCKRPH----MEEFLFAVTTGEKALPELIQSASVPQDVNLSIIINANPVD 735
              H  +     C +P+     +E L  +  G+K +PE++ S   P+D  L +I NA PV+
Sbjct: 107  --HDKFLEPVGCLKPNCMNSYDELLLCIAQGDKDIPEVVPSTKPPKD-GLLLIANAYPVE 163

Query: 734  YGHVFLLPSGYCGLSGILDSRLLEMVTRFALEINNCSFRIFYDFSASN-SNQQCVQACYL 558
            YGH+FL+PS    LS   D R+  ++ R A E+N+ +FR+F+D   S   +    QACY 
Sbjct: 164  YGHIFLVPSATNQLSFFWDKRMFSLIARIASEVNSAAFRVFFDSCTSTMPDHMFFQACYF 223

Query: 557  AIPLPVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGHGNLKLLVEVVSEICSCLQK 378
            A PLPVES     +        +H+ E+ DYP+KAL   G  ++  L   VSE+   L  
Sbjct: 224  ANPLPVESASTVAIYHGKATSAVHLYEIIDYPMKALVLTGK-DVNTLANFVSEVSLTLHD 282

Query: 377  LNNPYSLLITDFGANMMLFPQ----NTCCSLSALECGGHFVFKTKHEFDQASEEPLLKRL 210
             N  YSLLI++ G  + LFPQ     T C LSA EC G+F+++ K++FD+ASE  +  R+
Sbjct: 283  NNTAYSLLISNNGTKVFLFPQVKNLATGCCLSAWECSGYFIYRAKYDFDRASENEISNRM 342

Query: 209  ADASLGNEDFLSVKQLCCRIADQL 138
            A  +L +  F ++K LCC +AD L
Sbjct: 343  ASVTLQDGAFENLKNLCCAVADDL 366


>ref|XP_003577487.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Brachypodium
            distachyon]
          Length = 369

 Score =  233 bits (594), Expect = 1e-58
 Identities = 145/380 (38%), Positives = 214/380 (56%), Gaps = 7/380 (1%)
 Frame = -2

Query: 1262 MVTVKQCEDDYCLMKHSAASELSKCPSLDL-QGARVPIYMFGSQSSLDGCAYRKIFNTLE 1086
            MV+  + E +Y        S   K P LD  +G ++ +Y FG +   +    R       
Sbjct: 1    MVSATKLEGEY--------SFHGKNPPLDQSEGVKLHLYRFGIEHHGNDDLKRITCIDQA 52

Query: 1085 KQSLLDSLVLAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNSLPVLKEK 906
              +LLD+++L+QWE+ A +G   YDVTTC++KV  G + FV Q+N++        +LKE 
Sbjct: 53   SPTLLDTIILSQWENFAREGHLGYDVTTCKLKVIEGERNFVVQMNDKWDSF----LLKEY 108

Query: 905  GA-RHQLYPIIYNCKRPHMEEFLFAVTTGEKALPELIQSASVPQDVNLSIIINANPVDYG 729
            G  R  L  +  +C   H EE L  +  GEK +PE++ SA+ P +  + +I NA PV+YG
Sbjct: 109  GKFRQPLGCLKPDCTESH-EELLLCIAQGEKDVPEVVPSAT-PVNDGVLLIANAYPVEYG 166

Query: 728  HVFLLPSGYCGLSGILDSRLLEMVTRFALEINNCSFRIFYDFSAS-NSNQQCVQACYLAI 552
            H+FL+PS    L+   D R+  ++ R A E+NN +FR+F+D   S   ++   +ACY A 
Sbjct: 167  HIFLVPSATNQLTSFWDRRMFGLIMRSASEVNNAAFRVFFDDGTSIVPDRMFFEACYFAN 226

Query: 551  PLPVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGHGNLKLLVEVVSEICSCLQKLN 372
            PLPVES     +       G+ + E+ DYP+KAL F  + N+  LV VVSE+ S L +  
Sbjct: 227  PLPVESASTVAIYDGKARSGIRVYEIVDYPLKALVFTSN-NVNALVNVVSEVSSTLHENK 285

Query: 371  NPYSLLITDFGANMMLFPQN----TCCSLSALECGGHFVFKTKHEFDQASEEPLLKRLAD 204
              YSLLI++ G N+ LFPQ     T C L A EC G+FV+ TK +FD+ASE  +  ++A 
Sbjct: 286  TAYSLLISNHGRNVCLFPQAKSLVTGCCLPAWECCGYFVYGTKADFDKASETEISDKMAS 345

Query: 203  ASLGNEDFLSVKQLCCRIAD 144
             S  ++ F  +K LCC IAD
Sbjct: 346  FSFQDDAFEDLKNLCCAIAD 365


>dbj|BAJ89803.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 369

 Score =  233 bits (594), Expect = 1e-58
 Identities = 131/323 (40%), Positives = 192/323 (59%), Gaps = 9/323 (2%)
 Frame = -2

Query: 1079 SLLDSLVLAQWEDRAWKGLFNYDVTTCEMKVTNGLKKFVTQLNEERSVLNSLPVLKEKGA 900
            SLLD+++L+QWE+ A KG   YDVTTCE+KV  G + FV Q+N++    NS  + K    
Sbjct: 55   SLLDTIILSQWENFAQKGQLGYDVTTCELKVIEGQRDFVIQMNDK---WNSFSLKK---- 107

Query: 899  RHQLYPIIYNCKRPHM----EEFLFAVTTGEKALPELIQSASVPQDVNLSIIINANPVDY 732
             +  + + + C +P+     EE L  +  GE + PE++ S + P +  + +I NA PV+Y
Sbjct: 108  -YDKFGLPFGCLKPNSGRSYEELLLCIAEGENSEPEVVPSTTPPNN-GVLLIANAYPVEY 165

Query: 731  GHVFLLPSGYCGLSGILDSRLLEMVTRFALEINNCSFRIFYDFSASN-SNQQCVQACYLA 555
            GH+FL+P+    LS   D R+  ++T+ A E+N+ +FR+F+D   S        QACY A
Sbjct: 166  GHIFLVPNATNQLSSFWDKRMFGLITKIASEVNSAAFRVFFDDGTSIVPKHMFFQACYFA 225

Query: 554  IPLPVESMPVATLSGNWGERGLHISEVTDYPIKALSFKGHGNLKLLVEVVSEICSCLQKL 375
             PLPVES     L       G+ +SE+ DYP+KA+ F  + N+  L++VVS  C  L + 
Sbjct: 226  NPLPVESASTVALYDGTTRSGICVSEIVDYPLKAIVFTSN-NVNALIDVVSAACLALHEN 284

Query: 374  NNPYSLLITDFGANMMLFPQN----TCCSLSALECGGHFVFKTKHEFDQASEEPLLKRLA 207
            N  +SL+I++ G N  LFPQ     T C LSA EC G+FV+ TK +F+QASE  +  R+A
Sbjct: 285  NTAHSLMISNNGRNAFLFPQVKNLVTGCYLSAWECCGYFVYHTKVDFEQASETGISNRMA 344

Query: 206  DASLGNEDFLSVKQLCCRIADQL 138
              S  + DF  +K+LCC IAD L
Sbjct: 345  SFSFQDGDFEDLKKLCCAIADDL 367


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