BLASTX nr result

ID: Coptis21_contig00000188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000188
         (2058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE57355.1| hypothetical protein OsJ_07492 [Oryza sativa Japo...   256   e-117
emb|CAN76946.1| hypothetical protein VITISV_017165 [Vitis vinifera]   257   e-108
emb|CAD41510.3| OSJNBa0029H02.4 [Oryza sativa Japonica Group] gi...   256   e-107
ref|NP_001053213.1| Os04g0498600 [Oryza sativa Japonica Group] g...   256   e-107
gb|EAY94718.1| hypothetical protein OsI_16495 [Oryza sativa Indi...   255   e-106

>gb|EEE57355.1| hypothetical protein OsJ_07492 [Oryza sativa Japonica Group]
          Length = 466

 Score =  256 bits (654), Expect(2) = e-117
 Identities = 133/232 (57%), Positives = 159/232 (68%), Gaps = 6/232 (2%)
 Frame = +2

Query: 1064 GDLASGGVAYVIGDPAVPNRNWHVYSASQKQSENNASKAVVTLEMCMTGLDKEKASVFFK 1243
            G L SGG AYVIGDPA P + WHVY A+Q     +  + VVTLEMCMTGLDK+KASVFFK
Sbjct: 221  GGLKSGGNAYVIGDPAKPGQKWHVYYATQ-----HPEQPVVTLEMCMTGLDKKKASVFFK 275

Query: 1244 KSED---YTAKEMTKISGISEILPSFEICDFDFDPCGYSMNAIDGQAFSTIHVTPEDGFS 1414
             S D     AKEMTK+SGIS+I+P  E+CDFDF+PCGYSMNAI G AFSTIHVTPEDGFS
Sbjct: 276  TSADGHTTYAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAIHGPAFSTIHVTPEDGFS 335

Query: 1415 YASYEAMGFDTETVGFEALIKRVLRCFKPSEFSVAITCDG---RVDSWGENARVMGYACE 1585
            YASYE MGF+  ++ +  L+KRVLRCF P EFSVA+T  G      +W +   V  Y+C 
Sbjct: 336  YASYEVMGFNPASLAYGDLVKRVLRCFGPLEFSVAVTIFGGRNHAGTWAKGLDVGAYSCS 395

Query: 1586 EQVKQELPGGGCIVYRCFSSVGNELAYADKEYGTSSPKSTLHCWDDMEEEAA 1741
              V+QELP GG ++Y+ F+        A  E  T SP+S LHC+ D   E A
Sbjct: 396  NMVEQELPSGGLLIYQSFT--------ATAEIATGSPRSVLHCFADENTEKA 439



 Score =  195 bits (495), Expect(2) = e-117
 Identities = 116/224 (51%), Positives = 136/224 (60%)
 Frame = +1

Query: 274 LQYEAPLGYSIEDVRPNGGIEKFRSAAYSNCVRKPS*YVFSKCHFQ*SRISHCFQVVSLI 453
           L YEAPLGYSIED+RP GGI+KFRSAAYSN +  PS                        
Sbjct: 17  LMYEAPLGYSIEDLRPAGGIKKFRSAAYSNLL--PS------------------------ 50

Query: 454 YQKNSLDSCSSIISQPHFFINTPIFNLLFETMTMLTDSMALTCNTNSNNPTPQSAIGFEG 633
             +    SC         F+++      FETM +L+ +          +  P SAIGFEG
Sbjct: 51  -DREGHQSC---------FLSSSSLASSFETMAVLSVA----------DSPPVSAIGFEG 90

Query: 634 FEKRLEINFSEAPIFVDPQGLGLRALTRPQIDSILDAARCTIVSQLSNDEFDSYVLSESS 813
           +EKRLEI FSEAP+F DP G GLRAL+R QIDS+LD ARCTIVS+LSN+ FDSYVLSESS
Sbjct: 91  YEKRLEITFSEAPVFADPNGRGLRALSRAQIDSVLDLARCTIVSELSNEVFDSYVLSESS 150

Query: 814 LFIYSLKIVIKTCGTTKXXXXXXXXXXXXSSLSLPVESVKYSRG 945
           LF+Y  KIVIKTCGTTK              LSLP+E+VKYSRG
Sbjct: 151 LFVYPYKIVIKTCGTTKLLLAIPRILELAEELSLPLEAVKYSRG 194


>emb|CAN76946.1| hypothetical protein VITISV_017165 [Vitis vinifera]
          Length = 476

 Score =  257 bits (657), Expect(2) = e-108
 Identities = 133/236 (56%), Positives = 169/236 (71%), Gaps = 8/236 (3%)
 Frame = +2

Query: 1064 GDLASGGVAYVIGDPAVPNRNWHVYSASQKQSENNASK---AVVTLEMCMTGLDKEKASV 1234
            GDL+    AYVIGDPA+PNRNWH+YSAS++   +   +   AV+T+EMCMTGLD++KASV
Sbjct: 153  GDLSPK--AYVIGDPAIPNRNWHIYSASKEVRRSPLVREEVAVITVEMCMTGLDRDKASV 210

Query: 1235 FFKKS-EDYTAKEMTKISGISEILPSFEICDFDFDPCGYSMNAIDGQAFSTIHVTPEDGF 1411
            FFKKS E+ +AKEMTK+SGIS+++P+  ICDF+FDPCGYSMN ++G A ST+HVTPE+GF
Sbjct: 211  FFKKSGEEDSAKEMTKLSGISDVMPTHVICDFEFDPCGYSMNGVEGGALSTVHVTPEEGF 270

Query: 1412 SYASYEAMGFDTETVGFEALIKRVLRCFKPSEFSVAITCD-GRVDSWGEN--ARVMGYAC 1582
            SYASYEAMGF   +VG + L+KRVL CF PS+FSVA+TC  G  + W       V GYAC
Sbjct: 271  SYASYEAMGFXPGSVGMKTLMKRVLACFGPSQFSVAVTCPAGDDEXWAMEGCGEVEGYAC 330

Query: 1583 EEQVKQELPGG-GCIVYRCFSSVGNELAYADKEYGTSSPKSTLHCWDDMEEEAAVG 1747
            +  VKQEL  G GC+VY  + +        +K    +SPKS L CW D+E E   G
Sbjct: 331  QNVVKQELSSGEGCVVYVTYEA-------EEKRCAVNSPKSVLQCWKDVEVEEGEG 379



 Score =  162 bits (411), Expect(2) = e-108
 Identities = 83/126 (65%), Positives = 94/126 (74%)
 Frame = +1

Query: 568 MALTCNTNSNNPTPQSAIGFEGFEKRLEINFSEAPIFVDPQGLGLRALTRPQIDSILDAA 747
           MA+   T + +P P S IGFEGFEKRL++ FSEAPIF+DPQGLGLRALTR Q+DSILDAA
Sbjct: 1   MAVLYGTTNGDPPPPSPIGFEGFEKRLQJTFSEAPIFIDPQGLGLRALTRSQLDSILDAA 60

Query: 748 RCTIVSQLSNDEFDSYVLSESSLFIYSLKIVIKTCGTTKXXXXXXXXXXXXSSLSLPVES 927
            CTIV+ LSN E DSYVLSESSLF+Y  KI++KTCGTTK             SL L V S
Sbjct: 61  CCTIVNHLSNSELDSYVLSESSLFVYPNKIILKTCGTTKLLLAIPPILRLAESLQLTVVS 120

Query: 928 VKYSRG 945
           VKYSRG
Sbjct: 121 VKYSRG 126


>emb|CAD41510.3| OSJNBa0029H02.4 [Oryza sativa Japonica Group]
            gi|125572736|gb|EAZ14251.1| hypothetical protein
            OsJ_04176 [Oryza sativa Japonica Group]
          Length = 450

 Score =  256 bits (654), Expect(2) = e-107
 Identities = 131/225 (58%), Positives = 154/225 (68%), Gaps = 6/225 (2%)
 Frame = +2

Query: 1064 GDLASGGVAYVIGDPAVPNRNWHVYSASQKQSENNASKAVVTLEMCMTGLDKEKASVFFK 1243
            G L SGG AYVIGDPA P + WH+Y A+Q     +  + +VTLEMCMTGLDKEKASVFFK
Sbjct: 202  GHLKSGGNAYVIGDPAKPGQKWHIYYATQ-----HPEQPMVTLEMCMTGLDKEKASVFFK 256

Query: 1244 KSED---YTAKEMTKISGISEILPSFEICDFDFDPCGYSMNAIDGQAFSTIHVTPEDGFS 1414
             S D     AKEMTK+SGIS+I+P  EICDFDF+PCGYSMNAI G AFSTIHVTPEDGFS
Sbjct: 257  TSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFS 316

Query: 1415 YASYEAMGFDTETVGFEALIKRVLRCFKPSEFSVAITC---DGRVDSWGENARVMGYACE 1585
            YASYE +GFD  T+ +  L+KRVLRCF PSEFSVA+T     G   +W +      Y C 
Sbjct: 317  YASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTIFGGHGHAGTWAKELNADAYKCN 376

Query: 1586 EQVKQELPGGGCIVYRCFSSVGNELAYADKEYGTSSPKSTLHCWD 1720
              V+QELP GG ++Y+ F       A  D      SPKS LHC++
Sbjct: 377  NMVEQELPCGGLLIYQSFD------ATEDVPVAVGSPKSVLHCFE 415



 Score =  160 bits (404), Expect(2) = e-107
 Identities = 81/116 (69%), Positives = 91/116 (78%)
 Frame = +1

Query: 598 NPTPQSAIGFEGFEKRLEINFSEAPIFVDPQGLGLRALTRPQIDSILDAARCTIVSQLSN 777
           +P P SAIGFEG+EKRLEI FSEAP+F DP G GLRAL+R QIDS+LD ARCTIVS+LSN
Sbjct: 60  DPPPVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSN 119

Query: 778 DEFDSYVLSESSLFIYSLKIVIKTCGTTKXXXXXXXXXXXXSSLSLPVESVKYSRG 945
            +FDSYVLSESSLFIYS KIVIKTCGTTK              LS+P+ +VKYSRG
Sbjct: 120 KDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRG 175



 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +1

Query: 274 LQYEAPLGYSIEDVRPNGGIEKFRSAAYSNCVRKPS 381
           L YEAPLGYSIEDVRP GG++KF+SAAYSNC  +P+
Sbjct: 16  LMYEAPLGYSIEDVRPAGGVKKFQSAAYSNCSDQPA 51


>ref|NP_001053213.1| Os04g0498600 [Oryza sativa Japonica Group]
            gi|122228392|sp|Q0JC10.1|DCAM_ORYSJ RecName:
            Full=S-adenosylmethionine decarboxylase proenzyme;
            Short=AdoMetDC; Short=SAMDC; Contains: RecName:
            Full=S-adenosylmethionine decarboxylase alpha chain;
            Contains: RecName: Full=S-adenosylmethionine
            decarboxylase beta chain; Flags: Precursor
            gi|6646848|emb|CAA69074.2| S-adenosylmethionine
            decarboxylase [Oryza sativa Japonica Group]
            gi|38345394|emb|CAD41242.2| OSJNBa0067K08.23 [Oryza
            sativa Japonica Group] gi|113564784|dbj|BAF15127.1|
            Os04g0498600 [Oryza sativa Japonica Group]
            gi|215695105|dbj|BAG90296.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215704377|dbj|BAG93811.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215713531|dbj|BAG94668.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|385717676|gb|AFI71273.1|
            S-adenosylmethionine [Oryza sativa Japonica Group]
          Length = 398

 Score =  256 bits (654), Expect(2) = e-107
 Identities = 131/225 (58%), Positives = 154/225 (68%), Gaps = 6/225 (2%)
 Frame = +2

Query: 1064 GDLASGGVAYVIGDPAVPNRNWHVYSASQKQSENNASKAVVTLEMCMTGLDKEKASVFFK 1243
            G L SGG AYVIGDPA P + WH+Y A+Q     +  + +VTLEMCMTGLDKEKASVFFK
Sbjct: 150  GHLKSGGNAYVIGDPAKPGQKWHIYYATQ-----HPEQPMVTLEMCMTGLDKEKASVFFK 204

Query: 1244 KSED---YTAKEMTKISGISEILPSFEICDFDFDPCGYSMNAIDGQAFSTIHVTPEDGFS 1414
             S D     AKEMTK+SGIS+I+P  EICDFDF+PCGYSMNAI G AFSTIHVTPEDGFS
Sbjct: 205  TSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFS 264

Query: 1415 YASYEAMGFDTETVGFEALIKRVLRCFKPSEFSVAITC---DGRVDSWGENARVMGYACE 1585
            YASYE +GFD  T+ +  L+KRVLRCF PSEFSVA+T     G   +W +      Y C 
Sbjct: 265  YASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTIFGGHGHAGTWAKELNADAYKCN 324

Query: 1586 EQVKQELPGGGCIVYRCFSSVGNELAYADKEYGTSSPKSTLHCWD 1720
              V+QELP GG ++Y+ F       A  D      SPKS LHC++
Sbjct: 325  NMVEQELPCGGLLIYQSFD------ATEDVPVAVGSPKSVLHCFE 363



 Score =  160 bits (404), Expect(2) = e-107
 Identities = 81/116 (69%), Positives = 91/116 (78%)
 Frame = +1

Query: 598 NPTPQSAIGFEGFEKRLEINFSEAPIFVDPQGLGLRALTRPQIDSILDAARCTIVSQLSN 777
           +P P SAIGFEG+EKRLEI FSEAP+F DP G GLRAL+R QIDS+LD ARCTIVS+LSN
Sbjct: 8   DPPPVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSN 67

Query: 778 DEFDSYVLSESSLFIYSLKIVIKTCGTTKXXXXXXXXXXXXSSLSLPVESVKYSRG 945
            +FDSYVLSESSLFIYS KIVIKTCGTTK              LS+P+ +VKYSRG
Sbjct: 68  KDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRG 123


>gb|EAY94718.1| hypothetical protein OsI_16495 [Oryza sativa Indica Group]
          Length = 450

 Score =  255 bits (652), Expect(2) = e-106
 Identities = 131/225 (58%), Positives = 154/225 (68%), Gaps = 6/225 (2%)
 Frame = +2

Query: 1064 GDLASGGVAYVIGDPAVPNRNWHVYSASQKQSENNASKAVVTLEMCMTGLDKEKASVFFK 1243
            G L SGG AYVIGDPA P + WH+Y A+Q     +  + +VTLEMCMTGLDKEKASVFFK
Sbjct: 202  GHLKSGGNAYVIGDPAKPGQKWHIYYATQ-----HPEQPMVTLEMCMTGLDKEKASVFFK 256

Query: 1244 KSED---YTAKEMTKISGISEILPSFEICDFDFDPCGYSMNAIDGQAFSTIHVTPEDGFS 1414
             S D     AKEMTK+SGIS+I+P  EICDFDF+PCGYSMNAI G AFSTIHVTPEDGFS
Sbjct: 257  TSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFSTIHVTPEDGFS 316

Query: 1415 YASYEAMGFDTETVGFEALIKRVLRCFKPSEFSVAITC---DGRVDSWGENARVMGYACE 1585
            YASYE +GFD  T+ +  L+KRVLRCF PSEFSVA+T     G   +W +      Y C 
Sbjct: 317  YASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTIFGGHGHAGTWAKELNADAYKCN 376

Query: 1586 EQVKQELPGGGCIVYRCFSSVGNELAYADKEYGTSSPKSTLHCWD 1720
              V+QELP GG ++Y+ F       A  D      SPKS LHC++
Sbjct: 377  NMVEQELPCGGLLIYQSFD------ATEDVPVAVGSPKSVLHCFE 415



 Score =  160 bits (404), Expect(2) = e-106
 Identities = 81/116 (69%), Positives = 91/116 (78%)
 Frame = +1

Query: 598 NPTPQSAIGFEGFEKRLEINFSEAPIFVDPQGLGLRALTRPQIDSILDAARCTIVSQLSN 777
           +P P SAIGFEG+EKRLEI FSEAP+F DP G GLRAL+R QIDS+LD ARCTIVS+LSN
Sbjct: 60  DPPPVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSN 119

Query: 778 DEFDSYVLSESSLFIYSLKIVIKTCGTTKXXXXXXXXXXXXSSLSLPVESVKYSRG 945
            +FDSYVLSESSLFIYS KIVIKTCGTTK              LS+P+ +VKYSRG
Sbjct: 120 KDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRG 175



 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +1

Query: 274 LQYEAPLGYSIEDVRPNGGIEKFRSAAYSNCVRKPS 381
           L YEAPLGYSIEDVRP GG++KF+SAAYSNC  +P+
Sbjct: 16  LMYEAPLGYSIEDVRPAGGVKKFQSAAYSNCSDQPA 51


Top