BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000182
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520668.1| nucleic acid binding protein, putative [Rici...   375   e-102
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin...   371   e-100
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   354   2e-95
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   352   1e-94

>ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540053|gb|EEF41630.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 478

 Score =  375 bits (964), Expect = e-102
 Identities = 186/325 (57%), Positives = 220/325 (67%), Gaps = 8/325 (2%)
 Frame = -1

Query: 951 SQTGLEESMRKLGLDEK---DLYPERPSEPNCVYYMRTGSCGYGDRCRFNHPRNRTLXXX 781
           ++TGLEESM +LGL+     + YPERP  P+CVYYMRTG CGYG+RCR+NHPRNR     
Sbjct: 26  AETGLEESMWRLGLNNSGGGESYPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAAVEA 85

Query: 780 XXXXXXEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGE 601
                 EYPER G+P C+FYLKTGTCKFGA CKFHHPK+ GG +  V LN +GYPLRPGE
Sbjct: 86  AVRATGEYPERIGEPSCEFYLKTGTCKFGASCKFHHPKHGGGSLSHVPLNTHGYPLRPGE 145

Query: 600 NECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPAFYQTVQSSLVPSSQHYEVAPNWQV 421
           NECSYY+KTGQCKFGI CKFHHPQPAG+S+   AP FYQ VQS  +P    Y  A     
Sbjct: 146 NECSYYLKTGQCKFGITCKFHHPQPAGSSLPESAPQFYQPVQSPSIPIPDQYGGASASLR 205

Query: 420 TRSPLISGSYLQGAYGHHVLLPSGMVPMP-WNAYXXXXXXXXXPNTHSIIGPGSFYGVTQ 244
            R PL+ GSY+QGAYG  VL   G+VP+P W+ Y         P+    +G  S YGVTQ
Sbjct: 206 VRPPLLPGSYVQGAYG-PVLFSPGVVPIPGWSPYSAPVSPVLSPSAQPAVGATSLYGVTQ 264

Query: 243 VSPSAPS----YTGXXXXXXXXXXXXSGFQNESTFPERPGQPECIYYVRNGHCKYGSSCR 76
           +S S P+    Y              SG Q E TFPERPG+PEC YY+R G CK+GSSCR
Sbjct: 265 LSSSTPALAGPYPSPSSAAAAAAAPLSGTQKEQTFPERPGEPECQYYLRTGDCKFGSSCR 324

Query: 75  YHHPPERLMPSTSFVLSHMGLPLRP 1
           YHHP +R++P T+ VLS +GLPLRP
Sbjct: 325 YHHPRDRVVPRTNCVLSPLGLPLRP 349



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 8/115 (6%)
 Frame = -1

Query: 759 YPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGENECSYYV 580
           +PER G+P C++YL+TG CKFG+ C++HHP++         L+  G PLRPG   C++Y+
Sbjct: 299 FPERPGEPECQYYLRTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYL 358

Query: 579 KTGQCKFGIACKFHHPQ-------PAGTSVSAP-APAFYQTVQSSLVPSSQHYEV 439
           + G CKFG  CKF HP         A + +  P AP    ++ ++L PSS   E+
Sbjct: 359 RNGHCKFGSTCKFDHPMETMRYSPSASSLIDMPVAPYPVGSLLATLAPSSSSSEL 413


>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
            [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
            protein product [Vitis vinifera]
          Length = 475

 Score =  371 bits (953), Expect = e-100
 Identities = 185/332 (55%), Positives = 225/332 (67%), Gaps = 7/332 (2%)
 Frame = -1

Query: 975  TQSDP-----PHYSQTGLEESMRKLGLDEKDLYPERPSEPNCVYYMRTGSCGYGDRCRFN 811
            +QSDP     P  + +GLEESM +LGL  ++ YPERP   +CVYYM+TG CG+G RCR+N
Sbjct: 13   SQSDPSVEWSPVRAVSGLEESMWRLGLSSRESYPERPGVADCVYYMKTGFCGFGSRCRYN 72

Query: 810  HPRNRTLXXXXXXXXXEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLN 631
            HPR+R+          EYPER G+P C+FYLKTGTCKFGA C+FHHP+N GG +  VSLN
Sbjct: 73   HPRDRSSVSTLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHPRNGGGSMSHVSLN 132

Query: 630  ANGYPLRPGENECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPAFYQTVQSSLVPS-S 454
              GYPLR GE ECSYY+KTGQCKFGI CKFHHPQPAGTS+ A AP FY TVQS  VP+ +
Sbjct: 133  IYGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPTFYPTVQSPSVPTPT 192

Query: 453  QHYEVAPNWQVTRSPLISGSYLQGAYGHHVLLPSGMVPMP-WNAYXXXXXXXXXPNTHSI 277
            Q+   + +W+V R P++ GSY+QG YG  VL P G+VP+P W+ Y         P     
Sbjct: 193  QYGGTSTSWRVPRPPVLPGSYVQGPYG-PVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPT 251

Query: 276  IGPGSFYGVTQVSPSAPSYTGXXXXXXXXXXXXSGFQNESTFPERPGQPECIYYVRNGHC 97
            +G GS YGVTQ+ PS  +  G            S  Q E  FPERPGQ EC YY+R G C
Sbjct: 252  VGAGSVYGVTQL-PSTHTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDC 310

Query: 96   KYGSSCRYHHPPERLMPSTSFVLSHMGLPLRP 1
            K+GSSCRYHHP E ++P T+ VLS +GLPLRP
Sbjct: 311  KFGSSCRYHHPREWVVPKTNCVLSPLGLPLRP 342



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
 Frame = -1

Query: 759 YPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGENECSYYV 580
           +PER GQ  C++YL+TG CKFG+ C++HHP+          L+  G PLRPG   C++Y+
Sbjct: 292 FPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYL 351

Query: 579 KTGQCKFGIACKFHHP------QPAGTSVSAPAPAFYQTVQS--SLVPSSQHYEVAPNW 427
           + G CKFG  CKF HP       P+ +S++    A Y    S  +L PS    ++ P++
Sbjct: 352 QNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSLATLAPSFSSSDLRPDF 410


>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  354 bits (909), Expect = 2e-95
 Identities = 183/353 (51%), Positives = 225/353 (63%), Gaps = 22/353 (6%)
 Frame = -1

Query: 993  METYTK----TQSDPP-----HYSQTGLEESMRKLGLDEKDL-YPERPSEPNCVYYMRTG 844
            M+ Y++    +QSDP         +TGLEE + +LGL E +  YPER +E +C+YY+RTG
Sbjct: 1    MDRYSRGQEGSQSDPALEWTGSGPETGLEEGVWQLGLGETESEYPERSNEQDCMYYLRTG 60

Query: 843  SCGYGDRCRFNHPRNRT-LXXXXXXXXXEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPK 667
             CGYG RCR+NHPR+R  +         EYPER GQP+C++Y++TGTCKFGA CK+HHPK
Sbjct: 61   FCGYGARCRYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPK 120

Query: 666  NVGGIIGAVSLNANGYPLRPGENECSYYVKTGQCKFGIACKFHHPQPAGTSVSA------ 505
              GG    VSLN  GYPLRPGE EC+YY+KTGQCKFG  CKFHHPQP    + A      
Sbjct: 121  QGGGSASPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQ 180

Query: 504  ----PAPAFYQTVQSSLVPSSQHYEVAPNWQVTRSPLISGSYLQGAYGHHVLLPSGMVPM 337
                P P  Y +VQS  VPSSQ Y V     V R PL+ GSY+QG YG  +L PS +VP 
Sbjct: 181  IAPVPGPTLYPSVQSPSVPSSQQYGV----MVARPPLLPGSYVQGPYGPVLLSPS-VVPY 235

Query: 336  P-WNAYXXXXXXXXXPNTHSIIGPGSFYGVTQVSPSAPSYTGXXXXXXXXXXXXSGFQNE 160
            P WN Y         PNT   +G GS YG++ +SPSAP+YTG            S  Q E
Sbjct: 236  PSWNPYPAPVSPVASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKE 295

Query: 159  STFPERPGQPECIYYVRNGHCKYGSSCRYHHPPERLMPSTSFVLSHMGLPLRP 1
              FPERPGQPEC YY++ G CK+ SSCRYHHPPE ++  ++ VLS +GLPLRP
Sbjct: 296  HLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRP 348



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
 Frame = -1

Query: 759 YPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGENECSYYV 580
           +PER GQP C++Y+KTG CKF + C++HHP  +      V L+  G PLRPG   CS+Y 
Sbjct: 298 FPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYT 357

Query: 579 KTGQCKFGIACKFHHP------QPAGTSVS--APAPAFYQTVQSSLVPSSQHYEVAPNWQ 424
           + GQCKFG ACKF HP       P+ +S++    AP    +   +L PSS   ++     
Sbjct: 358 QRGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYLVGSSIGTLAPSSSSSDL----- 412

Query: 423 VTRSPLISG 397
             RS  ISG
Sbjct: 413 --RSKPISG 419


>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
            vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
            product [Vitis vinifera]
          Length = 478

 Score =  354 bits (909), Expect = 2e-95
 Identities = 180/330 (54%), Positives = 212/330 (64%), Gaps = 13/330 (3%)
 Frame = -1

Query: 951  SQTGLEESMRKLGLDEK-DLYPERPSEPNCVYYMRTGSCGYGDRCRFNHPRNRT-LXXXX 778
            ++TGLEE + +LGL    + YPERP E +C+YY++TG CGYG RCRFNHPR+R  +    
Sbjct: 26   AETGLEEPLWQLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTV 85

Query: 777  XXXXXEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGEN 598
                 E+PER GQPVC+FY+KTGTCKFGA CK+HHP+  GG +  V+LN  GYPLRPGE 
Sbjct: 86   RPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEK 145

Query: 597  ECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPA----------FYQTVQSSLVPSSQH 448
            ECSYYVKTG CKFG  CKFHHPQP    +S P PA           Y TVQS  VPSSQ 
Sbjct: 146  ECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPTVQSPSVPSSQQ 205

Query: 447  YEVAPNWQVTRSPLISGSYLQGAYGHHVLLPSGMVPMP-WNAYXXXXXXXXXPNTHSIIG 271
            Y +     V R PL+  SY  G Y   VL+P GMVP P W+ Y         P+T   +G
Sbjct: 206  YGLV----VARPPLLPSSYFHGPYS-PVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVG 260

Query: 270  PGSFYGVTQVSPSAPSYTGXXXXXXXXXXXXSGFQNESTFPERPGQPECIYYVRNGHCKY 91
             G  YG+T +SPSAP+YTG            S  Q E  FPERPGQPEC YY+R G CK+
Sbjct: 261  SGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKF 320

Query: 90   GSSCRYHHPPERLMPSTSFVLSHMGLPLRP 1
            GSSC+YHHPPE   P T+ VLS MGLPLRP
Sbjct: 321  GSSCKYHHPPEWDTPKTNCVLSPMGLPLRP 350



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
 Frame = -1

Query: 759 YPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGENECSYYV 580
           +PER GQP C++Y++TG CKFG+ CK+HHP           L+  G PLRPG  +C++Y 
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYA 359

Query: 579 KTGQCKFGIACKFHHP------QPAGTSVSAPAPAFYQTVQS--SLVPSSQHYEVAPNWQ 424
           + G CKFG  CKF HP       P+ +S++    A Y    S  +L PSS   ++ P   
Sbjct: 360 QRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPE-- 417

Query: 423 VTRSPLISGS 394
                LISGS
Sbjct: 418 -----LISGS 422


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  352 bits (903), Expect = 1e-94
 Identities = 179/330 (54%), Positives = 211/330 (63%), Gaps = 13/330 (3%)
 Frame = -1

Query: 951  SQTGLEESMRKLGLDEK-DLYPERPSEPNCVYYMRTGSCGYGDRCRFNHPRNRT-LXXXX 778
            ++TGLEE +  LGL    + YPERP E +C+YY++TG CGYG RCRFNHPR+R  +    
Sbjct: 66   AETGLEEPLWXLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTV 125

Query: 777  XXXXXEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGEN 598
                 E+PER GQPVC+FY+KTGTCKFGA CK+HHP+  GG +  V+LN  GYPLRPGE 
Sbjct: 126  RPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEK 185

Query: 597  ECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPA----------FYQTVQSSLVPSSQH 448
            ECSYYVKTG CKFG  CKFHHPQP    +S P PA           Y  VQS  VPSSQ 
Sbjct: 186  ECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPXVQSPSVPSSQQ 245

Query: 447  YEVAPNWQVTRSPLISGSYLQGAYGHHVLLPSGMVPMP-WNAYXXXXXXXXXPNTHSIIG 271
            Y +     V R PL+  SY+ G Y   VL+P GMVP P W+ Y         P+T   +G
Sbjct: 246  YGLV----VARPPLLPSSYIHGPYS-PVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVG 300

Query: 270  PGSFYGVTQVSPSAPSYTGXXXXXXXXXXXXSGFQNESTFPERPGQPECIYYVRNGHCKY 91
             G  YG+T +SPSAP+YTG            S  Q E  FPERPGQPEC YY+R G CK+
Sbjct: 301  SGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKF 360

Query: 90   GSSCRYHHPPERLMPSTSFVLSHMGLPLRP 1
            GSSC+YHHPPE   P T+ VLS MGLPLRP
Sbjct: 361  GSSCKYHHPPEWDTPKTNCVLSPMGLPLRP 390



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
 Frame = -1

Query: 759 YPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGENECSYYV 580
           +PER GQP C++Y++TG CKFG+ CK+HHP           L+  G PLRPG  +C++Y 
Sbjct: 340 FPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYA 399

Query: 579 KTGQCKFGIACKFHHP------QPAGTSVSAPAPAFYQTVQS--SLVPSSQHYEVAPNWQ 424
           + G CKFG  CKF HP       P+ +S++    A Y    S  +L PSS   ++ P   
Sbjct: 400 QRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPE-- 457

Query: 423 VTRSPLISGS 394
                LISGS
Sbjct: 458 -----LISGS 462