BLASTX nr result
ID: Coptis21_contig00000157
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000157 (772 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic... 216 6e-54 emb|CBI21843.3| unnamed protein product [Vitis vinifera] 210 3e-52 ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-lik... 207 2e-51 ref|XP_002316901.1| thioredoxin m [Populus trichocarpa] gi|22285... 204 2e-50 gb|ABS84825.1| thioredoxin [Limonium bicolor] 204 2e-50 >ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic-like [Vitis vinifera] Length = 189 Score = 216 bits (549), Expect = 6e-54 Identities = 109/189 (57%), Positives = 136/189 (71%), Gaps = 6/189 (3%) Frame = +3 Query: 75 MATVLESVIIPRHXXXXXXXXXXXXLAPLAQTVKIQ----SLPQFNGLRTHFQYSKC--T 236 MAT L SV++P + P V + SLP+F+GL+ H S + Sbjct: 1 MATALHSVVLPCSSSSDPRAALLPGVMPSPTVVSVGRSSFSLPEFSGLKIHTNSSSALAS 60 Query: 237 FVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPCRMI 416 S+ +R+ RRGGR+VCEAQ+TALDVP VTD TW+SLVLKA PVLVEFWAPWCGPCR+I Sbjct: 61 LNSRTSRVCRRGGRIVCEAQETALDVPIVTDTTWQSLVLKATGPVLVEFWAPWCGPCRII 120 Query: 417 LPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVPRAT 596 PV+AELS++YAGKL +KLNTD+SP ATQYGIRS+PT MIF +G KKDAV+GAVP+ T Sbjct: 121 HPVVAELSEEYAGKLKFFKLNTDDSPSIATQYGIRSVPTTMIFINGEKKDAVLGAVPKTT 180 Query: 597 LVSSIDKFV 623 L +SI+KF+ Sbjct: 181 LTASIEKFL 189 >emb|CBI21843.3| unnamed protein product [Vitis vinifera] Length = 163 Score = 210 bits (534), Expect = 3e-52 Identities = 100/149 (67%), Positives = 123/149 (82%), Gaps = 2/149 (1%) Frame = +3 Query: 183 SLPQFNGLRTHFQYSKC--TFVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLK 356 SLP+F+GL+ H S + S+ +R+ RRGGR+VCEAQ+TALDVP VTD TW+SLVLK Sbjct: 15 SLPEFSGLKIHTNSSSALASLNSRTSRVCRRGGRIVCEAQETALDVPIVTDTTWQSLVLK 74 Query: 357 ADVPVLVEFWAPWCGPCRMILPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTV 536 A PVLVEFWAPWCGPCR+I PV+AELS++YAGKL +KLNTD+SP ATQYGIRS+PT Sbjct: 75 ATGPVLVEFWAPWCGPCRIIHPVVAELSEEYAGKLKFFKLNTDDSPSIATQYGIRSVPTT 134 Query: 537 MIFKDGAKKDAVIGAVPRATLVSSIDKFV 623 MIF +G KKDAV+GAVP+ TL +SI+KF+ Sbjct: 135 MIFINGEKKDAVLGAVPKTTLTASIEKFL 163 >ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-like [Vitis vinifera] gi|302143024|emb|CBI20319.3| unnamed protein product [Vitis vinifera] Length = 188 Score = 207 bits (527), Expect = 2e-51 Identities = 105/188 (55%), Positives = 137/188 (72%), Gaps = 5/188 (2%) Frame = +3 Query: 75 MATVLESVIIPRHXXXXXXXXXXXXLAP---LAQTVKIQSLPQFNGLRTHFQYSKCTFVS 245 MATVL+S+ +PR +P L+ + LP+F+GL+ + + + Sbjct: 1 MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60 Query: 246 --KNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPCRMIL 419 +++R+ RR G VVCEAQ+TA++VP+V D TW+SLVL AD PVLVEFWAPWCGPCRMI Sbjct: 61 AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120 Query: 420 PVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVPRATL 599 PVI EL+KQY GKL CYK+NTDESP AT+YGIRSIPTV+IFK G KK+A+IGAVP++TL Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180 Query: 600 VSSIDKFV 623 +SI+KF+ Sbjct: 181 TTSIEKFL 188 >ref|XP_002316901.1| thioredoxin m [Populus trichocarpa] gi|222859966|gb|EEE97513.1| thioredoxin m [Populus trichocarpa] Length = 190 Score = 204 bits (519), Expect = 2e-50 Identities = 105/190 (55%), Positives = 132/190 (69%), Gaps = 7/190 (3%) Frame = +3 Query: 75 MATVLESVIIPRHXXXXXXXXXXXXLAPLAQTVKIQSL--PQFNGLRTHFQYSKCT---- 236 MATVLES+ P + A T+ +SL PQ GL+ HF S Sbjct: 1 MATVLESLTAPSRSSAVLPKPTTTLVTAFASTINRRSLRFPQLKGLKIHFHSSSTVNRSL 60 Query: 237 -FVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPCRM 413 VS+++ + GR+VCEAQD A+ VP+VTD TW+SLVL+++ PVLVEFWAPWCGPCRM Sbjct: 61 GSVSQSSSRLACAGRIVCEAQDIAVKVPAVTDATWKSLVLESESPVLVEFWAPWCGPCRM 120 Query: 414 ILPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVPRA 593 I PVI EL+ QYAGKL CYKLNTD+ AT+YGIRSIPTV+IFK+G KK+A+IGAVP+ Sbjct: 121 IHPVIDELANQYAGKLKCYKLNTDDCSSIATEYGIRSIPTVIIFKNGEKKEAIIGAVPKT 180 Query: 594 TLVSSIDKFV 623 TL +SI+KF+ Sbjct: 181 TLTTSIEKFL 190 >gb|ABS84825.1| thioredoxin [Limonium bicolor] Length = 187 Score = 204 bits (518), Expect = 2e-50 Identities = 108/192 (56%), Positives = 132/192 (68%), Gaps = 9/192 (4%) Frame = +3 Query: 75 MATVLESVIIPRHXXXXXXXXXXXXLAPLAQTVKIQS---------LPQFNGLRTHFQYS 227 MA V ESV +PR LAP+ + S L +F+GLR S Sbjct: 1 MAAVFESVSVPRSSIVTSAA-----LAPIVSLSSVVSFSCARQPVKLAKFSGLRVISSAS 55 Query: 228 KCTFVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPC 407 + VRR GRVVCE+ DTA++V SVTD +W+SLVL++D PVLVEFWAPWCGPC Sbjct: 56 TRRLRPLRSSGVRRSGRVVCESPDTAVEVQSVTDSSWQSLVLESDSPVLVEFWAPWCGPC 115 Query: 408 RMILPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVP 587 RMI P+I EL+KQY GKL C+K+NTDESP AT+YGIRSIPTVMIFK+G KKDAVIGAVP Sbjct: 116 RMIHPIIDELAKQYTGKLKCFKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDAVIGAVP 175 Query: 588 RATLVSSIDKFV 623 ++TL +SI+KF+ Sbjct: 176 KSTLTTSIEKFL 187