BLASTX nr result

ID: Coptis21_contig00000157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000157
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic...   216   6e-54
emb|CBI21843.3| unnamed protein product [Vitis vinifera]              210   3e-52
ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-lik...   207   2e-51
ref|XP_002316901.1| thioredoxin m [Populus trichocarpa] gi|22285...   204   2e-50
gb|ABS84825.1| thioredoxin [Limonium bicolor]                         204   2e-50

>ref|XP_002272256.1| PREDICTED: thioredoxin M-type, chloroplastic-like [Vitis vinifera]
          Length = 189

 Score =  216 bits (549), Expect = 6e-54
 Identities = 109/189 (57%), Positives = 136/189 (71%), Gaps = 6/189 (3%)
 Frame = +3

Query: 75  MATVLESVIIPRHXXXXXXXXXXXXLAPLAQTVKIQ----SLPQFNGLRTHFQYSKC--T 236
           MAT L SV++P              + P    V +     SLP+F+GL+ H   S    +
Sbjct: 1   MATALHSVVLPCSSSSDPRAALLPGVMPSPTVVSVGRSSFSLPEFSGLKIHTNSSSALAS 60

Query: 237 FVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPCRMI 416
             S+ +R+ RRGGR+VCEAQ+TALDVP VTD TW+SLVLKA  PVLVEFWAPWCGPCR+I
Sbjct: 61  LNSRTSRVCRRGGRIVCEAQETALDVPIVTDTTWQSLVLKATGPVLVEFWAPWCGPCRII 120

Query: 417 LPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVPRAT 596
            PV+AELS++YAGKL  +KLNTD+SP  ATQYGIRS+PT MIF +G KKDAV+GAVP+ T
Sbjct: 121 HPVVAELSEEYAGKLKFFKLNTDDSPSIATQYGIRSVPTTMIFINGEKKDAVLGAVPKTT 180

Query: 597 LVSSIDKFV 623
           L +SI+KF+
Sbjct: 181 LTASIEKFL 189


>emb|CBI21843.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  210 bits (534), Expect = 3e-52
 Identities = 100/149 (67%), Positives = 123/149 (82%), Gaps = 2/149 (1%)
 Frame = +3

Query: 183 SLPQFNGLRTHFQYSKC--TFVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLK 356
           SLP+F+GL+ H   S    +  S+ +R+ RRGGR+VCEAQ+TALDVP VTD TW+SLVLK
Sbjct: 15  SLPEFSGLKIHTNSSSALASLNSRTSRVCRRGGRIVCEAQETALDVPIVTDTTWQSLVLK 74

Query: 357 ADVPVLVEFWAPWCGPCRMILPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTV 536
           A  PVLVEFWAPWCGPCR+I PV+AELS++YAGKL  +KLNTD+SP  ATQYGIRS+PT 
Sbjct: 75  ATGPVLVEFWAPWCGPCRIIHPVVAELSEEYAGKLKFFKLNTDDSPSIATQYGIRSVPTT 134

Query: 537 MIFKDGAKKDAVIGAVPRATLVSSIDKFV 623
           MIF +G KKDAV+GAVP+ TL +SI+KF+
Sbjct: 135 MIFINGEKKDAVLGAVPKTTLTASIEKFL 163


>ref|XP_002282265.2| PREDICTED: thioredoxin M4, chloroplastic-like [Vitis vinifera]
           gi|302143024|emb|CBI20319.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score =  207 bits (527), Expect = 2e-51
 Identities = 105/188 (55%), Positives = 137/188 (72%), Gaps = 5/188 (2%)
 Frame = +3

Query: 75  MATVLESVIIPRHXXXXXXXXXXXXLAP---LAQTVKIQSLPQFNGLRTHFQYSKCTFVS 245
           MATVL+S+ +PR              +P   L+    +  LP+F+GL+     +  +  +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 246 --KNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPCRMIL 419
             +++R+ RR G VVCEAQ+TA++VP+V D TW+SLVL AD PVLVEFWAPWCGPCRMI 
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 420 PVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVPRATL 599
           PVI EL+KQY GKL CYK+NTDESP  AT+YGIRSIPTV+IFK G KK+A+IGAVP++TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

Query: 600 VSSIDKFV 623
            +SI+KF+
Sbjct: 181 TTSIEKFL 188


>ref|XP_002316901.1| thioredoxin m [Populus trichocarpa] gi|222859966|gb|EEE97513.1|
           thioredoxin m [Populus trichocarpa]
          Length = 190

 Score =  204 bits (519), Expect = 2e-50
 Identities = 105/190 (55%), Positives = 132/190 (69%), Gaps = 7/190 (3%)
 Frame = +3

Query: 75  MATVLESVIIPRHXXXXXXXXXXXXLAPLAQTVKIQSL--PQFNGLRTHFQYSKCT---- 236
           MATVLES+  P              +   A T+  +SL  PQ  GL+ HF  S       
Sbjct: 1   MATVLESLTAPSRSSAVLPKPTTTLVTAFASTINRRSLRFPQLKGLKIHFHSSSTVNRSL 60

Query: 237 -FVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPCRM 413
             VS+++  +   GR+VCEAQD A+ VP+VTD TW+SLVL+++ PVLVEFWAPWCGPCRM
Sbjct: 61  GSVSQSSSRLACAGRIVCEAQDIAVKVPAVTDATWKSLVLESESPVLVEFWAPWCGPCRM 120

Query: 414 ILPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVPRA 593
           I PVI EL+ QYAGKL CYKLNTD+    AT+YGIRSIPTV+IFK+G KK+A+IGAVP+ 
Sbjct: 121 IHPVIDELANQYAGKLKCYKLNTDDCSSIATEYGIRSIPTVIIFKNGEKKEAIIGAVPKT 180

Query: 594 TLVSSIDKFV 623
           TL +SI+KF+
Sbjct: 181 TLTTSIEKFL 190


>gb|ABS84825.1| thioredoxin [Limonium bicolor]
          Length = 187

 Score =  204 bits (518), Expect = 2e-50
 Identities = 108/192 (56%), Positives = 132/192 (68%), Gaps = 9/192 (4%)
 Frame = +3

Query: 75  MATVLESVIIPRHXXXXXXXXXXXXLAPLAQTVKIQS---------LPQFNGLRTHFQYS 227
           MA V ESV +PR             LAP+     + S         L +F+GLR     S
Sbjct: 1   MAAVFESVSVPRSSIVTSAA-----LAPIVSLSSVVSFSCARQPVKLAKFSGLRVISSAS 55

Query: 228 KCTFVSKNARIVRRGGRVVCEAQDTALDVPSVTDKTWESLVLKADVPVLVEFWAPWCGPC 407
                   +  VRR GRVVCE+ DTA++V SVTD +W+SLVL++D PVLVEFWAPWCGPC
Sbjct: 56  TRRLRPLRSSGVRRSGRVVCESPDTAVEVQSVTDSSWQSLVLESDSPVLVEFWAPWCGPC 115

Query: 408 RMILPVIAELSKQYAGKLNCYKLNTDESPLTATQYGIRSIPTVMIFKDGAKKDAVIGAVP 587
           RMI P+I EL+KQY GKL C+K+NTDESP  AT+YGIRSIPTVMIFK+G KKDAVIGAVP
Sbjct: 116 RMIHPIIDELAKQYTGKLKCFKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDAVIGAVP 175

Query: 588 RATLVSSIDKFV 623
           ++TL +SI+KF+
Sbjct: 176 KSTLTTSIEKFL 187


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