BLASTX nr result

ID: Coptis21_contig00000141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000141
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320792.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
emb|CBI32286.3| unnamed protein product [Vitis vinifera]              169   3e-40
ref|XP_002270604.1| PREDICTED: SOSS complex subunit B homolog [V...   169   3e-40
emb|CAN67844.1| hypothetical protein VITISV_016667 [Vitis vinifera]   169   3e-40
ref|XP_003560085.1| PREDICTED: SOSS complex subunit B homolog [B...   165   3e-39

>ref|XP_002320792.1| predicted protein [Populus trichocarpa] gi|222861565|gb|EEE99107.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/119 (69%), Positives = 94/119 (78%)
 Frame = -3

Query: 357 NTINTQFILVQKDDELAKEGQEKTCLALVADNTASVHFLLWGTECDAFESGDIIHLTNGI 178
           N INTQFI++ K  ++  EGQ KTCLALVAD TASVHF  WG ECDAFE GDIIHL NGI
Sbjct: 13  NNINTQFIVLDKGKKIL-EGQNKTCLALVADETASVHFQFWGDECDAFEPGDIIHLANGI 71

Query: 177 FSYQNNNLLVLRAGRRGKTEKVGEFTLTFVETPNMSEIRWVRDPNNPRKFVQDVVLSPY 1
           FSY  NN +VLRAGRRG  +KVGEFT+ FVETPNMSEI WV DPN P K++QD V+S +
Sbjct: 72  FSYNRNNSIVLRAGRRGAIKKVGEFTMVFVETPNMSEITWVPDPNRPNKYMQDSVISSH 130


>emb|CBI32286.3| unnamed protein product [Vitis vinifera]
          Length = 155

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/119 (67%), Positives = 97/119 (81%)
 Frame = -3

Query: 357 NTINTQFILVQKDDELAKEGQEKTCLALVADNTASVHFLLWGTECDAFESGDIIHLTNGI 178
           N INTQFI++ K  ++  EG+ KTCL LVAD TA+VHF +WG ECDAFE GDII L +GI
Sbjct: 31  NNINTQFIILDKG-KMTLEGKYKTCLTLVADETAAVHFQMWGDECDAFEGGDIIRLVDGI 89

Query: 177 FSYQNNNLLVLRAGRRGKTEKVGEFTLTFVETPNMSEIRWVRDPNNPRKFVQDVVLSPY 1
           FSY  NNL VLRAG++GK EKVGEF + FVETPNMSEIRW+ DP+NP+K+VQD V+SP+
Sbjct: 90  FSYNRNNL-VLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDPSNPKKYVQDAVISPH 147


>ref|XP_002270604.1| PREDICTED: SOSS complex subunit B homolog [Vitis vinifera]
          Length = 137

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/119 (67%), Positives = 97/119 (81%)
 Frame = -3

Query: 357 NTINTQFILVQKDDELAKEGQEKTCLALVADNTASVHFLLWGTECDAFESGDIIHLTNGI 178
           N INTQFI++ K  ++  EG+ KTCL LVAD TA+VHF +WG ECDAFE GDII L +GI
Sbjct: 13  NNINTQFIILDKG-KMTLEGKYKTCLTLVADETAAVHFQMWGDECDAFEGGDIIRLVDGI 71

Query: 177 FSYQNNNLLVLRAGRRGKTEKVGEFTLTFVETPNMSEIRWVRDPNNPRKFVQDVVLSPY 1
           FSY  NNL VLRAG++GK EKVGEF + FVETPNMSEIRW+ DP+NP+K+VQD V+SP+
Sbjct: 72  FSYNRNNL-VLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDPSNPKKYVQDAVISPH 129


>emb|CAN67844.1| hypothetical protein VITISV_016667 [Vitis vinifera]
          Length = 223

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/119 (67%), Positives = 97/119 (81%)
 Frame = -3

Query: 357 NTINTQFILVQKDDELAKEGQEKTCLALVADNTASVHFLLWGTECDAFESGDIIHLTNGI 178
           N INTQFI++ K  ++  EG+ KTCL LVAD TA+VHF +WG ECDAFE GDII L +GI
Sbjct: 99  NNINTQFIILDKG-KMTLEGKYKTCLTLVADETAAVHFQMWGDECDAFEGGDIIRLVDGI 157

Query: 177 FSYQNNNLLVLRAGRRGKTEKVGEFTLTFVETPNMSEIRWVRDPNNPRKFVQDVVLSPY 1
           FSY  NNL VLRAG++GK EKVGEF + FVETPNMSEIRW+ DP+NP+K+VQD V+SP+
Sbjct: 158 FSYNRNNL-VLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDPSNPKKYVQDAVISPH 215


>ref|XP_003560085.1| PREDICTED: SOSS complex subunit B homolog [Brachypodium distachyon]
          Length = 152

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/123 (62%), Positives = 96/123 (78%), Gaps = 4/123 (3%)
 Frame = -3

Query: 357 NTINTQFILVQKDDELAK----EGQEKTCLALVADNTASVHFLLWGTECDAFESGDIIHL 190
           NT+NT FI++ K    A      G+E+TC++LVAD TA+VHF+LWG EC+AF+ GDI+ L
Sbjct: 22  NTVNTTFIVLDKAARQAHGHAHNGREETCMSLVADETAAVHFMLWGAECEAFQPGDIVRL 81

Query: 189 TNGIFSYQNNNLLVLRAGRRGKTEKVGEFTLTFVETPNMSEIRWVRDPNNPRKFVQDVVL 10
           T GIFSY   N LVLRAG+RG+ EKVGEFT+ FVETPNMSE+RW RDP +PRK VQ+ V+
Sbjct: 82  TGGIFSYHRGNSLVLRAGKRGRAEKVGEFTMLFVETPNMSEMRWGRDPGDPRKMVQEAVV 141

Query: 9   SPY 1
           SPY
Sbjct: 142 SPY 144


Top