BLASTX nr result
ID: Coptis21_contig00000137
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000137 (319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22574.3| unnamed protein product [Vitis vinifera] 83 2e-14 ref|XP_002331830.1| predicted protein [Populus trichocarpa] gi|2... 82 5e-14 gb|ACH54087.1| class III chitinase [Vitis vinifera] 81 1e-13 ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinif... 81 1e-13 ref|XP_003592155.1| Acidic endochitinase [Medicago truncatula] g... 81 1e-13 >emb|CBI22574.3| unnamed protein product [Vitis vinifera] Length = 274 Score = 83.2 bits (204), Expect = 2e-14 Identities = 41/76 (53%), Positives = 52/76 (68%) Frame = -1 Query: 229 QKPNMTIQTSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYV 50 Q P +T P+L + + L+ TS A G I+IYWGQNG EG+L TC TG++SYV Sbjct: 10 QPPARMARTPQSTPLLISLSVLALLQTSYAGG--IAIYWGQNGNEGTLTQTCNTGKYSYV 67 Query: 49 NIAFLNVFGNGRTPEL 2 NIAFLN FGNG+TPE+ Sbjct: 68 NIAFLNKFGNGQTPEI 83 >ref|XP_002331830.1| predicted protein [Populus trichocarpa] gi|222875068|gb|EEF12199.1| predicted protein [Populus trichocarpa] Length = 296 Score = 82.0 bits (201), Expect = 5e-14 Identities = 43/68 (63%), Positives = 52/68 (76%) Frame = -1 Query: 205 TSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNVF 26 T L P+L L+ L+ +S AAG ISIYWGQNG EG+L TCATGR++YVNIAFLN F Sbjct: 8 TLLLLPLLVLL----LIKSSHAAG-GISIYWGQNGNEGTLAQTCATGRYAYVNIAFLNKF 62 Query: 25 GNGRTPEL 2 GNG+TPE+ Sbjct: 63 GNGQTPEM 70 >gb|ACH54087.1| class III chitinase [Vitis vinifera] Length = 297 Score = 80.9 bits (198), Expect = 1e-13 Identities = 39/69 (56%), Positives = 50/69 (72%) Frame = -1 Query: 208 QTSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNV 29 +T P+L + + L+ TS A G I+IYWGQNG EG+L TC TG++SYVNIAFLN Sbjct: 3 RTPQSTPLLISLSVLALLQTSYAGG--IAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNK 60 Query: 28 FGNGRTPEL 2 FGNG+TPE+ Sbjct: 61 FGNGQTPEI 69 >ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinifera] Length = 297 Score = 80.9 bits (198), Expect = 1e-13 Identities = 39/69 (56%), Positives = 50/69 (72%) Frame = -1 Query: 208 QTSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNV 29 +T P+L + + L+ TS A G I+IYWGQNG EG+L TC TG++SYVNIAFLN Sbjct: 3 RTPQSTPLLISLSVLALLQTSYAGG--IAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNK 60 Query: 28 FGNGRTPEL 2 FGNG+TPE+ Sbjct: 61 FGNGQTPEI 69 >ref|XP_003592155.1| Acidic endochitinase [Medicago truncatula] gi|355481203|gb|AES62406.1| Acidic endochitinase [Medicago truncatula] gi|388505424|gb|AFK40778.1| unknown [Medicago truncatula] Length = 297 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/61 (67%), Positives = 50/61 (81%) Frame = -1 Query: 184 LSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNVFGNGRTPE 5 L L+FL TLV+TS A G I+IYWGQNG EG+L CATG++S+VNIAFLN FGNG+TPE Sbjct: 11 LILLFL-TLVATSHAGG--IAIYWGQNGNEGTLSEACATGKYSHVNIAFLNKFGNGQTPE 67 Query: 4 L 2 + Sbjct: 68 M 68