BLASTX nr result

ID: Coptis21_contig00000137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000137
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22574.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002331830.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
gb|ACH54087.1| class III chitinase [Vitis vinifera]                    81   1e-13
ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinif...    81   1e-13
ref|XP_003592155.1| Acidic endochitinase [Medicago truncatula] g...    81   1e-13

>emb|CBI22574.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/76 (53%), Positives = 52/76 (68%)
 Frame = -1

Query: 229 QKPNMTIQTSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYV 50
           Q P    +T    P+L  + +  L+ TS A G  I+IYWGQNG EG+L  TC TG++SYV
Sbjct: 10  QPPARMARTPQSTPLLISLSVLALLQTSYAGG--IAIYWGQNGNEGTLTQTCNTGKYSYV 67

Query: 49  NIAFLNVFGNGRTPEL 2
           NIAFLN FGNG+TPE+
Sbjct: 68  NIAFLNKFGNGQTPEI 83


>ref|XP_002331830.1| predicted protein [Populus trichocarpa] gi|222875068|gb|EEF12199.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/68 (63%), Positives = 52/68 (76%)
 Frame = -1

Query: 205 TSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNVF 26
           T  L P+L L+    L+ +S AAG  ISIYWGQNG EG+L  TCATGR++YVNIAFLN F
Sbjct: 8   TLLLLPLLVLL----LIKSSHAAG-GISIYWGQNGNEGTLAQTCATGRYAYVNIAFLNKF 62

Query: 25  GNGRTPEL 2
           GNG+TPE+
Sbjct: 63  GNGQTPEM 70


>gb|ACH54087.1| class III chitinase [Vitis vinifera]
          Length = 297

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = -1

Query: 208 QTSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNV 29
           +T    P+L  + +  L+ TS A G  I+IYWGQNG EG+L  TC TG++SYVNIAFLN 
Sbjct: 3   RTPQSTPLLISLSVLALLQTSYAGG--IAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNK 60

Query: 28  FGNGRTPEL 2
           FGNG+TPE+
Sbjct: 61  FGNGQTPEI 69


>ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinifera]
          Length = 297

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = -1

Query: 208 QTSSLAPVLSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNV 29
           +T    P+L  + +  L+ TS A G  I+IYWGQNG EG+L  TC TG++SYVNIAFLN 
Sbjct: 3   RTPQSTPLLISLSVLALLQTSYAGG--IAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNK 60

Query: 28  FGNGRTPEL 2
           FGNG+TPE+
Sbjct: 61  FGNGQTPEI 69


>ref|XP_003592155.1| Acidic endochitinase [Medicago truncatula]
           gi|355481203|gb|AES62406.1| Acidic endochitinase
           [Medicago truncatula] gi|388505424|gb|AFK40778.1|
           unknown [Medicago truncatula]
          Length = 297

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/61 (67%), Positives = 50/61 (81%)
 Frame = -1

Query: 184 LSLIFLSTLVSTSLAAGVPISIYWGQNGYEGSLESTCATGRFSYVNIAFLNVFGNGRTPE 5
           L L+FL TLV+TS A G  I+IYWGQNG EG+L   CATG++S+VNIAFLN FGNG+TPE
Sbjct: 11  LILLFL-TLVATSHAGG--IAIYWGQNGNEGTLSEACATGKYSHVNIAFLNKFGNGQTPE 67

Query: 4   L 2
           +
Sbjct: 68  M 68


Top