BLASTX nr result

ID: Coptis21_contig00000121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000121
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA75516.1| vacuolar H+-ATPase c subunit [Citrus unshiu] gi|...   204   4e-50
ref|XP_004152663.1| PREDICTED: V-type proton ATPase 16 kDa prote...   201   3e-49
ref|NP_177693.1| V-type proton ATPase proteolipid subunit c4 [Ar...   200   6e-49
ref|XP_004152664.1| PREDICTED: V-type proton ATPase 16 kDa prote...   199   8e-49
emb|CAH58637.1| vacuolar H+-ATPase C subunit [Plantago major] gi...   199   8e-49

>dbj|BAA75516.1| vacuolar H+-ATPase c subunit [Citrus unshiu]
           gi|6721531|dbj|BAA89596.1| vacuolar H+-ATPase c subunit
           [Citrus unshiu]
          Length = 166

 Score =  204 bits (518), Expect = 4e-50
 Identities = 124/193 (64%), Positives = 124/193 (64%)
 Frame = -3

Query: 906 MSSTAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 727
           MSST FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV
Sbjct: 1   MSSTLFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 60

Query: 726 VMXXXXXXXXXXXXXXXXXXXXXXXXXXMAGVLGIYGLIIAVIISTGINPKAKSYYLFDG 547
           V                           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDG
Sbjct: 61  V---------------------------MAGVLGIYGLIIAVIISTGINPKAKSYYLFDG 93

Query: 546 YXXXXXXXXXXXXXXXXXXAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVG 367
           Y                  AIGIVGDAGVRANAQQPKLFVGM           LYGLIVG
Sbjct: 94  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 153

Query: 366 IILSSRAGQSRAD 328
           IILSSRAGQSRAD
Sbjct: 154 IILSSRAGQSRAD 166


>ref|XP_004152663.1| PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like
           [Cucumis sativus] gi|449514643|ref|XP_004164438.1|
           PREDICTED: V-type proton ATPase 16 kDa proteolipid
           subunit-like [Cucumis sativus]
           gi|4519260|dbj|BAA75515.1| vacuolar H+-ATPase c subunit
           [Citrus unshiu] gi|6721527|dbj|BAA89594.1| vacuolar
           H+-ATPase c subunit [Citrus unshiu]
          Length = 165

 Score =  201 bits (510), Expect = 3e-49
 Identities = 122/191 (63%), Positives = 123/191 (64%)
 Frame = -3

Query: 900 STAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 721
           S+AFSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 
Sbjct: 2   SSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV- 60

Query: 720 XXXXXXXXXXXXXXXXXXXXXXXXXXMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYX 541
                                     MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY 
Sbjct: 61  --------------------------MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYA 94

Query: 540 XXXXXXXXXXXXXXXXXAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGII 361
                            AIGIVGDAGVRANAQQPKLFVGM           LYGLIVGII
Sbjct: 95  HLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGII 154

Query: 360 LSSRAGQSRAD 328
           LSSRAGQSRAD
Sbjct: 155 LSSRAGQSRAD 165


>ref|NP_177693.1| V-type proton ATPase proteolipid subunit c4 [Arabidopsis thaliana]
           gi|27923954|sp|P59229.1|VATL4_ARATH RecName: Full=V-type
           proton ATPase 16 kDa proteolipid subunit c4;
           Short=V-ATPase 16 kDa proteolipid subunit c4; AltName:
           Full=Vacuolar H(+)-ATPase subunit c isoform 4; AltName:
           Full=Vacuolar proton pump 16 kDa proteolipid subunit c4
           gi|5053005|gb|AAD38803.1|AF153677_1 vacuolar H+-pumping
           ATPase 16 kDa subunit c isoform 4 [Arabidopsis thaliana]
           gi|9369380|gb|AAF87129.1|AC006434_25 F10A5.17
           [Arabidopsis thaliana]
           gi|15983400|gb|AAL11568.1|AF424574_1 At1g75630/F10A5_17
           [Arabidopsis thaliana] gi|926935|gb|AAA99936.1| vacuolar
           H+-pumping ATPase 16 kDa proteolipid [Arabidopsis
           thaliana] gi|20466147|gb|AAM19995.1| At1g75630/F10A5_17
           [Arabidopsis thaliana] gi|332197618|gb|AEE35739.1|
           V-type proton ATPase proteolipid subunit c4 [Arabidopsis
           thaliana]
          Length = 166

 Score =  200 bits (508), Expect = 6e-49
 Identities = 121/193 (62%), Positives = 124/193 (64%)
 Frame = -3

Query: 906 MSSTAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 727
           M+S+ FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV
Sbjct: 1   MASSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 60

Query: 726 VMXXXXXXXXXXXXXXXXXXXXXXXXXXMAGVLGIYGLIIAVIISTGINPKAKSYYLFDG 547
           V                           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDG
Sbjct: 61  V---------------------------MAGVLGIYGLIIAVIISTGINPKAKSYYLFDG 93

Query: 546 YXXXXXXXXXXXXXXXXXXAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVG 367
           Y                  AIGIVGDAGVRANAQQPKLFVGM           LYGLIVG
Sbjct: 94  YAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 153

Query: 366 IILSSRAGQSRAD 328
           IILSSRAGQSRA+
Sbjct: 154 IILSSRAGQSRAE 166


>ref|XP_004152664.1| PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like
           [Cucumis sativus] gi|449514640|ref|XP_004164437.1|
           PREDICTED: V-type proton ATPase 16 kDa proteolipid
           subunit-like [Cucumis sativus]
          Length = 165

 Score =  199 bits (507), Expect = 8e-49
 Identities = 121/191 (63%), Positives = 123/191 (64%)
 Frame = -3

Query: 900 STAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 721
           S++FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 
Sbjct: 2   SSSFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV- 60

Query: 720 XXXXXXXXXXXXXXXXXXXXXXXXXXMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYX 541
                                     MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY 
Sbjct: 61  --------------------------MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYA 94

Query: 540 XXXXXXXXXXXXXXXXXAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGII 361
                            AIGIVGDAGVRANAQQPKLFVGM           LYGLIVGII
Sbjct: 95  HLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGII 154

Query: 360 LSSRAGQSRAD 328
           LSSRAGQSRAD
Sbjct: 155 LSSRAGQSRAD 165


>emb|CAH58637.1| vacuolar H+-ATPase C subunit [Plantago major]
           gi|106879597|emb|CAJ38382.1| vacuolar H+-ATPase, subunit
           C 2 [Plantago major]
          Length = 165

 Score =  199 bits (507), Expect = 8e-49
 Identities = 124/193 (64%), Positives = 124/193 (64%)
 Frame = -3

Query: 906 MSSTAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 727
           MSST FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV
Sbjct: 1   MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPV 59

Query: 726 VMXXXXXXXXXXXXXXXXXXXXXXXXXXMAGVLGIYGLIIAVIISTGINPKAKSYYLFDG 547
           V                           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDG
Sbjct: 60  V---------------------------MAGVLGIYGLIIAVIISTGINPKAKSYYLFDG 92

Query: 546 YXXXXXXXXXXXXXXXXXXAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVG 367
           Y                  AIGIVGDAGVRANAQQPKLFVGM           LYGLIVG
Sbjct: 93  YAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVG 152

Query: 366 IILSSRAGQSRAD 328
           IILSSRAGQSRAD
Sbjct: 153 IILSSRAGQSRAD 165


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