BLASTX nr result

ID: Coptis21_contig00000098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000098
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus c...   113   8e-23
ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256...    99   1e-18
gb|ADC68622.1| hypothetical protein [Solanum lycopersicum] gi|36...    92   3e-16
ref|NP_198885.1| uncharacterized protein [Arabidopsis thaliana] ...    86   1e-14
ref|NP_001144411.1| uncharacterized protein LOC100277347 [Zea ma...    86   1e-14

>ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus communis]
           gi|223533690|gb|EEF35425.1| hypothetical protein
           RCOM_0530890 [Ricinus communis]
          Length = 180

 Score =  113 bits (282), Expect = 8e-23
 Identities = 76/221 (34%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
 Frame = -1

Query: 852 MKREGRQQHGMVKNCKXXXXXXXXXXXXSYSKLIINAPLTS-------RPTNHSKFTGKC 694
           MKREGRQ HGMV+ C+             +     + P          RPTNHSKFTGKC
Sbjct: 1   MKREGRQ-HGMVRTCRILPSPWNPRPDSRFINRFDSPPTAGLFTKVLPRPTNHSKFTGKC 59

Query: 693 DRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAVDSKRHQGLNYVGVSANE 514
            + +    ++HP+CKSKDK KGT K++S DV  N +L+SWR VD K   GLN+ G SA+ 
Sbjct: 60  GKPRCNGCHMHPSCKSKDKTKGTQKLKSHDVLSNYRLMSWRVVDGK--PGLNFSGFSASR 117

Query: 513 FLGRLSNYXXXXXXXXXXXXXXXXXXXXXESFGLDVGVTANEFLGQVVEEAIGIDGPNEV 334
            L  + +                           D     ++   + +   +  DG ++ 
Sbjct: 118 ILDHMDD---------------------------DERYVDDDDYEETIAANVD-DGDDD- 148

Query: 333 XXXXXXXXXXXXDGMSFCDVGFVVEQLDGDGDEDWCLVGEL 211
                       D  S+CDVGF+++Q+  +GDEDWCLV EL
Sbjct: 149 -------DIDDGDDTSYCDVGFLLDQV--EGDEDWCLVAEL 180


>ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256024 [Vitis vinifera]
          Length = 218

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 78/230 (33%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
 Frame = -1

Query: 852 MKREGRQQHGMVKNCKXXXXXXXXXXXXSYSKLIINAP-------LTSRPTNHSKFTGKC 694
           MKREGRQ HGMV++ +             +     + P       ++S+PTNHSKFTG C
Sbjct: 1   MKREGRQ-HGMVRSYRILPPPWNPNSQERFVNRFDSPPTAGVFTKVSSKPTNHSKFTGAC 59

Query: 693 DRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAVDSKRHQGLNYVGVSANE 514
            R K +  ++ P CKSK K KGT K++  D+  N +L++WR V+ K   GLN+ G+SA E
Sbjct: 60  CRTKCLDCHLLPACKSKGKTKGTQKMKPRDMVSNHRLITWRLVEGK--PGLNFNGISATE 117

Query: 513 FLGRLSN---YXXXXXXXXXXXXXXXXXXXXXESFGLDVGVTANEFLGQVVEE------A 361
            L  LS    Y                     +   ++    A    G + EE       
Sbjct: 118 VLDHLSREDFYDDQYYNDEDEDEVEACYDGHYDEEKIEDSGHACPDDGPMAEEKEIEAGG 177

Query: 360 IGIDGPNEVXXXXXXXXXXXXDGMSFCDVGFVVEQLDGDGDEDWCLVGEL 211
           I I G ++             D  SF +VGFV EQ+  DGDE WCLV E+
Sbjct: 178 IQISGESD-------ECDVDDDDNSFYEVGFVWEQV--DGDEGWCLVREM 218


>gb|ADC68622.1| hypothetical protein [Solanum lycopersicum]
           gi|365222884|gb|AEW69794.1| Hop-interacting protein
           THI031 [Solanum lycopersicum]
          Length = 191

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 72/219 (32%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
 Frame = -1

Query: 852 MKREGRQQHGMVKNCKXXXXXXXXXXXXSYSKLIINAP-------LTSRPTNHSKFTGKC 694
           M+REGRQ HGMV+                Y     + P       + ++P+NHSKFTGKC
Sbjct: 1   MRREGRQ-HGMVRTYPILPSPWNPRPEPRYMNKSNSPPTAGLFAKVPTKPSNHSKFTGKC 59

Query: 693 DRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAVDSKRHQGLNYVGVSANE 514
            R +    +VHP  KSKDK KGT K++     V+  LV+WR VD++   G N+ G SA  
Sbjct: 60  GRPRCTSCHVHPAAKSKDKTKGTQKLKGCGDVVS--LVTWRVVDAR--PGFNFSGFSATG 115

Query: 513 FLGRLSNYXXXXXXXXXXXXXXXXXXXXXESFGLDVGVTANEFLGQVVEE-AIGIDGPNE 337
            L  L +                       S+ +D  +  +E  G   +E  +  DG   
Sbjct: 116 ILDHLDS---------------------DSSYYMDHEIYYDEDYGYGDQELVVDSDGSPA 154

Query: 336 VXXXXXXXXXXXXDGMSFCDVGFVVEQLDGDGDEDWCLV 220
           +              MSFC+VGFV E  D + DEDWC+V
Sbjct: 155 IGVEIEDNDEEK---MSFCEVGFVWE--DVEEDEDWCVV 188


>ref|NP_198885.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758097|dbj|BAB08541.1| unnamed protein product
           [Arabidopsis thaliana] gi|94442475|gb|ABF19025.1|
           At5g40690 [Arabidopsis thaliana]
           gi|332007199|gb|AED94582.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 210

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 72/229 (31%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
 Frame = -1

Query: 852 MKREGRQQHGMVKNCKXXXXXXXXXXXXSYSKLIINAP-------LTSRPTNHSKFTGKC 694
           MKREG+Q HGMV+  +                 + + P       +TS+PTNHSKFTGKC
Sbjct: 1   MKREGKQ-HGMVRTYRILPPSLNPRPESKLVNPLTSRPTAGLFTKVTSKPTNHSKFTGKC 59

Query: 693 DRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAVDSKRHQGLNYVGVSANE 514
            +A+ +  ++HP  KSK K KG+ K+R++D  V  K+++W+        GL   G SA  
Sbjct: 60  GQARCLDCHMHPVTKSKAKTKGSSKVRTND--VTYKMLTWQVAAGGPRPGLKLSGFSATG 117

Query: 513 FLGRLSNYXXXXXXXXXXXXXXXXXXXXXESFGLDVGVTANEFLGQVVEEAIGID----- 349
            L  +S+                        +  D      E  G VVEE + I      
Sbjct: 118 ILDLMSD-----------------DYGYDHDYDYDEENEEEENRGSVVEEVVNIQSSDDG 160

Query: 348 GPNEVXXXXXXXXXXXXDG-MSFCDVGFVVEQLD--GDGDEDWCLVGEL 211
           G  E             DG MSFCDVG ++  +D   + DE W LV E+
Sbjct: 161 GETEEEGSNDDDDDTDDDGRMSFCDVGMMM-MMDHVEEYDEGWYLVEEM 208


>ref|NP_001144411.1| uncharacterized protein LOC100277347 [Zea mays]
           gi|195641688|gb|ACG40312.1| hypothetical protein [Zea
           mays]
          Length = 214

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 69/227 (30%), Positives = 96/227 (42%), Gaps = 13/227 (5%)
 Frame = -1

Query: 852 MKREGRQQHGMVKNCKXXXXXXXXXXXXSYSKLIIN--APLTSRPTNHSKFTGKCDRAKG 679
           MKR+G  QHG V+  +            S +  ++   A    +PTN S+ TGKC RA+ 
Sbjct: 1   MKRDG-WQHGAVRGSRSKVLRTAAGDDNSDADAVVETAAAAARKPTNASRSTGKCRRARC 59

Query: 678 IRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAVDSKRHQGLNYVGVSANEFLGRL 499
              + HP  K++DK KG  K+R+ DVA+N +LVSWR VD    QG  Y G SA+  L  L
Sbjct: 60  AGCHAHPVSKARDKAKGARKLRACDVALNHRLVSWRVVD----QGPGYSGASASSLLAYL 115

Query: 498 SNYXXXXXXXXXXXXXXXXXXXXXESFGLDVGVTANEFLGQVVEEAIGIDGPNEVXXXXX 319
           +                                  + F+G+  EE  G+D   E+     
Sbjct: 116 AGGSSWHEEEEDDDEGGAAPDGRLSDL-------YDLFVGRGQEED-GVDAVGEIQAVEE 167

Query: 318 XXXXXXXDG-----------MSFCDVGFVVEQLDGDGDEDWCLVGEL 211
                  DG           M FC VG  +     DG+EDW +V E+
Sbjct: 168 QGLLDAKDGEEEEVEDDGDDMGFCMVGXTIALEFSDGEEDWIVVEEI 214


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