BLASTX nr result

ID: Coptis21_contig00000090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000090
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278756.2| PREDICTED: elongation factor 1-gamma-like [V...   310   5e-82
ref|XP_002331090.1| predicted protein [Populus trichocarpa] gi|2...   308   2e-81
gb|ACU24330.1| unknown [Glycine max]                                  308   3e-81
ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [V...   308   3e-81
ref|XP_003592902.1| Elongation factor 1-gamma [Medicago truncatu...   306   8e-81

>ref|XP_002278756.2| PREDICTED: elongation factor 1-gamma-like [Vitis vinifera]
          Length = 424

 Score =  310 bits (795), Expect = 5e-82
 Identities = 150/182 (82%), Positives = 170/182 (93%)
 Frame = -2

Query: 1481 MVLVLHAGSTNKNAYKALIAAEYSGVDVKLVEDFQMGVTNKSPGFLKMNPIGKVPVLETP 1302
            M LVLHAG+TNKNA+KALIAAEYSGV V+LV++F+MGV+NKSP FLKMNPIGKVPVLETP
Sbjct: 1    MALVLHAGNTNKNAFKALIAAEYSGVKVELVKNFEMGVSNKSPEFLKMNPIGKVPVLETP 60

Query: 1301 DGPLFESNAIARYVARLKENNPLFGSSLIEYGRVEQWIDFASLEIDANILRWFIPRVGFA 1122
            DGP+FESNAIARYV RLK +NPL+GS+LIEY  +EQWIDF SLEIDANILRWFIPR+GFA
Sbjct: 61   DGPVFESNAIARYVTRLKADNPLYGSTLIEYAHIEQWIDFGSLEIDANILRWFIPRIGFA 120

Query: 1121 VYLPPAETAAIESLKRALGALDTHLASNTFLVGHSVTLADIVMTCNLSLGFSRIMIKTFT 942
            VYLPPAE AAI +LKRALGAL+THLASNT+LVGHSVTLADI+MTCNL +GFSR+M K+FT
Sbjct: 121  VYLPPAEEAAISALKRALGALNTHLASNTYLVGHSVTLADIIMTCNLVMGFSRVMTKSFT 180

Query: 941  SE 936
            SE
Sbjct: 181  SE 182



 Score =  306 bits (785), Expect = 8e-81
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = -1

Query: 648 SKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENNVSFVTLNKVG 469
           SKM+LDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKV 
Sbjct: 274 SKMVLDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVT 333

Query: 468 GFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDL 289
           GFLQRMDLARKYAFGKML++GSE PFKVKGLWLFRGQEIP+FVIDECYDMELYEW KVDL
Sbjct: 334 GFLQRMDLARKYAFGKMLIVGSEAPFKVKGLWLFRGQEIPQFVIDECYDMELYEWKKVDL 393

Query: 288 ADEAQKERVNQMIEDQEPFEGEALLDAKCFK 196
           +DEAQKERVNQMIEDQEPFEGEALLDAKCFK
Sbjct: 394 SDEAQKERVNQMIEDQEPFEGEALLDAKCFK 424


>ref|XP_002331090.1| predicted protein [Populus trichocarpa] gi|222872818|gb|EEF09949.1|
           predicted protein [Populus trichocarpa]
           gi|283136138|gb|ADB11388.1| gamma class glutathione
           transferase EF1Bgamma3 [Populus trichocarpa]
          Length = 421

 Score =  308 bits (790), Expect = 2e-81
 Identities = 143/151 (94%), Positives = 149/151 (98%)
 Frame = -1

Query: 648 SKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENNVSFVTLNKVG 469
           SKMILDDWKRLYSNTKTNFREVAIKGFW+MYDPEGYSLWFCDYKYNDEN VSFVTLNKVG
Sbjct: 271 SKMILDDWKRLYSNTKTNFREVAIKGFWEMYDPEGYSLWFCDYKYNDENTVSFVTLNKVG 330

Query: 468 GFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDL 289
           GFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIP+FVIDECYDMELYEWTKVD+
Sbjct: 331 GFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDI 390

Query: 288 ADEAQKERVNQMIEDQEPFEGEALLDAKCFK 196
           +DEAQKERV+QMIED EPFEG+ALLDAKCFK
Sbjct: 391 SDEAQKERVSQMIEDYEPFEGDALLDAKCFK 421



 Score =  283 bits (723), Expect = 1e-73
 Identities = 138/182 (75%), Positives = 157/182 (86%)
 Frame = -2

Query: 1481 MVLVLHAGSTNKNAYKALIAAEYSGVDVKLVEDFQMGVTNKSPGFLKMNPIGKVPVLETP 1302
            M L+LHAG TNKNAYK LIAAEYSGVDVKL E+F+M VTNK+P FLKMNPIGKVPVLETP
Sbjct: 1    MALILHAGKTNKNAYKTLIAAEYSGVDVKLAENFEMRVTNKTPEFLKMNPIGKVPVLETP 60

Query: 1301 DGPLFESNAIARYVARLKENNPLFGSSLIEYGRVEQWIDFASLEIDANILRWFIPRVGFA 1122
            +GP+FESNAIARYV RLK +N L+GSSLIEY R+EQWIDFA+ EIDA I +W  PR+G+ 
Sbjct: 61   EGPVFESNAIARYVTRLKADNHLYGSSLIEYARIEQWIDFAATEIDAGISKWLYPRLGYQ 120

Query: 1121 VYLPPAETAAIESLKRALGALDTHLASNTFLVGHSVTLADIVMTCNLSLGFSRIMIKTFT 942
             YLPPAE AAI +LKRALGAL+ HL SNT+LVGHSVTLADI+MTCNL  GFS +M K+FT
Sbjct: 121  PYLPPAEEAAIFALKRALGALNLHLTSNTYLVGHSVTLADIIMTCNLYTGFSYVMTKSFT 180

Query: 941  SE 936
            SE
Sbjct: 181  SE 182


>gb|ACU24330.1| unknown [Glycine max]
          Length = 255

 Score =  308 bits (789), Expect = 3e-81
 Identities = 144/151 (95%), Positives = 147/151 (97%)
 Frame = -1

Query: 648 SKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENNVSFVTLNKVG 469
           S MILD+WKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKVG
Sbjct: 105 SPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVG 164

Query: 468 GFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDL 289
           GFLQRMDLARKYAFGKMLVIGS PPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVD+
Sbjct: 165 GFLQRMDLARKYAFGKMLVIGSVPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDI 224

Query: 288 ADEAQKERVNQMIEDQEPFEGEALLDAKCFK 196
           +DEAQKERVNQMIED EPFEGEALLDAKCFK
Sbjct: 225 SDEAQKERVNQMIEDYEPFEGEALLDAKCFK 255


>ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [Vitis vinifera]
          Length = 423

 Score =  308 bits (789), Expect = 3e-81
 Identities = 143/151 (94%), Positives = 148/151 (98%)
 Frame = -1

Query: 648 SKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENNVSFVTLNKVG 469
           SKMILD+WKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKVG
Sbjct: 273 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVG 332

Query: 468 GFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDL 289
           GFLQRMDLARKYAFGKMLVIGSE PFKVKGLWLFRGQEIP+F+IDECYDMELYEW KVD+
Sbjct: 333 GFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFIIDECYDMELYEWKKVDI 392

Query: 288 ADEAQKERVNQMIEDQEPFEGEALLDAKCFK 196
           +DEAQKERVNQMIEDQEPFEGEALLDAKCFK
Sbjct: 393 SDEAQKERVNQMIEDQEPFEGEALLDAKCFK 423



 Score =  297 bits (761), Expect = 5e-78
 Identities = 146/182 (80%), Positives = 164/182 (90%)
 Frame = -2

Query: 1481 MVLVLHAGSTNKNAYKALIAAEYSGVDVKLVEDFQMGVTNKSPGFLKMNPIGKVPVLETP 1302
            M LVLHAG TNKNAYK LIAAEYSG+ V+LV++F+MGV+NK+P FLKMNPIGKVPVLETP
Sbjct: 1    MALVLHAGKTNKNAYKTLIAAEYSGIKVELVQNFEMGVSNKTPEFLKMNPIGKVPVLETP 60

Query: 1301 DGPLFESNAIARYVARLKENNPLFGSSLIEYGRVEQWIDFASLEIDANILRWFIPRVGFA 1122
            DGP+FESNAIARYV RLK +NPL+GSS IEYG +EQWIDFASLEIDANI  WF PR+G A
Sbjct: 61   DGPVFESNAIARYVTRLKADNPLYGSSPIEYGHIEQWIDFASLEIDANIGHWFRPRIGRA 120

Query: 1121 VYLPPAETAAIESLKRALGALDTHLASNTFLVGHSVTLADIVMTCNLSLGFSRIMIKTFT 942
            VYLPP E AAI +LKRALGAL+THLASNTFLVGHSVTLADIVMTCNL +GFS++M K+FT
Sbjct: 121  VYLPPFEEAAIAALKRALGALNTHLASNTFLVGHSVTLADIVMTCNLYMGFSKLMTKSFT 180

Query: 941  SE 936
            SE
Sbjct: 181  SE 182


>ref|XP_003592902.1| Elongation factor 1-gamma [Medicago truncatula]
           gi|355481950|gb|AES63153.1| Elongation factor 1-gamma
           [Medicago truncatula]
          Length = 418

 Score =  306 bits (785), Expect = 8e-81
 Identities = 141/151 (93%), Positives = 146/151 (96%)
 Frame = -1

Query: 648 SKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENNVSFVTLNKVG 469
           SKMILDDWKRLYSNTK NFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKVG
Sbjct: 268 SKMILDDWKRLYSNTKRNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVG 327

Query: 468 GFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDL 289
           GFLQRMDLARKYAFGKML+IGSEPPFKVKGLWLFRGQEIPKF+IDECYDMELYEWTKVD+
Sbjct: 328 GFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQEIPKFIIDECYDMELYEWTKVDI 387

Query: 288 ADEAQKERVNQMIEDQEPFEGEALLDAKCFK 196
           +DE QKER +QMIED EPFEGEALLDAKCFK
Sbjct: 388 SDEVQKERASQMIEDAEPFEGEALLDAKCFK 418



 Score =  251 bits (640), Expect = 5e-64
 Identities = 124/181 (68%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
 Frame = -2

Query: 1475 LVLHAGST-NKNAYKALIAAEYSGVDVKLVEDFQMGVTNKSPGFLKMNPIGKVPVLETPD 1299
            L+LHA +  NKN YK LIAAEY GV V+L  DFQMGV+NK+P F+ MNPIGKVPVLETPD
Sbjct: 4    LILHAPNNGNKNVYKTLIAAEYVGVQVQLTPDFQMGVSNKTPQFINMNPIGKVPVLETPD 63

Query: 1298 GPLFESNAIARYVARLKENNPLFGSSLIEYGRVEQWIDFASLEIDANILRWFIPRVGFAV 1119
            GP+FESNAIARYVARL  NN LFGSSLI   +++QWIDF+SLEIDANI++ ++PR+GFA 
Sbjct: 64   GPVFESNAIARYVARLGHNN-LFGSSLIHQAQIDQWIDFSSLEIDANIMKLYLPRLGFAT 122

Query: 1118 YLPPAETAAIESLKRALGALDTHLASNTFLVGHSVTLADIVMTCNLSLGFSRIMIKTFTS 939
            Y PP +  AI SLKRAL AL++HLA NT+LVGHSVTLADI+ T NL +GF+++++K+FTS
Sbjct: 123  YFPPVKENAISSLKRALEALNSHLAHNTYLVGHSVTLADIITTSNLYIGFAKLLVKSFTS 182

Query: 938  E 936
            E
Sbjct: 183  E 183


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