BLASTX nr result
ID: Coptis21_contig00000088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000088
(2134 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323872.1| predicted protein [Populus trichocarpa] gi|2... 593 e-167
ref|XP_002529997.1| cystathionine gamma-synthase, putative [Rici... 591 e-166
emb|CBI22246.3| unnamed protein product [Vitis vinifera] 589 e-166
ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chl... 589 e-166
gb|AAC19395.1| cystathionine gamma-synthase [Mesembryanthemum cr... 588 e-165
>ref|XP_002323872.1| predicted protein [Populus trichocarpa] gi|222866874|gb|EEF04005.1|
predicted protein [Populus trichocarpa]
Length = 532
Score = 593 bits (1530), Expect = e-167
Identities = 288/372 (77%), Positives = 330/372 (88%)
Frame = +3
Query: 510 DGITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLF 689
D ITTPVVNT+AY+FK + ELIDFKE R+AS+EYGRYGNPTT+ LE KIS LE AE+TL
Sbjct: 159 DAITTPVVNTSAYFFKKTQELIDFKEKRHASYEYGRYGNPTTQVLEDKISELEGAESTLI 218
Query: 690 LASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVDGLQ 869
LASGMCASTVL+ ALV GGH+VTTTDCYRKTRIF++ +L P M ++VTVIDP DV L+
Sbjct: 219 LASGMCASTVLLLALVPAGGHLVTTTDCYRKTRIFMETFL-PKMGITVTVIDPADVKALE 277
Query: 870 YALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGVLVCVDGTFATPVNQKALSLGAD 1049
AL+ N VSLFFTESPTNP+LRCVDIELVS+LCH KG LVC+DGTFATP+NQKAL+LGAD
Sbjct: 278 SALEINKVSLFFTESPTNPFLRCVDIELVSELCHRKGALVCIDGTFATPLNQKALALGAD 337
Query: 1050 IVLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLR 1229
++L+SATK+IGGHNDV+GGCISGS +V+++IR LHHVLGG LNPNAAYL IRG+KTLHLR
Sbjct: 338 LILHSATKFIGGHNDVLGGCISGSTKVVSEIRNLHHVLGGTLNPNAAYLIIRGMKTLHLR 397
Query: 1230 VKQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDHDIAMRQMTGFGGVVSFEVDGDLHTT 1409
V+QQNSTAL MAK+LEAHPK+ V+YPGLPSHP+H IA +QMTGFGGVVSFEVDGDL T
Sbjct: 398 VQQQNSTALRMAKILEAHPKVRCVYYPGLPSHPEHHIAKKQMTGFGGVVSFEVDGDLFIT 457
Query: 1410 KKFIDALKIAYIAPSFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFED 1589
KF+DALKI YIAPSFGGCESIVDQPAIMSYWDL++ R +GIKDNLVRFSFGVEDFED
Sbjct: 458 SKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSRSEREKYGIKDNLVRFSFGVEDFED 517
Query: 1590 LKADILQALATL 1625
LKADILQAL T+
Sbjct: 518 LKADILQALETI 529
Score = 82.8 bits (203), Expect = 3e-13
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Frame = +2
Query: 32 MAVASCHAR---VLPTFECRSDPGNSKPEPNRXXXXXXXXXXXXVV---GVN--LYRFPP 187
MAV+SC V +FECRSD +S +P++ + G++ + +FPP
Sbjct: 1 MAVSSCPCPKLFVASSFECRSDSSSSADQPSQGRSNSARHGTTPFLSGAGMSSLILKFPP 60
Query: 188 NFVRQLSNKARRNCSNIGVAQVVAASWSNNGS--VPNVAA 301
NFVRQLS KARRNCSNIGVAQ+VAASWSNN + P+ AA
Sbjct: 61 NFVRQLSTKARRNCSNIGVAQIVAASWSNNSAAGAPSAAA 100
>ref|XP_002529997.1| cystathionine gamma-synthase, putative [Ricinus communis]
gi|223530476|gb|EEF32359.1| cystathionine gamma-synthase,
putative [Ricinus communis]
Length = 425
Score = 591 bits (1523), Expect = e-166
Identities = 285/372 (76%), Positives = 329/372 (88%)
Frame = +3
Query: 510 DGITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLF 689
D ITTPVVNT+AY+FK + ELIDFKE R SFEYGRYGNPTT E KISALE AE+TL
Sbjct: 55 DAITTPVVNTSAYFFKKTQELIDFKEKRSVSFEYGRYGNPTTVVAEEKISALEGAESTLI 114
Query: 690 LASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVDGLQ 869
+ASGMCASTV++ ALV GGHIVTTTDCYRKTRIFI+ L P M ++ TVIDP DV+GL+
Sbjct: 115 MASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL-PKMGITATVIDPADVEGLE 173
Query: 870 YALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGVLVCVDGTFATPVNQKALSLGAD 1049
AL++NNVSLFFTESPTNP+LRCVDI+LVS+LCH KG +VC+DGTFATP+NQKAL+LGAD
Sbjct: 174 AALEKNNVSLFFTESPTNPFLRCVDIKLVSELCHRKGAIVCIDGTFATPLNQKALALGAD 233
Query: 1050 IVLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLR 1229
++L+SATK+IGGHNDV+ GCISGS +++++IR LHH+LGG LNPNAAYL IRG+KTLHLR
Sbjct: 234 LILHSATKFIGGHNDVLAGCISGSAKLVSEIRNLHHILGGTLNPNAAYLIIRGMKTLHLR 293
Query: 1230 VKQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDHDIAMRQMTGFGGVVSFEVDGDLHTT 1409
V+QQNSTAL MA++LEAHPK+ V+YPGLPSHP++ IA RQMTGFGGVVSFEVDGDL TT
Sbjct: 294 VQQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEYHIAKRQMTGFGGVVSFEVDGDLMTT 353
Query: 1410 KKFIDALKIAYIAPSFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFED 1589
KF+DALKI YIAPSFGGCESIVDQPAIMSYWDLTQ R +GIKDNLVRFSFGVEDFED
Sbjct: 354 IKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLTQSEREKYGIKDNLVRFSFGVEDFED 413
Query: 1590 LKADILQALATL 1625
+KADILQAL T+
Sbjct: 414 MKADILQALETI 425
>emb|CBI22246.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 589 bits (1519), Expect = e-166
Identities = 289/372 (77%), Positives = 327/372 (87%)
Frame = +3
Query: 510 DGITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLF 689
D ITTPVVNT+AY+FK + ELIDFKE R ASFEYGRYGNPTT LE KISALE AE+T+
Sbjct: 127 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTVI 186
Query: 690 LASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVDGLQ 869
+ASGMCASTV++ ALV GGH+VTTTDCYR+TRIFI+ +L P + V VTVIDP D + L+
Sbjct: 187 MASGMCASTVMLLALVPPGGHMVTTTDCYRRTRIFIETFL-PKLGVEVTVIDPADTEALK 245
Query: 870 YALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGVLVCVDGTFATPVNQKALSLGAD 1049
ALD+NNV+LFFTESPTNP+LRCVDIELVS+LCH KG LVC+D TFATP+NQK LSLGAD
Sbjct: 246 SALDKNNVTLFFTESPTNPFLRCVDIELVSELCHRKGALVCIDSTFATPLNQKTLSLGAD 305
Query: 1050 IVLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLR 1229
+VL+SATKYI GHNDVI GCISGS ++++ IR LHHVLGGVLNPNAAYL IRG+KTLHLR
Sbjct: 306 LVLHSATKYIAGHNDVIAGCISGSEKLVSTIRNLHHVLGGVLNPNAAYLIIRGMKTLHLR 365
Query: 1230 VKQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDHDIAMRQMTGFGGVVSFEVDGDLHTT 1409
V+QQNSTAL MAK+LEAHPK+ V+YPGLPSHP+H IA RQMTGFGGVVSFEVDGDL TT
Sbjct: 366 VQQQNSTALRMAKILEAHPKVKCVYYPGLPSHPEHHIAKRQMTGFGGVVSFEVDGDLTTT 425
Query: 1410 KKFIDALKIAYIAPSFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFED 1589
KF+DALKI YIAPSFGGCESIVDQPAIMSYWDL Q RA +GI+DNLVRFSFGVEDFED
Sbjct: 426 IKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLNQSERAKYGIQDNLVRFSFGVEDFED 485
Query: 1590 LKADILQALATL 1625
LKADILQAL ++
Sbjct: 486 LKADILQALESI 497
Score = 74.3 bits (181), Expect = 1e-10
Identities = 47/91 (51%), Positives = 54/91 (59%), Gaps = 13/91 (14%)
Frame = +2
Query: 32 MAVASCHARVLPTFECRSDP----GNSKPEP----NRXXXXXXXXXXXXVVGVN-----L 172
MAV+SC RV FECRS+P G +PE R + G + +
Sbjct: 1 MAVSSC-PRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSVPSHQIFGASALSSLI 59
Query: 173 YRFPPNFVRQLSNKARRNCSNIGVAQVVAAS 265
+RFPPNFVRQLS KARRNCSNIGVAQVVAAS
Sbjct: 60 FRFPPNFVRQLSTKARRNCSNIGVAQVVAAS 90
>ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chloroplastic-like [Vitis
vinifera]
Length = 531
Score = 589 bits (1519), Expect = e-166
Identities = 289/372 (77%), Positives = 327/372 (87%)
Frame = +3
Query: 510 DGITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLF 689
D ITTPVVNT+AY+FK + ELIDFKE R ASFEYGRYGNPTT LE KISALE AE+T+
Sbjct: 161 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTVI 220
Query: 690 LASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVDGLQ 869
+ASGMCASTV++ ALV GGH+VTTTDCYR+TRIFI+ +L P + V VTVIDP D + L+
Sbjct: 221 MASGMCASTVMLLALVPPGGHMVTTTDCYRRTRIFIETFL-PKLGVEVTVIDPADTEALK 279
Query: 870 YALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGVLVCVDGTFATPVNQKALSLGAD 1049
ALD+NNV+LFFTESPTNP+LRCVDIELVS+LCH KG LVC+D TFATP+NQK LSLGAD
Sbjct: 280 SALDKNNVTLFFTESPTNPFLRCVDIELVSELCHRKGALVCIDSTFATPLNQKTLSLGAD 339
Query: 1050 IVLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLR 1229
+VL+SATKYI GHNDVI GCISGS ++++ IR LHHVLGGVLNPNAAYL IRG+KTLHLR
Sbjct: 340 LVLHSATKYIAGHNDVIAGCISGSEKLVSTIRNLHHVLGGVLNPNAAYLIIRGMKTLHLR 399
Query: 1230 VKQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDHDIAMRQMTGFGGVVSFEVDGDLHTT 1409
V+QQNSTAL MAK+LEAHPK+ V+YPGLPSHP+H IA RQMTGFGGVVSFEVDGDL TT
Sbjct: 400 VQQQNSTALRMAKILEAHPKVKCVYYPGLPSHPEHHIAKRQMTGFGGVVSFEVDGDLTTT 459
Query: 1410 KKFIDALKIAYIAPSFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFED 1589
KF+DALKI YIAPSFGGCESIVDQPAIMSYWDL Q RA +GI+DNLVRFSFGVEDFED
Sbjct: 460 IKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLNQSERAKYGIQDNLVRFSFGVEDFED 519
Query: 1590 LKADILQALATL 1625
LKADILQAL ++
Sbjct: 520 LKADILQALESI 531
Score = 84.3 bits (207), Expect = 1e-13
Identities = 57/125 (45%), Positives = 69/125 (55%), Gaps = 18/125 (14%)
Frame = +2
Query: 32 MAVASCHARVLPTFECRSDP----GNSKPEP----NRXXXXXXXXXXXXVVGVN-----L 172
MAV+SC RV FECRS+P G +PE R + G + +
Sbjct: 1 MAVSSC-PRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSVPSHQIFGASALSSLI 59
Query: 173 YRFPPNFVRQLSNKARRNCSNIGVAQVVAASWSNNGSV-----PNVAAVDSVTTDVNVNE 337
+RFPPNFVRQLS KARRNCSNIGVAQVVAASWS + + + AA SV V V+
Sbjct: 60 FRFPPNFVRQLSTKARRNCSNIGVAQVVAASWSADSAAAAAASASAAAAASVEASVEVSV 119
Query: 338 VVAVG 352
V + G
Sbjct: 120 VESSG 124
>gb|AAC19395.1| cystathionine gamma-synthase [Mesembryanthemum crystallinum]
Length = 548
Score = 588 bits (1515), Expect = e-165
Identities = 284/372 (76%), Positives = 326/372 (87%)
Frame = +3
Query: 510 DGITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLF 689
D ITTPVVNT+AY+FK + +LIDFKEGR SFEYGRYGNPT+ LE KISALE AE+T+
Sbjct: 178 DAITTPVVNTSAYFFKKTADLIDFKEGRQTSFEYGRYGNPTSVVLEDKISALEGAESTIL 237
Query: 690 LASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVDGLQ 869
LASGMCAS VLM ALV GGHIVTTTDCYRKTRIFI+ +L P M ++ TVIDP DV+GL+
Sbjct: 238 LASGMCASIVLMLALVPAGGHIVTTTDCYRKTRIFIETFL-PKMGITATVIDPADVEGLK 296
Query: 870 YALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGVLVCVDGTFATPVNQKALSLGAD 1049
ALD+NNV+LFFTESPTNP+LRCVDI+LVS+LCH KG LVC+DGTFATP+NQKAL+LGAD
Sbjct: 297 SALDENNVTLFFTESPTNPFLRCVDIKLVSELCHKKGALVCIDGTFATPLNQKALALGAD 356
Query: 1050 IVLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLR 1229
V++S TK+IGGHNDV+GGCISGS +I+ IR HHVLGG LNPNAAYL IRG+KTLHLR
Sbjct: 357 FVVHSMTKFIGGHNDVLGGCISGSKNLISTIRTFHHVLGGTLNPNAAYLMIRGMKTLHLR 416
Query: 1230 VKQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDHDIAMRQMTGFGGVVSFEVDGDLHTT 1409
V+QQN+TAL MA++LEAHPK+ V+YPGLPSHP+H +A RQMTGFGGVVSFEVDGDL TT
Sbjct: 417 VQQQNTTALRMAEILEAHPKVKHVYYPGLPSHPEHKLAKRQMTGFGGVVSFEVDGDLLTT 476
Query: 1410 KKFIDALKIAYIAPSFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFED 1589
KF+D+LKIAYIAPSFGGCESIVDQPAIMSYWDL+ R +GIKDNLVRFSFGVEDFED
Sbjct: 477 AKFVDSLKIAYIAPSFGGCESIVDQPAIMSYWDLSPSDRLKYGIKDNLVRFSFGVEDFED 536
Query: 1590 LKADILQALATL 1625
LKAD+LQAL +
Sbjct: 537 LKADVLQALEAI 548
Score = 89.0 bits (219), Expect = 5e-15
Identities = 53/106 (50%), Positives = 58/106 (54%), Gaps = 16/106 (15%)
Frame = +2
Query: 41 ASCHARVLPTFECRSDPGN--------SKPEPNRXXXXXXXXXXXXVVGVNLYRFPPNFV 196
+SC ARVLP FECR +P + K P + RFPPNFV
Sbjct: 6 SSCCARVLPPFECRPEPADFSTAAAKQEKNIPKSFFGGANGRLFSSSSSSLILRFPPNFV 65
Query: 197 RQLSNKARRNCSNIGVAQVVAASWSNN--------GSVPNVAAVDS 310
RQLS KARRNCSNIGVAQVVAASWSNN G VP AVD+
Sbjct: 66 RQLSTKARRNCSNIGVAQVVAASWSNNSDAGATSCGGVPAATAVDA 111