BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000081
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463160.1| hypothetical protein SORBIDRAFT_02g038750 [S...   113   8e-39
ref|NP_001150396.1| mitochondrial import inner membrane transloc...   110   1e-37
gb|ACN26576.1| unknown [Zea mays] gi|414590821|tpg|DAA41392.1| T...   110   2e-37
tpg|DAA41391.1| TPA: putative mitochondrial import inner membran...   109   3e-37
gb|ACG28579.1| mitochondrial import inner membrane translocase s...   108   3e-37

>ref|XP_002463160.1| hypothetical protein SORBIDRAFT_02g038750 [Sorghum bicolor]
           gi|241926537|gb|EER99681.1| hypothetical protein
           SORBIDRAFT_02g038750 [Sorghum bicolor]
          Length = 222

 Score =  113 bits (283), Expect(2) = 8e-39
 Identities = 67/158 (42%), Positives = 83/158 (52%), Gaps = 16/158 (10%)
 Frame = -3

Query: 586 VWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXXXXXXXXX 407
           VWGGLFS FDC MVY R KEDPWNSIVAGAATGGFL MRQG+ A+G+S            
Sbjct: 68  VWGGLFSTFDCAMVYARQKEDPWNSIVAGAATGGFLSMRQGMGAAGRSALMGGILLALIE 127

Query: 406 XXXXXLNTLFA--------PNLQNIPIENNPYQTIPMSKEV--------EKEKAGWFGTG 275
                LN + A        PNL    +  NP+  +P +  V             GWF  G
Sbjct: 128 GAGLMLNRVLANPPLPADDPNL-TAAMGGNPFPGLPQAPPVVAPPEAASSSGAGGWF--G 184

Query: 274 GMFGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 161
           G+FG+              E+ +SFDTP++ +PSF+YK
Sbjct: 185 GLFGKKEEEKKPSAGGGKSEILESFDTPSSPIPSFEYK 222



 Score = 73.9 bits (180), Expect(2) = 8e-39
 Identities = 33/43 (76%), Positives = 35/43 (81%)
 Frame = -2

Query: 812 VGHTENSREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSP 684
           +G  E SREPCPDRILDD+GGAF MG VGGS FHFIKG  NSP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFIKGIYNSP 43


>ref|NP_001150396.1| mitochondrial import inner membrane translocase subunit Tim17 [Zea
           mays] gi|195638924|gb|ACG38930.1| mitochondrial import
           inner membrane translocase subunit Tim17 [Zea mays]
          Length = 222

 Score =  110 bits (275), Expect(2) = 1e-37
 Identities = 68/156 (43%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
 Frame = -3

Query: 586 VWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXXXXXXXXX 407
           VWGGLFS FDC MVY R KEDPWNSIVAGAATGGFL MRQG+ A+G+S            
Sbjct: 68  VWGGLFSTFDCAMVYARQKEDPWNSIVAGAATGGFLSMRQGMGAAGRSALMGGILLALIE 127

Query: 406 XXXXXLNTLFA--------PNLQNIPIENNPYQTIPMSKEV--EKEKAGWFGT----GGM 269
                LN + A        PNL    +  NP+  +P +  V    E A   G     GG+
Sbjct: 128 GAGLMLNRVLANPPLPADDPNL-TAAMGGNPFPGLPQAPPVVAPPEAATSSGVGGLFGGL 186

Query: 268 FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 161
           FGR              E+ +SFDTP++ +PSF+YK
Sbjct: 187 FGRKEEDKKPSAVGGKSEILESFDTPSSPIPSFEYK 222



 Score = 72.8 bits (177), Expect(2) = 1e-37
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = -2

Query: 812 VGHTENSREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSP 684
           +G  E SREPCPDRILDD+GGAF MG VGGS +HFIKG  NSP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAYHFIKGIYNSP 43


>gb|ACN26576.1| unknown [Zea mays] gi|414590821|tpg|DAA41392.1| TPA: putative
           mitochondrial import inner membrane translocase subunit
           TIM17 family protein isoform 1 [Zea mays]
           gi|414590822|tpg|DAA41393.1| TPA: putative mitochondrial
           import inner membrane translocase subunit TIM17 family
           protein isoform 2 [Zea mays]
          Length = 222

 Score =  110 bits (274), Expect(2) = 2e-37
 Identities = 67/156 (42%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
 Frame = -3

Query: 586 VWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXXXXXXXXX 407
           VWGGLFS FDC MVY R KEDPWNSIVAGAATGGFL MRQG+ A+G+S            
Sbjct: 68  VWGGLFSTFDCAMVYARQKEDPWNSIVAGAATGGFLSMRQGMGAAGRSALMGGILLALIE 127

Query: 406 XXXXXLNTLFA--------PNLQNIPIENNPYQTIPMSKEV----EKEKAGWFG--TGGM 269
                LN + A        PNL    +  NP+  +P +  V    E   +   G   GG+
Sbjct: 128 GAGLMLNRVLANPPLPADDPNL-TAAMGGNPFPGLPQAPPVVAPPEATTSSGVGGLFGGL 186

Query: 268 FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 161
           FGR              E+ +SFDTP++ +PSF+YK
Sbjct: 187 FGRKEEEKKPSAGGGKSEILESFDTPSSPIPSFEYK 222



 Score = 72.8 bits (177), Expect(2) = 2e-37
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = -2

Query: 812 VGHTENSREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSP 684
           +G  E SREPCPDRILDD+GGAF MG VGGS +HFIKG  NSP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAYHFIKGIYNSP 43


>tpg|DAA41391.1| TPA: putative mitochondrial import inner membrane translocase
           subunit TIM17 family protein [Zea mays]
          Length = 233

 Score =  109 bits (272), Expect(2) = 3e-37
 Identities = 67/159 (42%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
 Frame = -3

Query: 586 VWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXXXXXXXXX 407
           VWGGLFS FDC MVY R KEDPWNSIVAGAATGGFL MRQG+ A+G+S            
Sbjct: 68  VWGGLFSTFDCAMVYARQKEDPWNSIVAGAATGGFLSMRQGMGAAGRSALMGGILLALIE 127

Query: 406 XXXXXLNTLFA--------PNLQNIPIENNPYQTIPMSKEV----EKEKAGWFG--TGGM 269
                LN + A        PNL    +  NP+  +P +  V    E   +   G   GG+
Sbjct: 128 GAGLMLNRVLANPPLPADDPNL-TAAMGGNPFPGLPQAPPVVAPPEATTSSGVGGLFGGL 186

Query: 268 FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK*DG 152
           FGR              E+ +SFDTP++ +PSF+Y  +G
Sbjct: 187 FGRKEEEKKPSAGGGKSEILESFDTPSSPIPSFEYNYNG 225



 Score = 72.8 bits (177), Expect(2) = 3e-37
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = -2

Query: 812 VGHTENSREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSP 684
           +G  E SREPCPDRILDD+GGAF MG VGGS +HFIKG  NSP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAYHFIKGIYNSP 43


>gb|ACG28579.1| mitochondrial import inner membrane translocase subunit Tim17 [Zea
           mays] gi|414887512|tpg|DAA63526.1| TPA: putative
           mitochondrial import inner membrane translocase subunit
           TIM17 family protein [Zea mays]
          Length = 220

 Score =  108 bits (269), Expect(2) = 3e-37
 Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 16/158 (10%)
 Frame = -3

Query: 586 VWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXXXXXXXXX 407
           VWGGLFS FDC MVY R KEDPWNSI+AGAATGGFL MRQG+ A+G+S            
Sbjct: 68  VWGGLFSTFDCAMVYARQKEDPWNSIIAGAATGGFLSMRQGMGAAGRSALMGGVLLALIE 127

Query: 406 XXXXXLNTLFA--------PNLQNIPIENNPYQTIPMSKEV--------EKEKAGWFGTG 275
                LN + A        PNL    + +NP+  +P +  V             GWF  G
Sbjct: 128 GAGLMLNRVLANPPLPAEDPNL-TAAMGDNPFPGLPQAPPVVAPPEVASSSGAGGWF--G 184

Query: 274 GMFGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 161
           G+ GR              E+ +SFDTP++ +PSF+YK
Sbjct: 185 GLIGR--KDEEKKSSAGKSEILESFDTPSSPIPSFEYK 220



 Score = 73.9 bits (180), Expect(2) = 3e-37
 Identities = 33/43 (76%), Positives = 35/43 (81%)
 Frame = -2

Query: 812 VGHTENSREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSP 684
           +G  E SREPCPDRILDD+GGAF MG VGGS FHFIKG  NSP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFIKGIYNSP 43