BLASTX nr result
ID: Coptis21_contig00000073
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000073
(475 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [S... 139 5e-34
ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [S... 139 7e-34
ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [S... 139 2e-33
ref|XP_002439821.1| hypothetical protein SORBIDRAFT_09g020720 [S... 139 3e-33
ref|XP_003559870.1| PREDICTED: uncharacterized protein LOC100832... 143 8e-33
>ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [Sorghum bicolor]
gi|241933195|gb|EES06340.1| hypothetical protein
SORBIDRAFT_04g004660 [Sorghum bicolor]
Length = 1145
Score = 139 bits (351), Expect(2) = 5e-34
Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 9/142 (6%)
Frame = -3
Query: 416 VRGHAVDNSRDVVPYNPYLSKMFDCHINVEVCARIRCVKYIHKYIFKGHDRTTVVF---- 249
VRGH +DN R VVPYNPYL ++F+CHINVE C I+ VKY+ KYI+KGHDR +V
Sbjct: 321 VRGHELDN-RWVVPYNPYLLRLFNCHINVEACGSIKAVKYLFKYIYKGHDRASVAVREAD 379
Query: 248 -----NGLDEIQQ*LDT*YIGPPEAVWRLFRFSLHQEKPSVVRLALHLPRMHRVVYNPNE 84
+DEI+Q D ++ PPEA+WR++ F + PSV+ L LHLP MH V ++ E
Sbjct: 380 KEDNEGNIDEIKQYRDARWVTPPEALWRIYGFDISDRSPSVLSLQLHLPNMHMVSFHQRE 439
Query: 83 STDAILLRAQQQKSTLTAFFER 18
+L R ++S LTA+FE+
Sbjct: 440 GVRRVLNRPGVERSMLTAYFEK 461
Score = 29.6 bits (65), Expect(2) = 5e-34
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 469 YPIYRRRDTGKKYKV 425
YP+YRRRD G+K KV
Sbjct: 307 YPVYRRRDNGRKEKV 321
>ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [Sorghum bicolor]
gi|241937278|gb|EES10423.1| hypothetical protein
SORBIDRAFT_06g001660 [Sorghum bicolor]
Length = 1484
Score = 139 bits (350), Expect(2) = 7e-34
Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 9/142 (6%)
Frame = -3
Query: 416 VRGHAVDNSRDVVPYNPYLSKMFDCHINVEVCARIRCVKYIHKYIFKGHDRTTVVF---- 249
VRGH +DN R VVPYNPYL ++F+CHINVE C I+ VKY+ KYI+KGHDRT+V
Sbjct: 658 VRGHELDN-RWVVPYNPYLLRLFNCHINVEACGSIKAVKYLFKYIYKGHDRTSVAMREAD 716
Query: 248 -----NGLDEIQQ*LDT*YIGPPEAVWRLFRFSLHQEKPSVVRLALHLPRMHRVVYNPNE 84
+DEI+Q +D ++ P EA+WR++ F + PSV+ L LHLP MH V + E
Sbjct: 717 KEDNEGNIDEIKQYMDARWVTPSEALWRIYGFDISDRSPSVLSLQLHLPNMHMVSFYQRE 776
Query: 83 STDAILLRAQQQKSTLTAFFER 18
+L R ++S LTA+FE+
Sbjct: 777 GVRRVLNRPGVERSMLTAYFEK 798
Score = 29.6 bits (65), Expect(2) = 7e-34
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 469 YPIYRRRDTGKKYKV 425
YP+YRRRD G+K KV
Sbjct: 644 YPVYRRRDNGRKEKV 658
>ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [Sorghum bicolor]
gi|241941854|gb|EES14999.1| hypothetical protein
SORBIDRAFT_07g020600 [Sorghum bicolor]
Length = 1028
Score = 139 bits (351), Expect(2) = 2e-33
Identities = 71/146 (48%), Positives = 93/146 (63%), Gaps = 9/146 (6%)
Frame = -3
Query: 416 VRGHAVDNSRDVVPYNPYLSKMFDCHINVEVCARIRCVKYIHKYIFKGHDRTTVVF---- 249
VRGH +DN R VVPYNPYL +F+CHINVE C I+ VKY+ KYI+KGHDR +V
Sbjct: 199 VRGHELDN-RWVVPYNPYLLYLFNCHINVEACGSIKAVKYLFKYIYKGHDRASVAVREVD 257
Query: 248 -----NGLDEIQQ*LDT*YIGPPEAVWRLFRFSLHQEKPSVVRLALHLPRMHRVVYNPNE 84
+DEI+Q D ++ PPEA+WR++ F L PSV+ L LHLP MH V ++ E
Sbjct: 258 KEDSEGNIDEIKQYRDARWVTPPEALWRIYGFDLSDRNPSVLSLQLHLPDMHMVSFHRRE 317
Query: 83 STDAILLRAQQQKSTLTAFFERCASD 6
+L R +KS LTA+FE+ +D
Sbjct: 318 GVRRVLDRPGVEKSMLTAYFEKNRTD 343
Score = 28.1 bits (61), Expect(2) = 2e-33
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 469 YPIYRRRDTGKKYKV 425
YPIYRRR+ G+K KV
Sbjct: 185 YPIYRRREDGRKEKV 199
>ref|XP_002439821.1| hypothetical protein SORBIDRAFT_09g020720 [Sorghum bicolor]
gi|241945106|gb|EES18251.1| hypothetical protein
SORBIDRAFT_09g020720 [Sorghum bicolor]
Length = 927
Score = 139 bits (350), Expect(2) = 3e-33
Identities = 70/146 (47%), Positives = 93/146 (63%), Gaps = 9/146 (6%)
Frame = -3
Query: 416 VRGHAVDNSRDVVPYNPYLSKMFDCHINVEVCARIRCVKYIHKYIFKGHDRTTVVF---- 249
VRGH +DN R VVPYNPYL ++F+CHINVE C I+ VKY+ KYI+KGHDR +V
Sbjct: 92 VRGHELDN-RWVVPYNPYLLRLFNCHINVEACGSIKAVKYLFKYIYKGHDRASVAVREAD 150
Query: 248 -----NGLDEIQQ*LDT*YIGPPEAVWRLFRFSLHQEKPSVVRLALHLPRMHRVVYNPNE 84
+DEI+Q D ++ PPEA+WR++ F L PSV+ L LHLP MH V ++ +
Sbjct: 151 KEDSEGNIDEIKQYRDARWVTPPEALWRIYGFDLSDRYPSVLSLQLHLPDMHMVSFHRRQ 210
Query: 83 STDAILLRAQQQKSTLTAFFERCASD 6
+L R KS LTA+FE+ +D
Sbjct: 211 GIQRVLDRPGADKSMLTAYFEKNRTD 236
Score = 27.7 bits (60), Expect(2) = 3e-33
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 469 YPIYRRRDTGKKYKV 425
YP+YRRR+ G+K KV
Sbjct: 78 YPVYRRREDGRKEKV 92
>ref|XP_003559870.1| PREDICTED: uncharacterized protein LOC100832196 [Brachypodium
distachyon]
Length = 1451
Score = 143 bits (360), Expect(2) = 8e-33
Identities = 73/139 (52%), Positives = 99/139 (71%), Gaps = 6/139 (4%)
Frame = -3
Query: 419 NVRGHAVDNSRDVVPYNPYLSKMFDCHINVEVCARIRCVKYIHKYIFKGHDRTTVVF--- 249
+VRG +DN R VVPYNPYL +MF+CHINVEVC+ I+ VKYI+KYI+KG D+T++ F
Sbjct: 817 HVRGQTLDN-RWVVPYNPYLLRMFNCHINVEVCSSIKAVKYIYKYIYKGGDQTSMNFEQP 875
Query: 248 --NG-LDEIQQ*LDT*YIGPPEAVWRLFRFSLHQEKPSVVRLALHLPRMHRVVYNPNEST 78
NG +DEI++ +D +I PPEA+WR+F F+L+ PSV++L LHLP MH V +N +
Sbjct: 876 DNNGNIDEIKRYIDARWITPPEALWRIFGFNLYDNSPSVLQLPLHLPGMHMVSFNAKDDL 935
Query: 77 DAILLRAQQQKSTLTAFFE 21
I R + KS LT +FE
Sbjct: 936 RDIATREKASKSMLTEYFE 954
Score = 22.3 bits (46), Expect(2) = 8e-33
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 469 YPIYRRRDTG 440
YP+Y RRD G
Sbjct: 804 YPVYHRRDNG 813