BLASTX nr result

ID: Coptis21_contig00000072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000072
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308765.1| predicted protein [Populus trichocarpa] gi|2...   235   2e-59
ref|NP_001238056.1| uncharacterized protein LOC100527827 [Glycin...   234   3e-59
ref|XP_003546197.1| PREDICTED: uncharacterized protein LOC100776...   233   7e-59
ref|XP_003529675.1| PREDICTED: uncharacterized protein LOC100796...   233   1e-58
gb|AFK43648.1| unknown [Medicago truncatula]                          232   1e-58

>ref|XP_002308765.1| predicted protein [Populus trichocarpa] gi|222854741|gb|EEE92288.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  235 bits (600), Expect = 2e-59
 Identities = 127/234 (54%), Positives = 152/234 (64%), Gaps = 3/234 (1%)
 Frame = -1

Query: 879 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 700
           IVLKV MHCEACARKV R+L+ FEGVE+V TD K+  V+VKGK ADP KVCER+QKKSGR
Sbjct: 31  IVLKVDMHCEACARKVARALKGFEGVEEVSTDSKASKVVVKGKAADPSKVCERLQKKSGR 90

Query: 699 KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXPVITLVLKINMHCEACCQVLQKRIRKI 529
           KVE+ISPL                         PV+T+VL + MHCEAC QVLQKR+RKI
Sbjct: 91  KVELISPLPKPPEEKKEEAKDPPKEEEKKDEPPPVVTVVLNVRMHCEACAQVLQKRVRKI 150

Query: 528 DGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPXXXXXXXXXXXXXXXXXX 349
            GVESVET+L N+QV+VKG++DP+ +V+ VYKKTRKQA +V                   
Sbjct: 151 QGVESVETNLANDQVIVKGVVDPSKLVDDVYKKTRKQASIV---KDEEKKEEEKKEEKKE 207

Query: 348 XXXXXXXXXXXXXXEGDSKTDVKKSEYWPPKYYIEYAYPPEIFSDENPNACTVM 187
                         E D   D+K+SEYWP KYY E+AY P+IFSDENPNAC+VM
Sbjct: 208 EKEGEKKDGEEAKAEDDKNLDIKRSEYWPSKYYSEFAYAPQIFSDENPNACSVM 261


>ref|NP_001238056.1| uncharacterized protein LOC100527827 [Glycine max]
           gi|255633318|gb|ACU17016.1| unknown [Glycine max]
          Length = 262

 Score =  234 bits (598), Expect = 3e-59
 Identities = 123/234 (52%), Positives = 153/234 (65%), Gaps = 3/234 (1%)
 Frame = -1

Query: 879 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 700
           IVLKV MHCEACARKV ++L+ F+GVE+V  D ++  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 31  IVLKVDMHCEACARKVAKALKGFQGVEEVSADSRTSKVVVKGKAADPIKVCERLQKKSGK 90

Query: 699 KVEIISPLXXXXXXXXXXXXXXXXXXXXXXP---VITLVLKINMHCEACCQVLQKRIRKI 529
           KVE+ISPL                          V+T+VLK+ MHCEAC QV+QKRIRKI
Sbjct: 91  KVELISPLPKPPEEKEEPPKEEPPKEEKKYEPPPVVTVVLKVRMHCEACAQVIQKRIRKI 150

Query: 528 DGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPXXXXXXXXXXXXXXXXXX 349
            GVESVETDL N+QV+VKG++DP  +V+ VYK+T+KQA +V                   
Sbjct: 151 KGVESVETDLANDQVIVKGVVDPAKLVDHVYKRTKKQASIVKDGEKKEEEKKEEEKKEEK 210

Query: 348 XXXXXXXXXXXXXXEGDSKTDVKKSEYWPPKYYIEYAYPPEIFSDENPNACTVM 187
                           D+KT++K+SEYWP K YI+YAY PEIFSDENPNAC+VM
Sbjct: 211 EEEKRGEEENKGGE--DNKTEIKRSEYWPSKNYIDYAYDPEIFSDENPNACSVM 262


>ref|XP_003546197.1| PREDICTED: uncharacterized protein LOC100776967 [Glycine max]
          Length = 267

 Score =  233 bits (595), Expect = 7e-59
 Identities = 125/237 (52%), Positives = 154/237 (64%), Gaps = 6/237 (2%)
 Frame = -1

Query: 879 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 700
           IVLKV MHCEACARKV ++L+ FEGVE+V  D K+  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 31  IVLKVDMHCEACARKVAKALKGFEGVEEVTADSKASKVVVKGKAADPIKVCERLQKKSGK 90

Query: 699 KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXPVITLVLKINMHCEACCQVLQKRIRKI 529
           KVE+ISPL                         PV+T+VLK+ MHCEAC QV+QKRIRKI
Sbjct: 91  KVELISPLPKPPEEKKEEIKEEPQPEEKKEEPPPVVTVVLKVRMHCEACAQVIQKRIRKI 150

Query: 528 DGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPXXXXXXXXXXXXXXXXXX 349
            GVESVET L N+QV+VKG++DP  +V+ VYK+T+KQA +V                   
Sbjct: 151 QGVESVETSLGNDQVIVKGVIDPAKLVDYVYKRTKKQASIVKEEEKEKKEEEEKKEEKEK 210

Query: 348 XXXXXXXXXXXXXXEGDSKTDVKKSEYWPPKYYIEYA---YPPEIFSDENPNACTVM 187
                         EGD+KTD+K+SEYWP + Y++Y    Y P+IFSDENPNACTVM
Sbjct: 211 EKKEGEESKGEDAEEGDTKTDIKRSEYWPLRSYVDYVDYPYAPQIFSDENPNACTVM 267


>ref|XP_003529675.1| PREDICTED: uncharacterized protein LOC100796083 [Glycine max]
          Length = 257

 Score =  233 bits (593), Expect = 1e-58
 Identities = 123/234 (52%), Positives = 153/234 (65%), Gaps = 3/234 (1%)
 Frame = -1

Query: 879 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 700
           IVLKV MHCEACARKV ++L+ F+GVE+V  D ++  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 31  IVLKVDMHCEACARKVAKALKGFQGVEEVSADSRTSKVVVKGKAADPIKVCERLQKKSGK 90

Query: 699 KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXPVITLVLKINMHCEACCQVLQKRIRKI 529
           KVE+ISPL                         PV+T+VLK+ MHCE C QV+QKRIRKI
Sbjct: 91  KVELISPLPKPPEEKKEETKEEPPKEEKKDEPPPVVTVVLKVRMHCEPCAQVIQKRIRKI 150

Query: 528 DGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPXXXXXXXXXXXXXXXXXX 349
            GVESVETDL N+QV+VKG++DP  +V+ VYK+T+KQA +V                   
Sbjct: 151 KGVESVETDLANDQVIVKGVVDPAKLVDHVYKRTKKQASIVKDEEKKEEEKKEEEKREEK 210

Query: 348 XXXXXXXXXXXXXXEGDSKTDVKKSEYWPPKYYIEYAYPPEIFSDENPNACTVM 187
                           D+KT++K+SEYWP K YI+YAY PEIFSDENPNAC+VM
Sbjct: 211 EEEKKEGEE-------DNKTEIKRSEYWPSKNYIDYAYDPEIFSDENPNACSVM 257


>gb|AFK43648.1| unknown [Medicago truncatula]
          Length = 270

 Score =  232 bits (592), Expect = 1e-58
 Identities = 122/235 (51%), Positives = 152/235 (64%), Gaps = 4/235 (1%)
 Frame = -1

Query: 879 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 700
           IVLKV MHCEACARKV ++L+ FEGVE+V  D K   V+VKGK ADPIKV +R+QKKSG+
Sbjct: 36  IVLKVDMHCEACARKVAKALKGFEGVEEVTADSKGSKVVVKGKAADPIKVLKRLQKKSGK 95

Query: 699 KVEIISPLXXXXXXXXXXXXXXXXXXXXXXP----VITLVLKINMHCEACCQVLQKRIRK 532
           KVE+ISPL                           V+T+VLKI MHC+AC QV+QKRIRK
Sbjct: 96  KVELISPLPKPQEEKKEEEIKEEPKPEEKKDEPPPVVTIVLKIRMHCDACAQVIQKRIRK 155

Query: 531 IDGVESVETDLMNNQVVVKGILDPTTVVESVYKKTRKQAFVVPXXXXXXXXXXXXXXXXX 352
           I GVESVETDL N+Q +VKG++DPT +V+ V+K+T+KQA +V                  
Sbjct: 156 IKGVESVETDLGNDQAIVKGVIDPTKLVDEVFKRTKKQASIVKKEEKKEEEKKEEEKKEE 215

Query: 351 XXXXXXXXXXXXXXXEGDSKTDVKKSEYWPPKYYIEYAYPPEIFSDENPNACTVM 187
                          E D+KT++K+SEYWP K Y++YAY PEIFSDENPNAC+VM
Sbjct: 216 VKEEEKKESEEENKGEDDNKTEIKRSEYWPSKDYVDYAYAPEIFSDENPNACSVM 270


Top