BLASTX nr result

ID: Coptis21_contig00000067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000067
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|2...   300   7e-79
ref|XP_002300959.1| predicted protein [Populus trichocarpa] gi|2...   296   7e-78
ref|XP_002520296.1| protein binding protein, putative [Ricinus c...   295   2e-77
emb|CBI18956.3| unnamed protein product [Vitis vinifera]              293   8e-77
ref|XP_002285888.1| PREDICTED: BTB/POZ domain-containing protein...   293   8e-77

>ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|222856912|gb|EEE94459.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  300 bits (767), Expect = 7e-79
 Identities = 160/245 (65%), Positives = 187/245 (76%), Gaps = 8/245 (3%)
 Frame = +3

Query: 228 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXXLKAKVSFLKFSSPIDH----RS 395
           M+CISC+E YG  DAGTCK                   LKAKV+FL+F SP+DH    RS
Sbjct: 1   MRCISCKEYYGRCDAGTCKECYEEASETEEELKREIDDLKAKVAFLRFWSPLDHHITYRS 60

Query: 396 SS--CFTDVLLVAS--DGVVNEIGSPSVSVHKTILASRSPVFKAMLENEMVESRSGTIKI 563
           S+  CFTDV+LVAS  DG+     S  V  HK +L SRSPVFKAMLENEM ESRSGTIKI
Sbjct: 61  SAGPCFTDVVLVASSDDGLTGTAPSVPVPAHKAVLVSRSPVFKAMLENEMEESRSGTIKI 120

Query: 564 SEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAF 743
           S+V+YDALR+FV Y YTAE  LDEQMA DLL+LAEKYQVKHLK++CE FL SKLN EN+ 
Sbjct: 121 SDVSYDALRTFVNYFYTAEACLDEQMAYDLLILAEKYQVKHLKAYCEKFLVSKLNWENSV 180

Query: 744 MCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNT 923
           + +AF+ QHNAK++ EA+LSLIT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL+KQ+NT
Sbjct: 181 VSYAFAHQHNAKHMLEAALSLITDNMDKLTKREEYMELVEKDPRLVVEIYEAYLSKQINT 240

Query: 924 AAAKD 938
           AA KD
Sbjct: 241 AAHKD 245


>ref|XP_002300959.1| predicted protein [Populus trichocarpa] gi|222842685|gb|EEE80232.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  296 bits (758), Expect = 7e-78
 Identities = 162/247 (65%), Positives = 190/247 (76%), Gaps = 10/247 (4%)
 Frame = +3

Query: 228 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXXLKAKVSFLKFSSPID----HRS 395
           M+CISC+E Y   DAGTCK                   LKAKV+FL+F SP+D    HRS
Sbjct: 24  MRCISCKEYYSRCDAGTCKECYEEASDTEEELKREIEDLKAKVAFLRFWSPLDLHITHRS 83

Query: 396 SS--CFTDVLLVAS--DGVVNEIGSPSVSV--HKTILASRSPVFKAMLENEMVESRSGTI 557
            +  CFTDV+L+AS  DG    IG+PSV V  HK +L SRSPVFKAMLENEM ESRSGTI
Sbjct: 84  PAGPCFTDVVLIASSDDGF---IGTPSVPVPAHKAVLVSRSPVFKAMLENEMEESRSGTI 140

Query: 558 KISEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAEN 737
           KIS+V+YDALRSFV YLYTAE  LDEQMACDLLVLAEKY+VKHLK++CE FL SKLN +N
Sbjct: 141 KISDVSYDALRSFVNYLYTAEACLDEQMACDLLVLAEKYEVKHLKAYCEKFLVSKLNWDN 200

Query: 738 AFMCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQV 917
           + M +AF+ QHNAK++ E +LSLIT+NMDKLTK++EY ELV++DPRLVV IYEAYL+KQV
Sbjct: 201 SVMSYAFAHQHNAKHMLETALSLITDNMDKLTKRKEYIELVEEDPRLVVEIYEAYLSKQV 260

Query: 918 NTAAAKD 938
           NTAA KD
Sbjct: 261 NTAAHKD 267


>ref|XP_002520296.1| protein binding protein, putative [Ricinus communis]
           gi|223540515|gb|EEF42082.1| protein binding protein,
           putative [Ricinus communis]
          Length = 267

 Score =  295 bits (754), Expect = 2e-77
 Identities = 158/244 (64%), Positives = 184/244 (75%), Gaps = 8/244 (3%)
 Frame = +3

Query: 228 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXXLKAKVSFLKFSSPIDHRSSS-- 401
           M+CISC+EEYG  DAGTCK                   LKAKV+FL+F SP+DH  S+  
Sbjct: 24  MRCISCKEEYGTIDAGTCKECYEEASETEEELKREIEDLKAKVAFLRFWSPLDHHHSNRS 83

Query: 402 ---CFTDVLLVAS--DGVVNEIGSP-SVSVHKTILASRSPVFKAMLENEMVESRSGTIKI 563
              CFTDV+L+AS  DG     GSP  V  HK +L SRSPVFKAMLENEM ES SGTIKI
Sbjct: 84  TGPCFTDVVLIASSDDGPT---GSPVPVPAHKAVLVSRSPVFKAMLENEMEESHSGTIKI 140

Query: 564 SEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAF 743
           S+V+YDALR F+ YLYTAE  LDEQMACDLLVLAEKYQVKHLK++CE FL SKLN  N+ 
Sbjct: 141 SDVSYDALRMFINYLYTAEACLDEQMACDLLVLAEKYQVKHLKAYCEKFLVSKLNWNNSV 200

Query: 744 MCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNT 923
             +AF+  HNAK++ EA+LSLIT+NMDKLTK+EEY+ELV+KDPRLVV IYEAYL+KQVNT
Sbjct: 201 PSYAFAHLHNAKHMTEAALSLITDNMDKLTKREEYKELVEKDPRLVVEIYEAYLSKQVNT 260

Query: 924 AAAK 935
           AA +
Sbjct: 261 AAPR 264


>emb|CBI18956.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  293 bits (749), Expect = 8e-77
 Identities = 154/237 (64%), Positives = 182/237 (76%)
 Frame = +3

Query: 228 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXXLKAKVSFLKFSSPIDHRSSSCF 407
           M+CISCRE+YG  DAGTCK                   LKAKV+FL+ SSP+DH     F
Sbjct: 1   MRCISCREDYGRIDAGTCKECYEEASETEEELKREIEELKAKVAFLRCSSPLDHSHRRSF 60

Query: 408 TDVLLVASDGVVNEIGSPSVSVHKTILASRSPVFKAMLENEMVESRSGTIKISEVTYDAL 587
           +DV+LVAS+       +P V  HK++LASRSPVFKAMLENEM ES SGTIKIS+V+Y+AL
Sbjct: 61  SDVILVASNDDSAASAAP-VPAHKSVLASRSPVFKAMLENEMEESLSGTIKISDVSYEAL 119

Query: 588 RSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAFMCFAFSSQ 767
           R FV YLYTAE  LDE MACDLLVLAEKYQVKHLK++CE F+ SKLN +N+ + FAF+ Q
Sbjct: 120 RCFVNYLYTAEACLDEPMACDLLVLAEKYQVKHLKAYCEKFMVSKLNWDNSVISFAFAHQ 179

Query: 768 HNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNTAAAKD 938
           HNAK L +A+LS+IT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL+KQVNTAA KD
Sbjct: 180 HNAKLLIDAALSVITDNMDKLTKREEYIELVEKDPRLVVEIYEAYLSKQVNTAAHKD 236


>ref|XP_002285888.1| PREDICTED: BTB/POZ domain-containing protein At4g08455-like [Vitis
           vinifera]
          Length = 264

 Score =  293 bits (749), Expect = 8e-77
 Identities = 154/237 (64%), Positives = 182/237 (76%)
 Frame = +3

Query: 228 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXXLKAKVSFLKFSSPIDHRSSSCF 407
           M+CISCRE+YG  DAGTCK                   LKAKV+FL+ SSP+DH     F
Sbjct: 24  MRCISCREDYGRIDAGTCKECYEEASETEEELKREIEELKAKVAFLRCSSPLDHSHRRSF 83

Query: 408 TDVLLVASDGVVNEIGSPSVSVHKTILASRSPVFKAMLENEMVESRSGTIKISEVTYDAL 587
           +DV+LVAS+       +P V  HK++LASRSPVFKAMLENEM ES SGTIKIS+V+Y+AL
Sbjct: 84  SDVILVASNDDSAASAAP-VPAHKSVLASRSPVFKAMLENEMEESLSGTIKISDVSYEAL 142

Query: 588 RSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAFMCFAFSSQ 767
           R FV YLYTAE  LDE MACDLLVLAEKYQVKHLK++CE F+ SKLN +N+ + FAF+ Q
Sbjct: 143 RCFVNYLYTAEACLDEPMACDLLVLAEKYQVKHLKAYCEKFMVSKLNWDNSVISFAFAHQ 202

Query: 768 HNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNTAAAKD 938
           HNAK L +A+LS+IT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL+KQVNTAA KD
Sbjct: 203 HNAKLLIDAALSVITDNMDKLTKREEYIELVEKDPRLVVEIYEAYLSKQVNTAAHKD 259


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