BLASTX nr result

ID: Coptis21_contig00000060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000060
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540344.1| PREDICTED: uncharacterized protein LOC100817...    73   9e-11
gb|AFW90579.1| hypothetical protein [Solanum tuberosum]                72   2e-10
ref|XP_002517995.1| conserved hypothetical protein [Ricinus comm...    70   7e-10
ref|XP_003543357.1| PREDICTED: uncharacterized protein LOC100305...    68   3e-09
ref|XP_003633339.1| PREDICTED: uncharacterized protein LOC100853...    67   6e-09

>ref|XP_003540344.1| PREDICTED: uncharacterized protein LOC100817529 [Glycine max]
          Length = 93

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 14/94 (14%)
 Frame = -2

Query: 646 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHSKLKQ------SGLRSL-GMFGS 488
           MSYL RVWMAA+VAV QGH TD G  K    L S  H++ +       S LR L G+ GS
Sbjct: 1   MSYLNRVWMAATVAVAQGH-TDPG-HKCKTALTSIHHNRSRLFSGGALSDLRPLSGVVGS 58

Query: 487 DFI-------EREDKVKQADESVQRVMYLSCWGQ 407
           D         + E++V+QAD+S+++VMYLSCWGQ
Sbjct: 59  DVAGSVAGSSDVENRVRQADDSLRKVMYLSCWGQ 92


>gb|AFW90579.1| hypothetical protein [Solanum tuberosum]
          Length = 96

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 17/98 (17%)
 Frame = -2

Query: 646 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHSKLKQS----------GLRSL-G 500
           MSYL RVW+A +VAVV  H  D G  KL +G++S  H K + S          GLR + G
Sbjct: 1   MSYLNRVWVATTVAVVNSHA-DHGQ-KLKSGIQSLNHGKKRFSSSVACGADVAGLRPMSG 58

Query: 499 MFGSD---FI---EREDKVKQADESVQRVMYLSCWGQS 404
           M GSD   FI   + E+K KQ DES+++VMYLSCWG S
Sbjct: 59  MLGSDVGGFIGGGKGEEKRKQTDESLRQVMYLSCWGPS 96


>ref|XP_002517995.1| conserved hypothetical protein [Ricinus communis]
           gi|223542977|gb|EEF44513.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 49/93 (52%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
 Frame = -2

Query: 646 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHSKLKQ------SGLRSL-GMFGS 488
           MSYL RV MAASVAVVQGH  DQG     +GLKS Q+ K         S LR L G+FG+
Sbjct: 1   MSYLNRVCMAASVAVVQGH-PDQGW---KSGLKSLQNGKRTLFSGGDVSELRPLSGVFGA 56

Query: 487 DFI------EREDKVKQADESVQRVMYLSCWGQ 407
           D        E +D+ KQ DE+ +RVMYL+CWGQ
Sbjct: 57  DRSGVPGSPEGQDRGKQNDETFRRVMYLNCWGQ 89


>ref|XP_003543357.1| PREDICTED: uncharacterized protein LOC100305837 [Glycine max]
          Length = 93

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 14/94 (14%)
 Frame = -2

Query: 646 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHSKLK------QSGLRSL-GMFGS 488
           MSYL RVWMAA+VAV QGH TD G  K    L S  H++ +       S LR L G+ G 
Sbjct: 1   MSYLNRVWMAATVAVAQGH-TDPG-HKCKTALNSIHHNRSRLFSGGALSDLRPLSGVVGP 58

Query: 487 DF-------IEREDKVKQADESVQRVMYLSCWGQ 407
           D         + +++V QAD+S+++VMY SCWGQ
Sbjct: 59  DVSGAAAGSSDAKNRVSQADDSLRKVMYFSCWGQ 92


>ref|XP_003633339.1| PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera]
          Length = 90

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 11/92 (11%)
 Frame = -2

Query: 646 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHSKLKQSG------LRSLGMFGSD 485
           MSYL RVWMA SVAVV GH  DQG  K  +G + FQ  K + S       +R +   G  
Sbjct: 1   MSYLNRVWMATSVAVVNGHA-DQGC-KWKSGARPFQIGKRRFSSGGDSADIRPVSGAGDP 58

Query: 484 FI-----EREDKVKQADESVQRVMYLSCWGQS 404
            +      RE++  QADES+++VMY +CWGQS
Sbjct: 59  DLGGLVGNREERRTQADESLRQVMYFNCWGQS 90


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