BLASTX nr result
ID: Coptis21_contig00000047
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000047 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26851.3| unnamed protein product [Vitis vinifera] 134 6e-30 ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ... 134 6e-30 emb|CAN82487.1| hypothetical protein VITISV_006803 [Vitis vinifera] 132 2e-29 ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm... 124 6e-27 gb|AFK36453.1| unknown [Lotus japonicus] 122 2e-26 >emb|CBI26851.3| unnamed protein product [Vitis vinifera] Length = 237 Score = 134 bits (338), Expect = 6e-30 Identities = 63/100 (63%), Positives = 81/100 (81%) Frame = +1 Query: 106 VEPAQPHEALVLILSYLNLFELLRMSQVCKSLRDAIDSDILLWLDIVVEPPLNLRINDDN 285 VE PHEAL+L+L+YL LFELL MS+VC+SLRDA+D D+L WLDI+VE PLN+ +D+ Sbjct: 40 VERGPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLNMLFSDEI 99 Query: 286 LLKFTSKAQGRLRSLVLPSCVRITDDGLLRVIQNNPHINK 405 ++K TSKA GRLR+L L SC +ITDDGL +VI+ NP IN+ Sbjct: 100 MIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINR 139 >ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera] Length = 338 Score = 134 bits (338), Expect = 6e-30 Identities = 63/100 (63%), Positives = 81/100 (81%) Frame = +1 Query: 106 VEPAQPHEALVLILSYLNLFELLRMSQVCKSLRDAIDSDILLWLDIVVEPPLNLRINDDN 285 VE PHEAL+L+L+YL LFELL MS+VC+SLRDA+D D+L WLDI+VE PLN+ +D+ Sbjct: 40 VERGPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLNMLFSDEI 99 Query: 286 LLKFTSKAQGRLRSLVLPSCVRITDDGLLRVIQNNPHINK 405 ++K TSKA GRLR+L L SC +ITDDGL +VI+ NP IN+ Sbjct: 100 MIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINR 139 >emb|CAN82487.1| hypothetical protein VITISV_006803 [Vitis vinifera] Length = 269 Score = 132 bits (333), Expect = 2e-29 Identities = 62/100 (62%), Positives = 79/100 (79%) Frame = +1 Query: 106 VEPAQPHEALVLILSYLNLFELLRMSQVCKSLRDAIDSDILLWLDIVVEPPLNLRINDDN 285 VE PHEAL L+L+YL LFELL MS+VC+S RDA+D D+L WLDI+VE PLN+ +D+ Sbjct: 169 VERGPPHEALXLVLAYLPLFELLNMSEVCRSXRDAVDKDVLXWLDIIVEKPLNMLFSDEI 228 Query: 286 LLKFTSKAQGRLRSLVLPSCVRITDDGLLRVIQNNPHINK 405 ++K TSKA GRLR+L L SC +ITDDGL +VI+ NP IN+ Sbjct: 229 MIKLTSKANGRLRTLALMSCXKITDDGLQQVIEKNPXINR 268 >ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis] gi|223532808|gb|EEF34583.1| conserved hypothetical protein [Ricinus communis] Length = 332 Score = 124 bits (312), Expect = 6e-27 Identities = 58/99 (58%), Positives = 79/99 (79%) Frame = +1 Query: 109 EPAQPHEALVLILSYLNLFELLRMSQVCKSLRDAIDSDILLWLDIVVEPPLNLRINDDNL 288 EP PHEAL L+L+YL +FELL MS+VC SLRDA++ D+L WL I+V+ PL+ R++D+ L Sbjct: 41 EPGPPHEALFLVLAYLPVFELLNMSEVCMSLRDAVNRDLLPWLTIIVDRPLSSRLSDEIL 100 Query: 289 LKFTSKAQGRLRSLVLPSCVRITDDGLLRVIQNNPHINK 405 +K SKA RLR+L+L +C +ITDDGL +VI+ NP+INK Sbjct: 101 MKIASKANCRLRTLILRNCTKITDDGLEKVIEKNPYINK 139 >gb|AFK36453.1| unknown [Lotus japonicus] Length = 299 Score = 122 bits (307), Expect = 2e-26 Identities = 56/104 (53%), Positives = 81/104 (77%) Frame = +1 Query: 94 GEELVEPAQPHEALVLILSYLNLFELLRMSQVCKSLRDAIDSDILLWLDIVVEPPLNLRI 273 G+ E PHEAL L+L+YL ++++L MSQVCK+LRDA+++D+L WL+++VE PL+ R+ Sbjct: 18 GQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRL 77 Query: 274 NDDNLLKFTSKAQGRLRSLVLPSCVRITDDGLLRVIQNNPHINK 405 +D+ L+K TSKA GRL++L L +C ITD GL RV++ NP INK Sbjct: 78 SDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINK 121