BLASTX nr result

ID: Coptis21_contig00000040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000040
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31958.3| unnamed protein product [Vitis vinifera]               81   5e-13
ref|XP_002269903.1| PREDICTED: uncharacterized protein LOC100263...    81   5e-13
ref|XP_002324982.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
ref|XP_002333571.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
ref|XP_002514326.1| conserved hypothetical protein [Ricinus comm...    75   2e-11

>emb|CBI31958.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 38/67 (56%), Positives = 50/67 (74%)
 Frame = +3

Query: 12  VEESLHIFWDFVRADKHDGNIILKGLSAPQVKLLDPADTELLMDVQTNLQKKEKKLKDMS 191
           +E+S+H+FWDF+ ADKH     +KGL   QV L  PAD ELLMD+QT L KKEKKLK++ 
Sbjct: 796 IEKSMHVFWDFLHADKH-----VKGLQGNQVDLQSPADVELLMDIQTGLHKKEKKLKELL 850

Query: 192 RSESSII 212
           RS++ I+
Sbjct: 851 RSKNCIV 857


>ref|XP_002269903.1| PREDICTED: uncharacterized protein LOC100263683 [Vitis vinifera]
          Length = 860

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 38/67 (56%), Positives = 50/67 (74%)
 Frame = +3

Query: 12  VEESLHIFWDFVRADKHDGNIILKGLSAPQVKLLDPADTELLMDVQTNLQKKEKKLKDMS 191
           +E+S+H+FWDF+ ADKH     +KGL   QV L  PAD ELLMD+QT L KKEKKLK++ 
Sbjct: 733 IEKSMHVFWDFLHADKH-----VKGLQGNQVDLQSPADVELLMDIQTGLHKKEKKLKELL 787

Query: 192 RSESSII 212
           RS++ I+
Sbjct: 788 RSKNCIV 794


>ref|XP_002324982.1| predicted protein [Populus trichocarpa] gi|222866416|gb|EEF03547.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 39/57 (68%), Positives = 44/57 (77%)
 Frame = +3

Query: 477 GSGGVGHVEAATFLQVVVGFGIVSKFDPEFLRKLVMENLSRRDMPKLASAFGLGEKM 647
           G G VG  EA  FLQ+V+GFG+ S+FD EFLRKLV EN SRRDM KLA+A G GEKM
Sbjct: 241 GGGVVGPAEAVMFLQMVLGFGLKSRFDEEFLRKLVAENASRRDMAKLAAAIGFGEKM 297


>ref|XP_002333571.1| predicted protein [Populus trichocarpa] gi|222837220|gb|EEE75599.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 39/57 (68%), Positives = 44/57 (77%)
 Frame = +3

Query: 477 GSGGVGHVEAATFLQVVVGFGIVSKFDPEFLRKLVMENLSRRDMPKLASAFGLGEKM 647
           G G VG  EA  FLQ+V+GFG+ S+FD EFLRKLV EN SRRDM KLA+A G GEKM
Sbjct: 241 GGGVVGPAEAVMFLQMVLGFGLKSRFDEEFLRKLVAENASRRDMAKLAAAIGFGEKM 297


>ref|XP_002514326.1| conserved hypothetical protein [Ricinus communis]
           gi|223546782|gb|EEF48280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 547

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 40/64 (62%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
 Frame = +3

Query: 474 EGSGG----VGHVEAATFLQVVVGFGIVSKFDPEFLRKLVMENLSRRDMPKLASAFGLGE 641
           EG GG    VG  EA  FLQ+VV FG+ ++FD E+LRKLVMEN +RRDM KLA A G GE
Sbjct: 233 EGGGGSSGVVGPAEAVMFLQMVVVFGLKARFDEEYLRKLVMENATRRDMAKLAVAVGFGE 292

Query: 642 KMRG 653
           KM G
Sbjct: 293 KMEG 296


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