BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000039
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37185.3| unnamed protein product [Vitis vinifera]              477   e-132
ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik...   477   e-132
ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative ...   446   e-122
ref|XP_003553509.1| PREDICTED: pre-mRNA-processing factor 39-lik...   436   e-119
ref|XP_004140574.1| PREDICTED: pre-mRNA-processing factor 39-lik...   435   e-119

>emb|CBI37185.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  477 bits (1228), Expect = e-132
 Identities = 244/330 (73%), Positives = 275/330 (83%), Gaps = 5/330 (1%)
 Frame = +1

Query: 1    ERCLIACANYSEFWIRYVLCMEASGSMDSANDALARATQTFVKRQPEIHLFAAKFREQTG 180
            ERCLIACANY E+WIRYVLCMEASGSMD AN+ALARATQ FVKRQPEIHLFAA+FREQ G
Sbjct: 48   ERCLIACANYPEYWIRYVLCMEASGSMDLANNALARATQVFVKRQPEIHLFAARFREQKG 107

Query: 181  NIAGAREAYQHVHSGISPGLLEAIIKHANMEHRLGNMEDAFSLYDQAIATEKGKEQSQTL 360
            +I G+R AYQ VH+ ISPGLLEAIIKHANMEHRLGN+EDAFSLY+QAIA EKGKE SQTL
Sbjct: 108  DIPGSRAAYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAFSLYEQAIAIEKGKEHSQTL 167

Query: 361  PMLFVQYARFQYLVAGNLEKAREILDEALEHVELSKPFLEALIHLESVHLVPKRINYIDS 540
            PMLF QY+RF YLV GN EKAREIL EALEHV+LSKP LEALIHLES+  +PKRI+++DS
Sbjct: 168  PMLFAQYSRFLYLVTGNTEKAREILVEALEHVQLSKPLLEALIHLESIQSLPKRIDHLDS 227

Query: 541  LVEKFIVPNFDNPNAPSATDREDLSSIYLEFLDLFGDVQTNKKASDRHAKLFLXXXXXXX 720
            LV+KFI  N ++PNA SA +RE+LSSI+LEFLDLFGD Q+ KKA DRHAKLFL       
Sbjct: 228  LVDKFIHTNPESPNAASAAEREELSSIFLEFLDLFGDAQSIKKADDRHAKLFLHHRSTSE 287

Query: 721  XXXXXAEDFLASDKTKVAKSYASVPSAAQAAMGAYPNAQNQW-SAYGVQPQAWMPSPQAQ 897
                 AEDFLASDK K+AKSY+ VPS AQ+ MGAYP+AQNQW S YG+QPQAW  + QAQ
Sbjct: 288  LKKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQAWPQATQAQ 347

Query: 898  GQQY-PGYTQQA---AYGGYNSTYVAPQVP 975
            GQQ+ PGYTQQA   AY GY S+Y  PQ+P
Sbjct: 348  GQQWNPGYTQQAAYNAYSGYGSSYTHPQIP 377


>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
          Length = 832

 Score =  477 bits (1228), Expect = e-132
 Identities = 244/330 (73%), Positives = 275/330 (83%), Gaps = 5/330 (1%)
 Frame = +1

Query: 1    ERCLIACANYSEFWIRYVLCMEASGSMDSANDALARATQTFVKRQPEIHLFAAKFREQTG 180
            ERCLIACANY E+WIRYVLCMEASGSMD AN+ALARATQ FVKRQPEIHLFAA+FREQ G
Sbjct: 448  ERCLIACANYPEYWIRYVLCMEASGSMDLANNALARATQVFVKRQPEIHLFAARFREQKG 507

Query: 181  NIAGAREAYQHVHSGISPGLLEAIIKHANMEHRLGNMEDAFSLYDQAIATEKGKEQSQTL 360
            +I G+R AYQ VH+ ISPGLLEAIIKHANMEHRLGN+EDAFSLY+QAIA EKGKE SQTL
Sbjct: 508  DIPGSRAAYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAFSLYEQAIAIEKGKEHSQTL 567

Query: 361  PMLFVQYARFQYLVAGNLEKAREILDEALEHVELSKPFLEALIHLESVHLVPKRINYIDS 540
            PMLF QY+RF YLV GN EKAREIL EALEHV+LSKP LEALIHLES+  +PKRI+++DS
Sbjct: 568  PMLFAQYSRFLYLVTGNTEKAREILVEALEHVQLSKPLLEALIHLESIQSLPKRIDHLDS 627

Query: 541  LVEKFIVPNFDNPNAPSATDREDLSSIYLEFLDLFGDVQTNKKASDRHAKLFLXXXXXXX 720
            LV+KFI  N ++PNA SA +RE+LSSI+LEFLDLFGD Q+ KKA DRHAKLFL       
Sbjct: 628  LVDKFIHTNPESPNAASAAEREELSSIFLEFLDLFGDAQSIKKADDRHAKLFLHHRSTSE 687

Query: 721  XXXXXAEDFLASDKTKVAKSYASVPSAAQAAMGAYPNAQNQW-SAYGVQPQAWMPSPQAQ 897
                 AEDFLASDK K+AKSY+ VPS AQ+ MGAYP+AQNQW S YG+QPQAW  + QAQ
Sbjct: 688  LKKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQAWPQATQAQ 747

Query: 898  GQQY-PGYTQQA---AYGGYNSTYVAPQVP 975
            GQQ+ PGYTQQA   AY GY S+Y  PQ+P
Sbjct: 748  GQQWNPGYTQQAAYNAYSGYGSSYTHPQIP 777


>ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
            gi|223534107|gb|EEF35824.1| Pre-mRNA-processing protein
            prp39, putative [Ricinus communis]
          Length = 829

 Score =  446 bits (1146), Expect = e-122
 Identities = 221/330 (66%), Positives = 265/330 (80%), Gaps = 5/330 (1%)
 Frame = +1

Query: 1    ERCLIACANYSEFWIRYVLCMEASGSMDSANDALARATQTFVKRQPEIHLFAAKFREQTG 180
            ERCLIACANY E+WIRY LCMEASGSMD A++ALARATQ FVKR+PEIHLFAA+FREQ G
Sbjct: 446  ERCLIACANYPEYWIRYTLCMEASGSMDLASNALARATQVFVKRRPEIHLFAARFREQNG 505

Query: 181  NIAGAREAYQHVHSGISPGLLEAIIKHANMEHRLGNMEDAFSLYDQAIATEKGKEQSQTL 360
            ++ GAR AYQ VH+ I+PGL EA++KHANMEHRLGN++DA SLY+QAIA EKGKE SQ L
Sbjct: 506  DVPGARAAYQLVHTEIAPGLFEAVVKHANMEHRLGNLKDACSLYEQAIAIEKGKEHSQVL 565

Query: 361  PMLFVQYARFQYLVAGNLEKAREILDEALEHVELSKPFLEALIHLESVHLVPKRINYIDS 540
            PML+ QY RF YLV+GN+ KAREIL EALE+V+LSKP LEA IH+ES+  +PKRI+Y+DS
Sbjct: 566  PMLYAQYTRFLYLVSGNINKAREILVEALENVQLSKPLLEAFIHIESIQSLPKRIDYLDS 625

Query: 541  LVEKFIVPNFDNPNAPSATDREDLSSIYLEFLDLFGDVQTNKKASDRHAKLFLXXXXXXX 720
            LV+KF++PN D+ +A SATDRE+LS I+LEFL +FGD Q+ KKA DRHAKLFL       
Sbjct: 626  LVDKFVMPNSDSLSAASATDREELSCIFLEFLGMFGDAQSIKKADDRHAKLFLPHRSKSE 685

Query: 721  XXXXXAEDFLASDKTKVAKSYASVPSAAQAAMGAYPNAQNQWSA-YGVQPQAWMPSPQAQ 897
                 A+D+L SDK+K+AK+Y   PS  Q+ MGAYP+ QNQW+A YGVQPQAW P+ QAQ
Sbjct: 686  FKKRHADDYLTSDKSKIAKAYGDAPSPVQSLMGAYPSTQNQWAAGYGVQPQAWPPATQAQ 745

Query: 898  GQQY-PGYTQQAA---YGGYNSTYVAPQVP 975
             QQ+ PGY QQAA   YG Y S+Y  PQ P
Sbjct: 746  MQQWTPGYGQQAAYSTYGSYASSYTTPQAP 775


>ref|XP_003553509.1| PREDICTED: pre-mRNA-processing factor 39-like [Glycine max]
          Length = 828

 Score =  436 bits (1120), Expect = e-119
 Identities = 225/331 (67%), Positives = 262/331 (79%), Gaps = 6/331 (1%)
 Frame = +1

Query: 1    ERCLIACANYSEFWIRYVLCMEASGSMDSANDALARATQTFVKRQPEIHLFAAKFREQTG 180
            ERC+IACANY E+WIRYVLCMEASGSMD AN+ LARATQ FVKRQPEIHLF A+F+EQTG
Sbjct: 447  ERCVIACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHLFCARFKEQTG 506

Query: 181  NIAGAREAYQHVHSGISPGLLEAIIKHANMEHRLGNMEDAFSLYDQAIATEKGKEQSQTL 360
            +I GAR AYQ VH+  SPGLLEAIIKHANME+RLG MEDAFSLY+ AIA EKGKE SQTL
Sbjct: 507  DIDGARAAYQLVHTETSPGLLEAIIKHANMEYRLGKMEDAFSLYEHAIAIEKGKEHSQTL 566

Query: 361  PMLFVQYARFQYLVAGNLEKAREILDEALEHVELSKPFLEALIHLESVHLVPKR--INYI 534
            PMLF QY+RF YL +GN EKAR+IL E LE+V LSKP LEAL+H E++  +PKR  ++++
Sbjct: 567  PMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEALLHFEAIQPLPKRVGVDFL 626

Query: 535  DSLVEKFIVPNFDNPNAPSATDREDLSSIYLEFLDLFGDVQTNKKASDRHAKLFLXXXXX 714
            +S V KFI+PN ++    S T+RE+LSSI+LEFL+LFGDVQ+ K+A DRHAKLFL     
Sbjct: 627  ESWVVKFIMPNSESAGVASPTEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSM 686

Query: 715  XXXXXXXAEDFLASDKTKVAKSYASVPSAAQAAMGAYPNAQNQWSAYGVQPQAWMPSPQA 894
                   AEDFL SDKTKV +SY S  S AQ+AMGAYPNAQNQW+ YGVQPQ W P  QA
Sbjct: 687  SELKKRHAEDFLVSDKTKVPRSY-SAQSPAQSAMGAYPNAQNQWTNYGVQPQTWPPVTQA 745

Query: 895  QGQQY-PGYTQQAAYG---GYNSTYVAPQVP 975
            QGQQ+  GYTQQA+YG   GY S YV  Q+P
Sbjct: 746  QGQQWTAGYTQQASYGAYAGYGSNYVNSQLP 776


>ref|XP_004140574.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
            gi|449487353|ref|XP_004157584.1| PREDICTED:
            pre-mRNA-processing factor 39-like [Cucumis sativus]
          Length = 831

 Score =  435 bits (1119), Expect = e-119
 Identities = 218/326 (66%), Positives = 262/326 (80%), Gaps = 2/326 (0%)
 Frame = +1

Query: 1    ERCLIACANYSEFWIRYVLCMEASGSMDSANDALARATQTFVKRQPEIHLFAAKFREQTG 180
            ERC+IACANY E+WIRY+LCM+AS SMD AN+ALARA+Q FVKR+PEIHLFAA+F+EQ G
Sbjct: 447  ERCVIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNG 506

Query: 181  NIAGAREAYQHVHSGISPGLLEAIIKHANMEHRLGNMEDAFSLYDQAIATEKGKEQSQTL 360
            +IAGAR +YQ VHS ISPGLLEAIIKHANMEHRLGN+EDA+S+Y+QAIA E+GKE S+ L
Sbjct: 507  DIAGARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRAL 566

Query: 361  PMLFVQYARFQYLVAGNLEKAREILDEALEHVELSKPFLEALIHLESVHLVPKRINYIDS 540
             +L+ QY+RFQ LV  N  KAREILD+A+EH ELSKP +EALIH E++    KRI+Y+DS
Sbjct: 567  SLLYAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTGKRIDYLDS 626

Query: 541  LVEKFIVPNFDNPNAPSATDREDLSSIYLEFLDLFGDVQTNKKASDRHAKLFLXXXXXXX 720
            LVEK IVPN +N    SA+ RE+LSSI+LEFL+LFGDVQ+ KKA DRH KLF+       
Sbjct: 627  LVEKVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISHKSTSE 686

Query: 721  XXXXXAEDFLASDKTKVAKSYASVPSAAQAAMGAYPNAQNQWSA-YGVQPQAWMPSPQAQ 897
                 A+D+LAS+K K+AK+Y SV S AQ+ MG YP +QNQW+A YGVQPQAW P  QAQ
Sbjct: 687  LKKRLADDYLASEKAKMAKTYPSVASPAQSLMGVYPTSQNQWAASYGVQPQAWPPVAQAQ 746

Query: 898  GQQY-PGYTQQAAYGGYNSTYVAPQV 972
            GQQ+ PGYTQ A+Y GY STY  PQV
Sbjct: 747  GQQWAPGYTQSASYSGYGSTYTNPQV 772