BLASTX nr result

ID: Coptis21_contig00000036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000036
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila]      82   4e-14
ref|XP_002308326.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata] gi...    78   8e-13
gb|AAD11808.1| syntaxin-related protein Nt-syr1 [Nicotiana tabacum]    77   1e-12
ref|NP_187788.1| syntaxin-121 [Arabidopsis thaliana] gi|28380149...    77   1e-12

>dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila]
          Length = 342

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 47/107 (43%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
 Frame = -3

Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 144
           MNDLFS SFSRF+             GGVQM     S  G NLDKFFEDVE +K+     
Sbjct: 1   MNDLFSSSFSRFRSEPSPRRDGAGGGGGVQMAHPAGSTGGVNLDKFFEDVESVKEELKEL 60

Query: 143 XXXXXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3
                         KT+HNAK++KDLRSKMD+D+        +IKV+
Sbjct: 61  DRLNETLQSCHEQSKTLHNAKAVKDLRSKMDADVGVALKKAKMIKVK 107


>ref|XP_002308326.1| predicted protein [Populus trichocarpa] gi|222854302|gb|EEE91849.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/102 (44%), Positives = 54/102 (52%)
 Frame = -3

Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQMSAMGANLDKFFEDVEGIKDXXXXXXXXXX 129
           MNDLFSGSFSRF                 Q +  G NLDKFFEDVE IKD          
Sbjct: 1   MNDLFSGSFSRFHSEEASPDHHVIQMSEAQSTGGGVNLDKFFEDVESIKDELKELERLNE 60

Query: 128 XXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3
                    KT+HNA+++KD+RSKMD+D++       LIKVR
Sbjct: 61  NMRSSHEQSKTLHNARAVKDMRSKMDADVALALKRAKLIKVR 102


>ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata]
           gi|297330707|gb|EFH61126.1| SYP121 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 342

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
 Frame = -3

Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 144
           MNDLFS SFSRF+              G+QM     S  G NLDKFFEDVE +K+     
Sbjct: 1   MNDLFSSSFSRFRGEPSPRRDAPGGGDGLQMANPAGSTGGVNLDKFFEDVESVKEELKEL 60

Query: 143 XXXXXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3
                         KT+HNAK++KDLRSKMD D+        +IKV+
Sbjct: 61  DRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVK 107


>gb|AAD11808.1| syntaxin-related protein Nt-syr1 [Nicotiana tabacum]
          Length = 300

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/104 (44%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = -3

Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQMSAM--GANLDKFFEDVEGIKDXXXXXXXX 135
           MNDLFSGSFSRF+               ++M  +  G NLDKFFEDVE IKD        
Sbjct: 1   MNDLFSGSFSRFRADDQSDSH------AIEMGDITGGVNLDKFFEDVEAIKDELKGLEKI 54

Query: 134 XXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3
                      KT+HNAK++KDLRS MD+D+S        IKVR
Sbjct: 55  YSQLQSSHEKSKTLHNAKAVKDLRSNMDNDVSMALKKAKFIKVR 98


>ref|NP_187788.1| syntaxin-121 [Arabidopsis thaliana]
           gi|28380149|sp|Q9ZSD4.1|SY121_ARATH RecName:
           Full=Syntaxin-121; Short=AtSYP121; AltName:
           Full=Syntaxin-related protein At-Syr1
           gi|6671938|gb|AAF23198.1|AC016795_11 putative syntaxin
           [Arabidopsis thaliana] gi|4206789|gb|AAD11809.1|
           syntaxin-related protein At-SYR1 [Arabidopsis thaliana]
           gi|20260504|gb|AAM13150.1| putative syntaxin
           [Arabidopsis thaliana] gi|21593428|gb|AAM65395.1|
           putative syntaxin [Arabidopsis thaliana]
           gi|28059412|gb|AAO30056.1| putative syntaxin
           [Arabidopsis thaliana] gi|332641582|gb|AEE75103.1|
           syntaxin-121 [Arabidopsis thaliana]
          Length = 346

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/108 (43%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
 Frame = -3

Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKG-GVQM-----SAMGANLDKFFEDVEGIKDXXXX 147
           MNDLFS SFSRF+             G GVQM     S  G NLDKFFEDVE +K+    
Sbjct: 1   MNDLFSSSFSRFRSGEPSPRRDVAGGGDGVQMANPAGSTGGVNLDKFFEDVESVKEELKE 60

Query: 146 XXXXXXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3
                          KT+HNAK++KDLRSKMD D+        +IKV+
Sbjct: 61  LDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVK 108


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