BLASTX nr result
ID: Coptis21_contig00000036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000036 (502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila] 82 4e-14 ref|XP_002308326.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-13 ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata] gi... 78 8e-13 gb|AAD11808.1| syntaxin-related protein Nt-syr1 [Nicotiana tabacum] 77 1e-12 ref|NP_187788.1| syntaxin-121 [Arabidopsis thaliana] gi|28380149... 77 1e-12 >dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila] Length = 342 Score = 82.0 bits (201), Expect = 4e-14 Identities = 47/107 (43%), Positives = 57/107 (53%), Gaps = 5/107 (4%) Frame = -3 Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 144 MNDLFS SFSRF+ GGVQM S G NLDKFFEDVE +K+ Sbjct: 1 MNDLFSSSFSRFRSEPSPRRDGAGGGGGVQMAHPAGSTGGVNLDKFFEDVESVKEELKEL 60 Query: 143 XXXXXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3 KT+HNAK++KDLRSKMD+D+ +IKV+ Sbjct: 61 DRLNETLQSCHEQSKTLHNAKAVKDLRSKMDADVGVALKKAKMIKVK 107 >ref|XP_002308326.1| predicted protein [Populus trichocarpa] gi|222854302|gb|EEE91849.1| predicted protein [Populus trichocarpa] Length = 306 Score = 80.9 bits (198), Expect = 1e-13 Identities = 45/102 (44%), Positives = 54/102 (52%) Frame = -3 Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQMSAMGANLDKFFEDVEGIKDXXXXXXXXXX 129 MNDLFSGSFSRF Q + G NLDKFFEDVE IKD Sbjct: 1 MNDLFSGSFSRFHSEEASPDHHVIQMSEAQSTGGGVNLDKFFEDVESIKDELKELERLNE 60 Query: 128 XXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3 KT+HNA+++KD+RSKMD+D++ LIKVR Sbjct: 61 NMRSSHEQSKTLHNARAVKDMRSKMDADVALALKRAKLIKVR 102 >ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata] gi|297330707|gb|EFH61126.1| SYP121 [Arabidopsis lyrata subsp. lyrata] Length = 342 Score = 77.8 bits (190), Expect = 8e-13 Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 5/107 (4%) Frame = -3 Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 144 MNDLFS SFSRF+ G+QM S G NLDKFFEDVE +K+ Sbjct: 1 MNDLFSSSFSRFRGEPSPRRDAPGGGDGLQMANPAGSTGGVNLDKFFEDVESVKEELKEL 60 Query: 143 XXXXXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3 KT+HNAK++KDLRSKMD D+ +IKV+ Sbjct: 61 DRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVK 107 >gb|AAD11808.1| syntaxin-related protein Nt-syr1 [Nicotiana tabacum] Length = 300 Score = 77.0 bits (188), Expect = 1e-12 Identities = 46/104 (44%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Frame = -3 Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKGGVQMSAM--GANLDKFFEDVEGIKDXXXXXXXX 135 MNDLFSGSFSRF+ ++M + G NLDKFFEDVE IKD Sbjct: 1 MNDLFSGSFSRFRADDQSDSH------AIEMGDITGGVNLDKFFEDVEAIKDELKGLEKI 54 Query: 134 XXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3 KT+HNAK++KDLRS MD+D+S IKVR Sbjct: 55 YSQLQSSHEKSKTLHNAKAVKDLRSNMDNDVSMALKKAKFIKVR 98 >ref|NP_187788.1| syntaxin-121 [Arabidopsis thaliana] gi|28380149|sp|Q9ZSD4.1|SY121_ARATH RecName: Full=Syntaxin-121; Short=AtSYP121; AltName: Full=Syntaxin-related protein At-Syr1 gi|6671938|gb|AAF23198.1|AC016795_11 putative syntaxin [Arabidopsis thaliana] gi|4206789|gb|AAD11809.1| syntaxin-related protein At-SYR1 [Arabidopsis thaliana] gi|20260504|gb|AAM13150.1| putative syntaxin [Arabidopsis thaliana] gi|21593428|gb|AAM65395.1| putative syntaxin [Arabidopsis thaliana] gi|28059412|gb|AAO30056.1| putative syntaxin [Arabidopsis thaliana] gi|332641582|gb|AEE75103.1| syntaxin-121 [Arabidopsis thaliana] Length = 346 Score = 77.0 bits (188), Expect = 1e-12 Identities = 47/108 (43%), Positives = 56/108 (51%), Gaps = 6/108 (5%) Frame = -3 Query: 308 MNDLFSGSFSRFKXXXXXXXXXXXPKG-GVQM-----SAMGANLDKFFEDVEGIKDXXXX 147 MNDLFS SFSRF+ G GVQM S G NLDKFFEDVE +K+ Sbjct: 1 MNDLFSSSFSRFRSGEPSPRRDVAGGGDGVQMANPAGSTGGVNLDKFFEDVESVKEELKE 60 Query: 146 XXXXXXXXXXXXXXLKTIHNAKSIKDLRSKMDSDISXXXXXXXLIKVR 3 KT+HNAK++KDLRSKMD D+ +IKV+ Sbjct: 61 LDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVK 108