BLASTX nr result

ID: Coptis21_contig00000033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000033
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307264.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-33
ref|XP_002310141.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
ref|XP_002523579.1| conserved hypothetical protein [Ricinus comm...   139   7e-31
ref|XP_004141915.1| PREDICTED: uncharacterized protein LOC101216...   133   7e-29
ref|XP_002282456.1| PREDICTED: uncharacterized protein LOC100250...   131   3e-28

>ref|XP_002307264.1| predicted protein [Populus trichocarpa] gi|222856713|gb|EEE94260.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  148 bits (373), Expect = 2e-33
 Identities = 81/168 (48%), Positives = 96/168 (57%), Gaps = 5/168 (2%)
 Frame = +1

Query: 124 PLTGSEVYFKPMSESQRAQP-----PLYKQHSLSSDTYRDEAWLXXXXXXXXXXXXXVTD 288
           P    ++ ++P    Q  Q      PLYKQHS S D YRDEAWL             VTD
Sbjct: 11  PPREEQIEYQPPIRKQHQQQLLGPSPLYKQHSWSPDIYRDEAWLRRKGNYKKKKCKSVTD 70

Query: 289 DDLDELKACMELGFGFDSPDLDRKLSDTIPALEFYFAVNKQYNNXXXXXXXXXXXXXXXX 468
           +DLDELK C+ELGFGFDSP++D++LSDT PALE Y+AVNK Y++                
Sbjct: 71  EDLDELKGCIELGFGFDSPEMDQRLSDTFPALELYYAVNKNYHDHSVSKPFTDTSSSSMA 130

Query: 469 XXXXXXXXXXXXLDSPNTIFDTGNNPQLVKARLKQWAQVVACSVRHSS 612
                       L SP+ IF  G+NPQ VK RLKQWAQVVACSVR SS
Sbjct: 131 SDCDSLSP----LGSPHNIFGPGDNPQTVKTRLKQWAQVVACSVRQSS 174


>ref|XP_002310141.1| predicted protein [Populus trichocarpa] gi|222853044|gb|EEE90591.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  142 bits (358), Expect = 1e-31
 Identities = 76/143 (53%), Positives = 86/143 (60%)
 Frame = +1

Query: 184 PLYKQHSLSSDTYRDEAWLXXXXXXXXXXXXXVTDDDLDELKACMELGFGFDSPDLDRKL 363
           PLYKQHS S D  RDEAWL             VTD+DLDELK C+ELGFGFDSP++D++L
Sbjct: 41  PLYKQHSWSPDIDRDEAWLRRKGSYKKKKSKSVTDEDLDELKGCIELGFGFDSPEMDQRL 100

Query: 364 SDTIPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTIFDTGNN 543
           SDT PALE Y+AVNK Y +                            L SP+TIF  G N
Sbjct: 101 SDTFPALELYYAVNKNYYDHSASKPVVTATPSSSTASDCDSPSP---LGSPHTIFGPGEN 157

Query: 544 PQLVKARLKQWAQVVACSVRHSS 612
           PQ VK RL+QWAQVVACSVR SS
Sbjct: 158 PQTVKTRLRQWAQVVACSVRQSS 180


>ref|XP_002523579.1| conserved hypothetical protein [Ricinus communis]
           gi|223537141|gb|EEF38774.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score =  139 bits (351), Expect = 7e-31
 Identities = 74/143 (51%), Positives = 86/143 (60%)
 Frame = +1

Query: 184 PLYKQHSLSSDTYRDEAWLXXXXXXXXXXXXXVTDDDLDELKACMELGFGFDSPDLDRKL 363
           PLYKQHS S D YRDEAWL             VTD+D+DELKAC+ELGFGFDSP++D++L
Sbjct: 158 PLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACIELGFGFDSPEMDQRL 217

Query: 364 SDTIPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTIFDTGNN 543
           SDT+PAL  Y AVNK Y +                            L SP+ IF  G+N
Sbjct: 218 SDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSP----LGSPHAIFGPGDN 273

Query: 544 PQLVKARLKQWAQVVACSVRHSS 612
           PQ VK RL+QWAQVVACSVR  S
Sbjct: 274 PQTVKTRLRQWAQVVACSVRQCS 296


>ref|XP_004141915.1| PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus]
           gi|449512907|ref|XP_004164175.1| PREDICTED:
           uncharacterized LOC101216565 [Cucumis sativus]
          Length = 154

 Score =  133 bits (334), Expect = 7e-29
 Identities = 72/140 (51%), Positives = 81/140 (57%)
 Frame = +1

Query: 184 PLYKQHSLSSDTYRDEAWLXXXXXXXXXXXXXVTDDDLDELKACMELGFGFDSPDLDRKL 363
           PLYKQHS S D  RD+AWL             VTDDDL+ELKAC+ELGFGF+SP++D +L
Sbjct: 19  PLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELKACLELGFGFNSPEVDPRL 78

Query: 364 SDTIPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTIFDTGNN 543
            +T PAL FY AVNKQYN                               SP  I   G N
Sbjct: 79  CETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD------SSPAAIISHGEN 132

Query: 544 PQLVKARLKQWAQVVACSVR 603
           PQ+VKARLKQWAQVVACSVR
Sbjct: 133 PQMVKARLKQWAQVVACSVR 152


>ref|XP_002282456.1| PREDICTED: uncharacterized protein LOC100250717 [Vitis vinifera]
          Length = 157

 Score =  131 bits (329), Expect = 3e-28
 Identities = 77/149 (51%), Positives = 86/149 (57%), Gaps = 6/149 (4%)
 Frame = +1

Query: 184 PLYKQHSLSSD---TYRDEAWLXXXXXXXXXXXXX---VTDDDLDELKACMELGFGFDSP 345
           PLYKQ S S D   TYRDEAW                 VTD+DLDELKAC+ELGFGFDSP
Sbjct: 15  PLYKQRSWSPDSPDTYRDEAWQRRKGNNTRRSRRRSKSVTDEDLDELKACIELGFGFDSP 74

Query: 346 DLDRKLSDTIPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTI 525
           D+D++LSDT+PAL  Y AVNKQY                              L SP+TI
Sbjct: 75  DMDQRLSDTLPALGLYKAVNKQY-------FDTVAKSLSPSSSTMSECDPPSPLGSPHTI 127

Query: 526 FDTGNNPQLVKARLKQWAQVVACSVRHSS 612
           F  G+NPQ VK RL+ WAQVVACSVR SS
Sbjct: 128 FGPGDNPQTVKTRLRHWAQVVACSVRQSS 156


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