BLASTX nr result

ID: Coptis21_contig00000012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000012
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21547.3| unnamed protein product [Vitis vinifera]              551   e-154
ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulat...   551   e-154
gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis]       551   e-154
ref|XP_002310051.1| predicted protein [Populus trichocarpa] gi|2...   550   e-154
ref|XP_003525095.1| PREDICTED: 26S proteasome non-ATPase regulat...   549   e-154

>emb|CBI21547.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  551 bits (1419), Expect = e-154
 Identities = 278/345 (80%), Positives = 303/345 (87%)
 Frame = +1

Query: 1    EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRXXXXXXXXXXXXX 180
            EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS              
Sbjct: 146  EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS-------------- 191

Query: 181  XXXXXXXXXXXAQILSRKISPRVFDADTSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY 360
                            RKISPRVFDAD+SKEKKKPKEGD+VVEEAPADIPSL ELKRIYY
Sbjct: 192  ----------------RKISPRVFDADSSKEKKKPKEGDSVVEEAPADIPSLPELKRIYY 235

Query: 361  ELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPSKWVPVLRKICWYLVLAPHDPMQSSLL 540
            ELMIRY+SH+NDYLEICR YKAIY+I SV+EDP++W+PVLRKICWYLVL+PHDPMQSSLL
Sbjct: 236  ELMIRYHSHSNDYLEICRSYKAIYEIPSVREDPAQWIPVLRKICWYLVLSPHDPMQSSLL 295

Query: 541  NSTLEDKNLSEIPNFGDLLKQLVTMEVIQWTVLWETCRNEFENEKNMLGGSLGDKAAEDL 720
            NSTLEDKNLSEIPNF  LLKQLVTMEVIQW  LW   ++EFENEKNMLGGSLGDKAAEDL
Sbjct: 296  NSTLEDKNLSEIPNFRLLLKQLVTMEVIQWISLWNMFKDEFENEKNMLGGSLGDKAAEDL 355

Query: 721  RQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSDMVVSKSLVAKVDRPMGTVC 900
            RQRIIEHNILVVSKYY+R+TL+RLA+LLCL+++E EKHLSDMVVSKSLVAK+DRPMG VC
Sbjct: 356  RQRIIEHNILVVSKYYSRITLKRLAELLCLSVQEAEKHLSDMVVSKSLVAKIDRPMGVVC 415

Query: 901  FQTSKDSNEVLNSWAMNLEKLLDLVEKSCHQIHKETMIHKAALKV 1035
            FQT+KDSN++LNSW+MNLEKLLDLVEKSCHQIHKETM+HKAALKV
Sbjct: 416  FQTAKDSNDILNSWSMNLEKLLDLVEKSCHQIHKETMVHKAALKV 460


>ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 12-like
            [Vitis vinifera]
          Length = 442

 Score =  551 bits (1419), Expect = e-154
 Identities = 278/345 (80%), Positives = 303/345 (87%)
 Frame = +1

Query: 1    EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRXXXXXXXXXXXXX 180
            EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS              
Sbjct: 128  EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS-------------- 173

Query: 181  XXXXXXXXXXXAQILSRKISPRVFDADTSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY 360
                            RKISPRVFDAD+SKEKKKPKEGD+VVEEAPADIPSL ELKRIYY
Sbjct: 174  ----------------RKISPRVFDADSSKEKKKPKEGDSVVEEAPADIPSLPELKRIYY 217

Query: 361  ELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPSKWVPVLRKICWYLVLAPHDPMQSSLL 540
            ELMIRY+SH+NDYLEICR YKAIY+I SV+EDP++W+PVLRKICWYLVL+PHDPMQSSLL
Sbjct: 218  ELMIRYHSHSNDYLEICRSYKAIYEIPSVREDPAQWIPVLRKICWYLVLSPHDPMQSSLL 277

Query: 541  NSTLEDKNLSEIPNFGDLLKQLVTMEVIQWTVLWETCRNEFENEKNMLGGSLGDKAAEDL 720
            NSTLEDKNLSEIPNF  LLKQLVTMEVIQW  LW   ++EFENEKNMLGGSLGDKAAEDL
Sbjct: 278  NSTLEDKNLSEIPNFRLLLKQLVTMEVIQWISLWNMFKDEFENEKNMLGGSLGDKAAEDL 337

Query: 721  RQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSDMVVSKSLVAKVDRPMGTVC 900
            RQRIIEHNILVVSKYY+R+TL+RLA+LLCL+++E EKHLSDMVVSKSLVAK+DRPMG VC
Sbjct: 338  RQRIIEHNILVVSKYYSRITLKRLAELLCLSVQEAEKHLSDMVVSKSLVAKIDRPMGVVC 397

Query: 901  FQTSKDSNEVLNSWAMNLEKLLDLVEKSCHQIHKETMIHKAALKV 1035
            FQT+KDSN++LNSW+MNLEKLLDLVEKSCHQIHKETM+HKAALKV
Sbjct: 398  FQTAKDSNDILNSWSMNLEKLLDLVEKSCHQIHKETMVHKAALKV 442


>gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis]
          Length = 440

 Score =  551 bits (1419), Expect = e-154
 Identities = 280/344 (81%), Positives = 300/344 (87%)
 Frame = +1

Query: 1    EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRXXXXXXXXXXXXX 180
            EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS              
Sbjct: 126  EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS-------------- 171

Query: 181  XXXXXXXXXXXAQILSRKISPRVFDADTSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY 360
                            RKISPRVFDAD SKEKKKPKEGDNVVEEAPADIPSLLELKRIYY
Sbjct: 172  ----------------RKISPRVFDADPSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY 215

Query: 361  ELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPSKWVPVLRKICWYLVLAPHDPMQSSLL 540
            ELMIRY+SHNNDYLEICR YKAIYDI SVKEDP++W+PVLRKICWYLVL+PHDPMQSSLL
Sbjct: 216  ELMIRYHSHNNDYLEICRSYKAIYDIPSVKEDPAQWIPVLRKICWYLVLSPHDPMQSSLL 275

Query: 541  NSTLEDKNLSEIPNFGDLLKQLVTMEVIQWTVLWETCRNEFENEKNMLGGSLGDKAAEDL 720
            NSTLEDKNLSEIPNF  LLKQLVTMEVIQWT LWE  ++EFENEK+MLGGSLG KAAEDL
Sbjct: 276  NSTLEDKNLSEIPNFRLLLKQLVTMEVIQWTGLWEMYKDEFENEKSMLGGSLGAKAAEDL 335

Query: 721  RQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSDMVVSKSLVAKVDRPMGTVC 900
            + RIIEHNILVVSKYY+R+TL+RLA LLCL+++E EKHLSDMVVSKSLVAK+DRPMG VC
Sbjct: 336  KLRIIEHNILVVSKYYSRITLKRLADLLCLSLQEAEKHLSDMVVSKSLVAKIDRPMGIVC 395

Query: 901  FQTSKDSNEVLNSWAMNLEKLLDLVEKSCHQIHKETMIHKAALK 1032
            FQT+KDSN++LNSWAMNLEKLLDLVEKSCHQIHKETM+HKA LK
Sbjct: 396  FQTAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVHKAVLK 439


>ref|XP_002310051.1| predicted protein [Populus trichocarpa] gi|222852954|gb|EEE90501.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  550 bits (1417), Expect = e-154
 Identities = 278/345 (80%), Positives = 301/345 (87%)
 Frame = +1

Query: 1    EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRXXXXXXXXXXXXX 180
            EAADLMQE+AVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS              
Sbjct: 128  EAADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS-------------- 173

Query: 181  XXXXXXXXXXXAQILSRKISPRVFDADTSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY 360
                            RKISPRVFDADTSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY
Sbjct: 174  ----------------RKISPRVFDADTSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY 217

Query: 361  ELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPSKWVPVLRKICWYLVLAPHDPMQSSLL 540
            ELMIRYYSH+NDYLEICRCYKAIY+I  VKE+P++W+PVLRKICWYLVLAPHDPMQSSLL
Sbjct: 218  ELMIRYYSHDNDYLEICRCYKAIYEIPPVKENPAQWIPVLRKICWYLVLAPHDPMQSSLL 277

Query: 541  NSTLEDKNLSEIPNFGDLLKQLVTMEVIQWTVLWETCRNEFENEKNMLGGSLGDKAAEDL 720
            NSTLEDKNLSEI NF  LLKQLVTMEVIQWT LW    +EFENEKN+LGGSLGDKAAEDL
Sbjct: 278  NSTLEDKNLSEISNFKLLLKQLVTMEVIQWTSLWNAFMDEFENEKNLLGGSLGDKAAEDL 337

Query: 721  RQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSDMVVSKSLVAKVDRPMGTVC 900
            +QRIIEHNILVVSKYY+R+T++RLA+LLCL+I+E EKHLSDMVVSK+LVAK+DRPMG V 
Sbjct: 338  KQRIIEHNILVVSKYYSRITVKRLAELLCLSIQEAEKHLSDMVVSKALVAKIDRPMGIVS 397

Query: 901  FQTSKDSNEVLNSWAMNLEKLLDLVEKSCHQIHKETMIHKAALKV 1035
            FQ +KDSN++LNSWAMNLEKLLDLVEKSCHQIHKETM+HKAALKV
Sbjct: 398  FQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVHKAALKV 442


>ref|XP_003525095.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 12-like
            [Glycine max]
          Length = 441

 Score =  549 bits (1414), Expect = e-154
 Identities = 279/345 (80%), Positives = 302/345 (87%)
 Frame = +1

Query: 1    EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRXXXXXXXXXXXXX 180
            EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS              
Sbjct: 128  EAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILS-------------- 173

Query: 181  XXXXXXXXXXXAQILSRKISPRVFDADTSKEKKKPKEGDNVVEEAPADIPSLLELKRIYY 360
                            RKISPRVFDAD SKEKKKPKEGDNVVEEAPADIPSLLELK+IYY
Sbjct: 174  ----------------RKISPRVFDADLSKEKKKPKEGDNVVEEAPADIPSLLELKQIYY 217

Query: 361  ELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPSKWVPVLRKICWYLVLAPHDPMQSSLL 540
            ELMIRYYSHNNDYLEICRCYKAIY+I SVKEDP+KW+P+LRKICWYLVLAP+DPMQSSLL
Sbjct: 218  ELMIRYYSHNNDYLEICRCYKAIYEIPSVKEDPAKWIPILRKICWYLVLAPYDPMQSSLL 277

Query: 541  NSTLEDKNLSEIPNFGDLLKQLVTMEVIQWTVLWETCRNEFENEKNMLGGSLGDKAAEDL 720
            NSTLEDKN+SEIPNF  LLKQLVTMEVIQWT LW+T +++FENEK   G SLG+KAAEDL
Sbjct: 278  NSTLEDKNISEIPNFKLLLKQLVTMEVIQWTTLWDTYKSDFENEK-ASGKSLGEKAAEDL 336

Query: 721  RQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSDMVVSKSLVAKVDRPMGTVC 900
            RQRIIEHNILVVSKYYAR+TL+RLA+LLCL+I++ EKHLSDMVVSK+LVAK+DRPMG VC
Sbjct: 337  RQRIIEHNILVVSKYYARITLKRLAELLCLSIQDAEKHLSDMVVSKALVAKIDRPMGIVC 396

Query: 901  FQTSKDSNEVLNSWAMNLEKLLDLVEKSCHQIHKETMIHKAALKV 1035
            FQT+KDSNE+LNSWA NLEKLLDLVEKSCHQIHKETM+HKAALKV
Sbjct: 397  FQTAKDSNEILNSWAANLEKLLDLVEKSCHQIHKETMVHKAALKV 441


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