BLASTX nr result
ID: Coptis21_contig00000009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000009
(2112 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa] ... 502 0.0
ref|XP_003522731.1| PREDICTED: tubulin alpha-1 chain-like [Glyci... 502 0.0
sp|P46259.1|TBA1_PEA RecName: Full=Tubulin alpha-1 chain gi|5253... 502 0.0
ref|XP_003603670.1| Tubulin alpha-7 chain [Medicago truncatula] ... 502 0.0
sp|Q6VAF9.1|TBA4_GOSHI RecName: Full=Tubulin alpha-4 chain; AltN... 502 0.0
>ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa]
gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus
tremuloides] gi|118488366|gb|ABK96001.1| unknown [Populus
trichocarpa] gi|222842854|gb|EEE80401.1| tubulin alpha-1
chain [Populus trichocarpa]
Length = 451
Score = 502 bits (1293), Expect(3) = 0.0
Identities = 247/248 (99%), Positives = 248/248 (100%)
Frame = +1
Query: 838 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 1017
PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR
Sbjct: 184 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 243
Query: 1018 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 1197
FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 303
Query: 1198 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 1377
KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 1378 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 1557
PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 1558 DLAALEKD 1581
DLAALEKD
Sbjct: 424 DLAALEKD 431
Score = 161 bits (408), Expect(3) = 0.0
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +1
Query: 322 AIFVDLEPTVIDEVRSGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 501
AIFVDLEPTVIDEVR+GAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK
Sbjct: 65 AIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 502 LADNCTGLQGFLVFNAVGG 558
LADNCTGLQGFLVFNAVGG
Sbjct: 125 LADNCTGLQGFLVFNAVGG 143
Score = 62.4 bits (150), Expect(3) = 0.0
Identities = 32/49 (65%), Positives = 32/49 (65%)
Frame = +2
Query: 617 FNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYN 763
FNAV VDYGKKSKLGFTVYPSPQVSTSVVEPYN
Sbjct: 138 FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYN 186
Score = 89.7 bits (221), Expect = 3e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 72 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 188
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>ref|XP_003522731.1| PREDICTED: tubulin alpha-1 chain-like [Glycine max]
Length = 452
Score = 502 bits (1293), Expect(3) = 0.0
Identities = 247/248 (99%), Positives = 248/248 (100%)
Frame = +1
Query: 838 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 1017
PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR
Sbjct: 184 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 243
Query: 1018 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 1197
FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 303
Query: 1198 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 1377
KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 1378 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 1557
PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 1558 DLAALEKD 1581
DLAALEKD
Sbjct: 424 DLAALEKD 431
Score = 161 bits (407), Expect(3) = 0.0
Identities = 77/79 (97%), Positives = 79/79 (100%)
Frame = +1
Query: 322 AIFVDLEPTVIDEVRSGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 501
A+FVDLEPTVIDEVR+GAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 502 LADNCTGLQGFLVFNAVGG 558
LADNCTGLQGFLVFNAVGG
Sbjct: 125 LADNCTGLQGFLVFNAVGG 143
Score = 62.4 bits (150), Expect(3) = 0.0
Identities = 32/49 (65%), Positives = 32/49 (65%)
Frame = +2
Query: 617 FNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYN 763
FNAV VDYGKKSKLGFTVYPSPQVSTSVVEPYN
Sbjct: 138 FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYN 186
Score = 89.7 bits (221), Expect = 3e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 72 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 188
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>sp|P46259.1|TBA1_PEA RecName: Full=Tubulin alpha-1 chain gi|525332|gb|AAA79910.1|
alpha-tubulin [Pisum sativum]
Length = 452
Score = 502 bits (1293), Expect(3) = 0.0
Identities = 247/248 (99%), Positives = 248/248 (100%)
Frame = +1
Query: 838 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 1017
PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR
Sbjct: 184 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 243
Query: 1018 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 1197
FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 303
Query: 1198 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 1377
KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 1378 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 1557
PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 1558 DLAALEKD 1581
DLAALEKD
Sbjct: 424 DLAALEKD 431
Score = 161 bits (407), Expect(3) = 0.0
Identities = 77/79 (97%), Positives = 79/79 (100%)
Frame = +1
Query: 322 AIFVDLEPTVIDEVRSGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 501
A+FVDLEPTVIDEVR+GAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 502 LADNCTGLQGFLVFNAVGG 558
LADNCTGLQGFLVFNAVGG
Sbjct: 125 LADNCTGLQGFLVFNAVGG 143
Score = 62.4 bits (150), Expect(3) = 0.0
Identities = 32/49 (65%), Positives = 32/49 (65%)
Frame = +2
Query: 617 FNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYN 763
FNAV VDYGKKSKLGFTVYPSPQVSTSVVEPYN
Sbjct: 138 FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYN 186
Score = 88.2 bits (217), Expect = 8e-15
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +3
Query: 72 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 188
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>ref|XP_003603670.1| Tubulin alpha-7 chain [Medicago truncatula]
gi|355492718|gb|AES73921.1| Tubulin alpha-7 chain
[Medicago truncatula]
Length = 451
Score = 502 bits (1293), Expect(3) = 0.0
Identities = 247/248 (99%), Positives = 248/248 (100%)
Frame = +1
Query: 838 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 1017
PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR
Sbjct: 184 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 243
Query: 1018 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 1197
FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 303
Query: 1198 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 1377
KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 1378 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 1557
PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 1558 DLAALEKD 1581
DLAALEKD
Sbjct: 424 DLAALEKD 431
Score = 161 bits (407), Expect(3) = 0.0
Identities = 77/79 (97%), Positives = 79/79 (100%)
Frame = +1
Query: 322 AIFVDLEPTVIDEVRSGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 501
A+FVDLEPTVIDEVR+GAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 502 LADNCTGLQGFLVFNAVGG 558
LADNCTGLQGFLVFNAVGG
Sbjct: 125 LADNCTGLQGFLVFNAVGG 143
Score = 62.4 bits (150), Expect(3) = 0.0
Identities = 32/49 (65%), Positives = 32/49 (65%)
Frame = +2
Query: 617 FNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYN 763
FNAV VDYGKKSKLGFTVYPSPQVSTSVVEPYN
Sbjct: 138 FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYN 186
Score = 88.2 bits (217), Expect = 8e-15
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +3
Query: 72 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 188
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>sp|Q6VAF9.1|TBA4_GOSHI RecName: Full=Tubulin alpha-4 chain; AltName: Full=Alpha-4-tubulin
gi|37529490|gb|AAQ92663.1| alpha-tubulin 4 [Gossypium
hirsutum]
Length = 450
Score = 502 bits (1293), Expect(3) = 0.0
Identities = 247/248 (99%), Positives = 248/248 (100%)
Frame = +1
Query: 838 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 1017
PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR
Sbjct: 184 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLR 243
Query: 1018 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 1197
FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 303
Query: 1198 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 1377
KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 1378 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 1557
PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYTKRAFVHWYVGEGMEEGEFSEARE 423
Query: 1558 DLAALEKD 1581
DLAALEKD
Sbjct: 424 DLAALEKD 431
Score = 161 bits (407), Expect(3) = 0.0
Identities = 77/79 (97%), Positives = 79/79 (100%)
Frame = +1
Query: 322 AIFVDLEPTVIDEVRSGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 501
A+FVDLEPTVIDEVR+GAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 502 LADNCTGLQGFLVFNAVGG 558
LADNCTGLQGFLVFNAVGG
Sbjct: 125 LADNCTGLQGFLVFNAVGG 143
Score = 62.4 bits (150), Expect(3) = 0.0
Identities = 32/49 (65%), Positives = 32/49 (65%)
Frame = +2
Query: 617 FNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYN 763
FNAV VDYGKKSKLGFTVYPSPQVSTSVVEPYN
Sbjct: 138 FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYN 186
Score = 89.7 bits (221), Expect = 3e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 72 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 188
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39