BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00062052
         (271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]    68   2e-09
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
emb|CBI28421.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = +2

Query: 14  DMVNLFKNLSLVHLQKLRSLLGSHHFRRFSSKPNSSREF----HRNDFSNLVSKVCDILR 181
           +MVN  K+  LVHLQ   S+LG   F  FSSKP+ S  F     R  F  +VS+VC IL 
Sbjct: 42  EMVNHLKSPCLVHLQNHSSVLG---FLNFSSKPHISSHFAVPASREPFQAIVSRVCAILS 98

Query: 182 DPQWARSSKLINLSPQLTPLEVARILEIHK 271
             QW  SS+L  LSPQL    VA I+ +HK
Sbjct: 99  RVQWKGSSELKQLSPQLKAHHVAEIVAVHK 128


>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
 Frame = +2

Query: 17  MVNLFKNLSLVHLQKLRSLLGSHHFRRFSSKPNSSREF----HRNDFSNLVSKVCDILRD 184
           MVN  K+  LVHLQ   S+LG   F  FSSKP+ S  F     R  F  +VS+VC IL  
Sbjct: 1   MVNHLKSPCLVHLQNHSSVLG---FLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSR 57

Query: 185 PQWARSSKLINLSPQLTPLEVARILEIHK 271
            QW  SS+L  LSPQL    VA I+ +HK
Sbjct: 58  VQWKGSSELKQLSPQLKAHHVAEIVAVHK 86


>emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
 Frame = +2

Query: 17  MVNLFKNLSLVHLQKLRSLLGSHHFRRFSSKPNSSREF----HRNDFSNLVSKVCDILRD 184
           MVN  K+  LVHLQ   S+LG   F  FSSKP+ S  F     R  F  +VS+VC IL  
Sbjct: 1   MVNHLKSPCLVHLQNHSSVLG---FLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSR 57

Query: 185 PQWARSSKLINLSPQLTPLEVARILEIHK 271
            QW  SS+L  LSPQL    VA I+ +HK
Sbjct: 58  VQWKGSSELKQLSPQLKAHHVAEIVAVHK 86


>ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Fragaria vesca subsp. vesca]
          Length = 927

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
 Frame = +2

Query: 17  MVNLFKNLSLVHLQKLRSLLGSHHFRRFSSKPNSSREFHR---NDFSNLVSKVCDILRDP 187
           M+N  K  +L+HL+ L+SLLG HHF +F S+            N   NLVS+VCDIL DP
Sbjct: 1   MLNPIKTPTLLHLRTLQSLLGPHHFPKFPSRTKLFTHLCHSSPNPSPNLVSRVCDILGDP 60

Query: 188 QWARSSKLINLSPQLTPLEVARILEIHK 271
           +W + S+L  L   L    + +I++ H+
Sbjct: 61  KWEKISELSGLIINLRTYHMVKIIQTHR 88


>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = +2

Query: 62  LRSLLGSHHFRRFSSKPNSSREFH----RNDFSNLVSKVCDILRDPQWARSSKLINLSPQ 229
           L SL GSH     SS+P+ S         N F  LVSK+  IL  P+W  SS+L +LSP+
Sbjct: 16  LFSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPK 75

Query: 230 LTPLEVARILEIHK 271
           L P  V  IL+ HK
Sbjct: 76  LKPHHVVNILQTHK 89


>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = +2

Query: 62  LRSLLGSHHFRRFSSKPNSSREFH----RNDFSNLVSKVCDILRDPQWARSSKLINLSPQ 229
           L SL GSH     SS+P+ S         N F  LVSK+  IL  P+W  SS+L +LSP+
Sbjct: 16  LFSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPK 75

Query: 230 LTPLEVARILEIHK 271
           L P  V  IL+ HK
Sbjct: 76  LKPHHVVNILQTHK 89


>ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
           gi|449530677|ref|XP_004172320.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
 Frame = +2

Query: 17  MVNLFKNLSLVHLQKLRSLLGSHHFRRFSSKPNSSREF----HRNDFSNLVSKVCDILRD 184
           M+   K L  +    L  LLGSH    FSS+P+ S       + + F  LVSK+  IL  
Sbjct: 1   MLKPHKTLPRMCFHSLYFLLGSHQSSNFSSQPHPSSPLSISSNTDPFPELVSKISIILSS 60

Query: 185 PQWARSSKLINLSPQLTPLEVARILEIH 268
           P W RSS+L +L P+L P  V  +L+ H
Sbjct: 61  PTWERSSELSHLIPKLKPHHVVNLLDTH 88