BLASTX nr result
ID: Cocculus23_contig00061972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00061972
(321 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001060360.1| Os07g0631100 [Oryza sativa Japonica Group] g... 76 4e-12
ref|XP_006657996.1| PREDICTED: transcription elongation factor 1... 76 5e-12
ref|XP_003564321.1| PREDICTED: transcription elongation factor 1... 76 5e-12
ref|XP_002437849.1| hypothetical protein SORBIDRAFT_10g003710 [S... 76 5e-12
gb|EMS46056.1| hypothetical protein TRIUR3_02755 [Triticum urart... 75 7e-12
ref|XP_004232939.1| PREDICTED: transcription elongation factor 1... 75 7e-12
ref|XP_006364323.1| PREDICTED: transcription elongation factor 1... 75 9e-12
gb|EPS63964.1| hypothetical protein M569_10817 [Genlisea aurea] 75 1e-11
ref|XP_004294148.1| PREDICTED: transcription elongation factor 1... 75 1e-11
ref|XP_004293909.1| PREDICTED: transcription elongation factor 1... 74 2e-11
ref|XP_006359796.1| PREDICTED: transcription elongation factor 1... 74 2e-11
ref|XP_007021610.1| Transcription elongation factor 1 isoform 1 ... 74 3e-11
ref|XP_007212318.1| hypothetical protein PRUPE_ppa014081mg [Prun... 74 3e-11
gb|ACG42921.1| hypothetical protein [Zea mays] 74 3e-11
ref|XP_004505112.1| PREDICTED: transcription elongation factor 1... 73 4e-11
ref|XP_007219609.1| hypothetical protein PRUPE_ppa023195mg [Prun... 73 4e-11
gb|EXB39509.1| hypothetical protein L484_011426 [Morus notabilis] 73 5e-11
ref|XP_006646844.1| PREDICTED: transcription elongation factor 1... 73 5e-11
ref|XP_006281330.1| hypothetical protein CARUB_v10027385mg [Caps... 73 5e-11
ref|XP_004146241.1| PREDICTED: transcription elongation factor 1... 73 5e-11
>ref|NP_001060360.1| Os07g0631100 [Oryza sativa Japonica Group]
gi|25453308|sp|Q8LHP0.1|ELOF1_ORYSJ RecName:
Full=Transcription elongation factor 1 homolog
gi|22296365|dbj|BAC10134.1| unknown protein [Oryza
sativa Japonica Group] gi|113611896|dbj|BAF22274.1|
Os07g0631100 [Oryza sativa Japonica Group]
gi|125538787|gb|EAY85182.1| hypothetical protein
OsI_06540 [Oryza sativa Indica Group]
gi|125601184|gb|EAZ40760.1| hypothetical protein
OsJ_25233 [Oryza sativa Japonica Group]
Length = 89
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN---DNDG 158
V+C D N +G CRICQE +ST +N LTE IDIYSEWIDECERVN D+DG
Sbjct: 34 VECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECERVNNVEDDDG 88
>ref|XP_006657996.1| PREDICTED: transcription elongation factor 1 homolog [Oryza
brachyantha]
Length = 89
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/55 (63%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN---DNDG 158
V+C D N +G CRICQE +ST +N LTE IDIYSEWIDECERVN D DG
Sbjct: 34 VECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECERVNNVEDEDG 88
>ref|XP_003564321.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
[Brachypodium distachyon]
gi|357125278|ref|XP_003564322.1| PREDICTED:
transcription elongation factor 1 homolog isoform 2
[Brachypodium distachyon]
Length = 89
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN---DNDG 158
V+C D N +G CRICQE +ST +N LTE IDIYSEWIDECERVN D+DG
Sbjct: 34 VECRIDMKNLIGEANCRICQENFSTTVNALTEPIDIYSEWIDECERVNTVEDDDG 88
>ref|XP_002437849.1| hypothetical protein SORBIDRAFT_10g003710 [Sorghum bicolor]
gi|514761574|ref|XP_004964822.1| PREDICTED:
transcription elongation factor 1 homolog isoform X1
[Setaria italica] gi|514761578|ref|XP_004964823.1|
PREDICTED: transcription elongation factor 1 homolog
isoform X2 [Setaria italica] gi|195604838|gb|ACG24249.1|
hypothetical protein [Zea mays]
gi|195606448|gb|ACG25054.1| hypothetical protein [Zea
mays] gi|195609588|gb|ACG26624.1| hypothetical protein
[Zea mays] gi|195615226|gb|ACG29443.1| transcription
elongation factor 1 [Zea mays]
gi|195618278|gb|ACG30969.1| hypothetical protein [Zea
mays] gi|195621712|gb|ACG32686.1| transcription
elongation factor 1 [Zea mays]
gi|195636870|gb|ACG37903.1| hypothetical protein [Zea
mays] gi|195652807|gb|ACG45871.1| transcription
elongation factor 1 [Zea mays]
gi|195652919|gb|ACG45927.1| transcription elongation
factor 1 [Zea mays] gi|224033669|gb|ACN35910.1| unknown
[Zea mays] gi|241916072|gb|EER89216.1| hypothetical
protein SORBIDRAFT_10g003710 [Sorghum bicolor]
gi|413923721|gb|AFW63653.1| transcription elongation
factor 1 [Zea mays]
Length = 89
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVNDNDG 158
V+C D N +G CRICQE +ST +N LTE IDIYSEWIDECERVN +G
Sbjct: 34 VECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECERVNTVEG 85
>gb|EMS46056.1| hypothetical protein TRIUR3_02755 [Triticum urartu]
gi|475539244|gb|EMT09364.1| hypothetical protein
F775_28085 [Aegilops tauschii]
Length = 89
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN---DNDG 158
V+C D N +G CRICQE +ST +N LTE IDIYSEWIDECERVN D+DG
Sbjct: 34 VECRIDMKNLIGEANCRICQESFSTTVNALTEPIDIYSEWIDECERVNTVEDDDG 88
>ref|XP_004232939.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
[Solanum lycopersicum] gi|460374282|ref|XP_004232940.1|
PREDICTED: transcription elongation factor 1 homolog
isoform 2 [Solanum lycopersicum]
gi|460374284|ref|XP_004232941.1| PREDICTED:
transcription elongation factor 1 homolog isoform 3
[Solanum lycopersicum]
Length = 89
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN---DNDGT 161
V+C D N +G CRICQE +ST + LTEAIDIYSEWIDECERVN D+DG+
Sbjct: 34 VECRIDMKNLIGEANCRICQESFSTTVTALTEAIDIYSEWIDECERVNNLEDDDGS 89
>ref|XP_006364323.1| PREDICTED: transcription elongation factor 1 homolog [Solanum
tuberosum]
Length = 89
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN---DNDG 158
V+C D N +G CRICQE +ST + LTEAIDIYSEWIDECERVN D+DG
Sbjct: 34 VECRIDMKNLIGEANCRICQESFSTTVTALTEAIDIYSEWIDECERVNNLEDDDG 88
>gb|EPS63964.1| hypothetical protein M569_10817 [Genlisea aurea]
Length = 89
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVNDND 155
V+C D N +G CRICQE +ST + +LTE IDIYSEWIDECERVN+ D
Sbjct: 34 VECRIDMKNLVGEATCRICQESFSTTVTSLTEPIDIYSEWIDECERVNNED 84
>ref|XP_004294148.1| PREDICTED: transcription elongation factor 1 homolog [Fragaria
vesca subsp. vesca]
Length = 91
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN-----DNDG 158
V+C D N +G +C ICQE +ST I LTEAIDIYSEWIDECERVN D+DG
Sbjct: 34 VECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECERVNTVDAVDDDG 90
>ref|XP_004293909.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
[Fragaria vesca subsp. vesca]
gi|470115445|ref|XP_004293910.1| PREDICTED:
transcription elongation factor 1 homolog isoform 2
[Fragaria vesca subsp. vesca]
Length = 89
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN 146
V+C D N +G CRICQE +ST +N L+EAIDIYSEWIDECERVN
Sbjct: 34 VECRLDMKNLIGEANCRICQEHFSTTVNALSEAIDIYSEWIDECERVN 81
>ref|XP_006359796.1| PREDICTED: transcription elongation factor 1 homolog [Solanum
tuberosum]
Length = 89
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN---DNDGT 161
V+C D N +G + C ICQE +ST + LTEAIDIYSEWIDECERVN D+DG+
Sbjct: 34 VECRIDMKNLIGEVNCMICQESFSTTVTALTEAIDIYSEWIDECERVNNLEDDDGS 89
>ref|XP_007021610.1| Transcription elongation factor 1 isoform 1 [Theobroma cacao]
gi|508721238|gb|EOY13135.1| Transcription elongation
factor 1 isoform 1 [Theobroma cacao]
Length = 88
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVND 149
V+C D N +G +CRICQE +ST I LTE IDIYSEWIDECERVN+
Sbjct: 34 VECRIDMKNLIGEAVCRICQESFSTTITALTEPIDIYSEWIDECERVNN 82
>ref|XP_007212318.1| hypothetical protein PRUPE_ppa014081mg [Prunus persica]
gi|595880917|ref|XP_007212319.1| hypothetical protein
PRUPE_ppa014081mg [Prunus persica]
gi|462408183|gb|EMJ13517.1| hypothetical protein
PRUPE_ppa014081mg [Prunus persica]
gi|462408184|gb|EMJ13518.1| hypothetical protein
PRUPE_ppa014081mg [Prunus persica]
Length = 88
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN--DNDG 158
V+C D N +G +C ICQE +ST I LTE ID+YSEWIDECERVN D+DG
Sbjct: 34 VECRIDMKNLIGEAICSICQENFSTTITALTEPIDVYSEWIDECERVNTVDDDG 87
>gb|ACG42921.1| hypothetical protein [Zea mays]
Length = 89
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVNDNDG 158
V+C D N +G CRICQE +S +N LTE IDIYSEWIDECERVN +G
Sbjct: 34 VECRIDMKNLIGEASCRICQENFSXTVNALTEPIDIYSEWIDECERVNTVEG 85
>ref|XP_004505112.1| PREDICTED: transcription elongation factor 1 homolog [Cicer
arietinum]
Length = 88
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN--DNDG 158
V+C D N +G CRICQE +ST I L+EAIDIYSEWIDECERVN ++DG
Sbjct: 34 VECRIDMKNLIGEASCRICQESFSTTITALSEAIDIYSEWIDECERVNTVEDDG 87
>ref|XP_007219609.1| hypothetical protein PRUPE_ppa023195mg [Prunus persica]
gi|462416071|gb|EMJ20808.1| hypothetical protein
PRUPE_ppa023195mg [Prunus persica]
Length = 88
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN 146
V+C D N +G LC +CQE YST I LTE ID+YSEWIDECERVN
Sbjct: 34 VECDIDMKNMIGEALCSVCQESYSTTITALTEPIDVYSEWIDECERVN 81
>gb|EXB39509.1| hypothetical protein L484_011426 [Morus notabilis]
Length = 88
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN--DNDG 158
V+C D N +G CRICQE +ST I LTE IDIYSEWIDECERVN ++DG
Sbjct: 34 VECRIDMKNLIGEASCRICQESFSTTITALTEPIDIYSEWIDECERVNNLEDDG 87
>ref|XP_006646844.1| PREDICTED: transcription elongation factor 1 homolog [Oryza
brachyantha]
Length = 110
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN--DNDGTT 164
V+C D N +G CRIC E +ST +N LTE IDIYSEWIDECERVN + D TT
Sbjct: 34 VECRIDLKNLIGEASCRICLESFSTTVNALTEPIDIYSEWIDECERVNNLEEDNTT 89
>ref|XP_006281330.1| hypothetical protein CARUB_v10027385mg [Capsella rubella]
gi|482550034|gb|EOA14228.1| hypothetical protein
CARUB_v10027385mg [Capsella rubella]
Length = 120
Score = 72.8 bits (177), Expect = 5e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVN 146
V+C+ D + +G CRIC+E++ST I LTEAIDIYSEWIDECERVN
Sbjct: 34 VECSIDMKHLIGKATCRICEEQFSTTITALTEAIDIYSEWIDECERVN 81
>ref|XP_004146241.1| PREDICTED: transcription elongation factor 1 homolog [Cucumis
sativus]
Length = 88
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3
Query: 3 VDCTFDKDNRLGTLLCRICQERYSTLINTLTEAIDIYSEWIDECERVND 149
V+C D N +G CRICQE +ST I L+EAIDIYSEWIDECERVN+
Sbjct: 34 VECRIDMKNLIGEASCRICQESFSTTITALSEAIDIYSEWIDECERVNN 82