BLASTX nr result
ID: Cocculus23_contig00061870
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00061870
(327 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera] 47 6e-08
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 55 1e-07
emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera] 46 2e-07
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 45 3e-07
ref|XP_006579236.1| PREDICTED: uncharacterized protein LOC102665... 45 6e-07
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 54 1e-06
ref|XP_006595312.1| PREDICTED: uncharacterized protein LOC102668... 40 1e-06
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 42 4e-06
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 52 5e-06
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 52 5e-06
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera] 43 5e-06
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 51 8e-06
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 51 8e-06
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 51 8e-06
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 51 8e-06
>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
Length = 955
Score = 47.4 bits (111), Expect(2) = 6e-08
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Frame = +2
Query: 26 PIDSTSLNLDSSMPVSQIENSDLPIVSTNSHP---------MVIRSKFGISKPNKFYLCQ 178
P S L ++P+S NSD P S N+ P MV RSK GI KP K Y
Sbjct: 476 PSSSNLYALPGTIPLST--NSDEPNESINTRPVTLPQQPHHMVTRSKNGIFKP-KVYTVD 532
Query: 179 SNMSEQEPSTVQEAMQNTKWRDAMLE 256
N+ +EP+T QEA+ + KW++AM E
Sbjct: 533 LNV--EEPNTFQEAISHPKWKEAMDE 556
Score = 35.0 bits (79), Expect(2) = 6e-08
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 259 YTVVLKNQTWSLVPLPPNRNSVG 327
+ ++KN+TWSLV LP NR SVG
Sbjct: 558 FRALMKNKTWSLVSLPTNRTSVG 580
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 55.1 bits (131), Expect(2) = 1e-07
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 8 SPTCSSPIDSTSLNLDSSMPVSQIENSDLPIVSTNSHPMVIRSKFGISKPNKFY-LCQSN 184
SP SSP S + P Q++ P+ TN H MV R K GISKPNK Y L
Sbjct: 856 SPARSSPASSPQGSPIQMAPAQQVQ---APV--TNEHAMVTRGKEGISKPNKRYVLLTHK 910
Query: 185 MSEQEPSTVQEAMQNTKWRDAMLE 256
+S EP TV EA+++ W +AM E
Sbjct: 911 VSIPEPKTVTEALKHPGWNNAMQE 934
Score = 26.2 bits (56), Expect(2) = 1e-07
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 274 KNQTWSLVPLPPNRNSVG 327
+ +TW+LVP PN N +G
Sbjct: 941 ETETWTLVPYSPNMNVLG 958
>emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]
Length = 1124
Score = 45.8 bits (107), Expect(2) = 2e-07
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Frame = +2
Query: 20 SSPIDSTS--LNLDSSMPVSQIENSDLPIVSTNS---------HPMVIRSKFGISKPNKF 166
S+ I S+S L S++P+S NSD P S N+ H MV RSK GI KP +
Sbjct: 434 SASISSSSNLYALPSTIPLST--NSDEPNESINTRLVTLPQQPHHMVTRSKNGIFKPKVY 491
Query: 167 YLCQSNMSEQEPSTVQEAMQNTKWRDAMLE 256
+ +++ +EP+T QE + + KW++AM E
Sbjct: 492 TI---DLNVEEPNTFQETISHPKWKEAMDE 518
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 259 YTVVLKNQTWSLVPLPPNRNSVG 327
+ ++KN+TWSLV LP NR SVG
Sbjct: 520 FRALMKNKTWSLVSLPSNRTSVG 542
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 45.1 bits (105), Expect(2) = 3e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Frame = +2
Query: 50 LDSSMPVSQIENSDLPIVSTNSHP---------MVIRSKFGISKPNKFYLCQSNMSEQEP 202
L ++P+S NSD P S N+ P MV RSK GI KP + + +++ +EP
Sbjct: 693 LPGTIPLST--NSDEPNESINTRPVTXPQQPHHMVTRSKNGIFKPXVYTV---DLNVEEP 747
Query: 203 STVQEAMQNTKWRDAMLE 256
+T QEA+ + KW++AM E
Sbjct: 748 NTFQEAISHPKWKEAMDE 765
Score = 35.0 bits (79), Expect(2) = 3e-07
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 259 YTVVLKNQTWSLVPLPPNRNSVG 327
+ ++KN+TWSLV LP NR SVG
Sbjct: 767 FRALMKNKTWSLVSLPTNRTSVG 789
>ref|XP_006579236.1| PREDICTED: uncharacterized protein LOC102665202 [Glycine max]
Length = 1364
Score = 44.7 bits (104), Expect(2) = 6e-07
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSMPVSQIENSDLPIVSTNSHPMVIRSKFGISKPNKFYLCQS 181
S+SP + ++S +S P S P +TN+H M+ RSK G KP F
Sbjct: 101 SLSPAILPSVIASSTIDPNSTPTSS------PSPTTNTHHMLTRSKTGHLKPPLFPTI-- 152
Query: 182 NMSEQEPSTVQEAMQNTKWRDAM 250
N++ EP+TVQ+A+ + W +AM
Sbjct: 153 NLTTTEPTTVQQALSSIHWTEAM 175
Score = 34.3 bits (77), Expect(2) = 6e-07
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 259 YTVVLKNQTWSLVPLPPNRNSVG 327
Y + N+TWSLVPLPP++ ++G
Sbjct: 179 YQALQANKTWSLVPLPPHKRAIG 201
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 53.9 bits (128), Expect(2) = 1e-06
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSM-----PVSQIENSDLPIVSTNSHPMVIRSKFGISKPN-K 163
S SPT S+ STSL S + P++QI N++ N+H M R+K GI KPN K
Sbjct: 872 SPSPTTSASSSSTSLTPPSILIHPPPPLAQIVNNNNQ-APLNTHSMGTRAKAGIIKPNPK 930
Query: 164 FYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
+ L S +E EP T +A+++ +WR+AM
Sbjct: 931 YSLAVSLAAESEPRTAIQALKDERWRNAM 959
Score = 23.9 bits (50), Expect(2) = 1e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 NQTWSLVPLPPNRNSV 324
N TW LVP PP+ ++
Sbjct: 969 NHTWDLVPPPPSHVTI 984
>ref|XP_006595312.1| PREDICTED: uncharacterized protein LOC102668660 [Glycine max]
Length = 554
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 20 SSPIDSTSLNLDSSMPVSQIENSDLPIVSTNSHPMVIRSKFGISKPNKFYLCQSNMSEQE 199
+SP + DSS P +E+ + +TN+HPM RSK I P + ++ E
Sbjct: 395 ASPTFVSQPESDSSSPRESLEHGEPVSRTTNAHPMQTRSKSRIYTPQIHH--SLFLAHSE 452
Query: 200 PSTVQEAMQNTKWRDAM 250
P V++A+ ++ W AM
Sbjct: 453 PKGVKQALTDSNWLSAM 469
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 259 YTVVLKNQTWSLVPLPPNRNSVG 327
Y +LKN TW LVPLP NR +VG
Sbjct: 473 YAALLKNHTWDLVPLPSNRKAVG 495
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 42.0 bits (97), Expect(2) = 4e-06
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 65 PVSQIENSDLPIVSTNSHPMVIRSKFGISKPNKFYLCQSNMSEQEPSTVQEAMQNTKWRD 244
P + +++S PI HPM+ RSK GI K K YL + EP TV++A+Q+ W+
Sbjct: 761 PTTSLQDSTAPIPG---HPMITRSKSGICK-KKTYLTSLTI---EPRTVKQALQDPNWKV 813
Query: 245 AM 250
AM
Sbjct: 814 AM 815
Score = 34.3 bits (77), Expect(2) = 4e-06
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 259 YTVVLKNQTWSLVPLPPNRNSVG 327
Y +LKNQTWSLVP P N +G
Sbjct: 819 YQALLKNQTWSLVPPPSNAKIIG 841
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 52.0 bits (123), Expect(2) = 5e-06
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSM-----PVSQI--ENSDLPIVSTNSHPMVIRSKFGISKPN 160
S SPT S+ STS S + P++QI N+ PI N+H M R+K GI KPN
Sbjct: 866 SPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPI---NTHSMGTRAKAGIIKPN 922
Query: 161 -KFYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
K+ L S +E EP T +A+++ +WR+AM
Sbjct: 923 LKYSLAVSLAAESEPRTAIQALKDERWRNAM 953
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 NQTWSLVPLPPNRNSV 324
N TW LVP PP+ ++
Sbjct: 963 NHTWDLVPPPPSHVTI 978
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 52.0 bits (123), Expect(2) = 5e-06
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSM-----PVSQI--ENSDLPIVSTNSHPMVIRSKFGISKPN 160
S SPT S+ STS S + P++QI N+ PI N+H M R+K GI KPN
Sbjct: 866 SPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPI---NTHSMGTRAKAGIIKPN 922
Query: 161 -KFYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
K+ L S +E EP T +A+++ +WR+AM
Sbjct: 923 LKYSLAVSLAAESEPRTAIQALKDERWRNAM 953
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 NQTWSLVPLPPNRNSV 324
N TW LVP PP+ ++
Sbjct: 963 NHTWDLVPPPPSHVTI 978
>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
Length = 1270
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNL----DSSMPVSQIENSDLPIVST-------NSHPMVIRSKFGI 148
S PT S PI ++S + DS P+ Q+ S P + N+HPMV R+K GI
Sbjct: 685 SSPPTVSFPIPTSSTDCTSTSDSLPPLLQVPFSPTPSPTPSSSPSPLNTHPMVTRAKSGI 744
Query: 149 SKPNKFYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
K F + + EP T +A ++ W AM
Sbjct: 745 HKKKSFLM----QTTSEPHTYSQAFKSEPWVQAM 774
Score = 33.1 bits (74), Expect(2) = 5e-06
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 259 YTVVLKNQTWSLVPLPPNRNSVG 327
Y +L+N TWSLVP PP+ + VG
Sbjct: 778 YQALLRNHTWSLVPPPPSAHIVG 800
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 51.2 bits (121), Expect(2) = 8e-06
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSM-----PVSQIENSDLPIVSTNSHPMVIRSKFGISKPN-K 163
S SPT S+ STS S + P++QI N++ N+H M R+K GI KPN K
Sbjct: 885 SPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQ-APLNTHSMGTRAKAGIIKPNPK 943
Query: 164 FYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
+ L S +E EP T +A+++ +WR+AM
Sbjct: 944 YSLAVSLAAESEPRTAIQALKDERWRNAM 972
Score = 23.9 bits (50), Expect(2) = 8e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 NQTWSLVPLPPNRNSV 324
N TW LVP PP+ ++
Sbjct: 982 NHTWDLVPPPPSHVTI 997
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 51.2 bits (121), Expect(2) = 8e-06
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSM-----PVSQIENSDLPIVSTNSHPMVIRSKFGISKPN-K 163
S SPT S+ STS S + P++QI N++ N+H M R+K GI KPN K
Sbjct: 885 SPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQ-APLNTHSMGTRAKAGIIKPNPK 943
Query: 164 FYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
+ L S +E EP T +A+++ +WR+AM
Sbjct: 944 YSLAVSLAAESEPRTAIQALKDERWRNAM 972
Score = 23.9 bits (50), Expect(2) = 8e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 NQTWSLVPLPPNRNSV 324
N TW LVP PP+ ++
Sbjct: 982 NHTWDLVPPPPSHVTI 997
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 51.2 bits (121), Expect(2) = 8e-06
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSM-----PVSQIENSDLPIVSTNSHPMVIRSKFGISKPN-K 163
S SPT S+ STS S + P++QI N++ N+H M R+K GI KPN K
Sbjct: 885 SPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQ-APLNTHSMGTRAKAGIIKPNPK 943
Query: 164 FYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
+ L S +E EP T +A+++ +WR+AM
Sbjct: 944 YSLAVSLAAESEPRTAIQALKDERWRNAM 972
Score = 23.9 bits (50), Expect(2) = 8e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 NQTWSLVPLPPNRNSV 324
N TW LVP PP+ ++
Sbjct: 982 NHTWDLVPPPPSHVTI 997
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 51.2 bits (121), Expect(2) = 8e-06
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 SVSPTCSSPIDSTSLNLDSSM-----PVSQIENSDLPIVSTNSHPMVIRSKFGISKPN-K 163
S SPT S+ STS S + P++QI N++ N+H M R+K GI KPN K
Sbjct: 850 SPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQ-APLNTHSMGTRAKAGIIKPNPK 908
Query: 164 FYLCQSNMSEQEPSTVQEAMQNTKWRDAM 250
+ L S +E EP T +A+++ +WR+AM
Sbjct: 909 YSLAVSLAAESEPRTAIQALKDERWRNAM 937
Score = 23.9 bits (50), Expect(2) = 8e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 277 NQTWSLVPLPPNRNSV 324
N TW LVP PP+ ++
Sbjct: 947 NHTWDLVPPPPSHVTI 962