BLASTX nr result
ID: Cocculus23_contig00061811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00061811
(293 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera] 69 2e-16
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 69 2e-16
ref|XP_002262798.2| PREDICTED: transcription initiation factor I... 69 2e-16
ref|XP_006467340.1| PREDICTED: transcription initiation factor I... 67 2e-15
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr... 67 2e-15
ref|XP_006449856.1| hypothetical protein CICLE_v10014841mg [Citr... 67 2e-15
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus... 62 4e-14
gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus... 62 4e-14
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 61 1e-13
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol... 61 2e-13
ref|XP_007026249.1| Transcription activators,DNA binding,RNA pol... 61 2e-13
ref|XP_007026250.1| Transcription activators,DNA binding,RNA pol... 61 2e-13
ref|XP_007026248.1| Transcription activators,DNA binding,RNA pol... 61 2e-13
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A... 58 5e-13
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 59 5e-13
ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prun... 59 6e-12
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|... 55 1e-11
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|... 55 2e-11
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 53 3e-11
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 53 3e-11
>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
Length = 435
Score = 68.9 bits (167), Expect(2) = 2e-16
Identities = 37/63 (58%), Positives = 39/63 (61%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRKS GDD K NG P KKVKTENESKSSAKD S K +G+ S KT S
Sbjct: 310 KGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATAKGTPSSSVKTGSTS 369
Query: 184 SAG 192
SAG
Sbjct: 370 SAG 372
Score = 42.4 bits (98), Expect(2) = 2e-16
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 197 GLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
G +EDEIRA LL+ APVTT+DL A+FK LK
Sbjct: 372 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLK 403
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 68.6 bits (166), Expect(2) = 2e-16
Identities = 37/63 (58%), Positives = 39/63 (61%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRKS GDD K NG P KKVKTENESKSSAKD S K +G+ S KT S
Sbjct: 414 KGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTS 473
Query: 184 SAG 192
SAG
Sbjct: 474 SAG 476
Score = 42.4 bits (98), Expect(2) = 2e-16
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 197 GLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
G +EDEIRA LL+ APVTT+DL A+FK LK
Sbjct: 476 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLK 507
>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Vitis vinifera]
Length = 534
Score = 68.6 bits (166), Expect(2) = 2e-16
Identities = 37/63 (58%), Positives = 39/63 (61%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRKS GDD K NG P KKVKTENESKSSAKD S K +G+ S KT S
Sbjct: 409 KGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTS 468
Query: 184 SAG 192
SAG
Sbjct: 469 SAG 471
Score = 42.4 bits (98), Expect(2) = 2e-16
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 197 GLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
G +EDEIRA LL+ APVTT+DL A+FK LK
Sbjct: 471 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLK 502
>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Citrus sinensis]
gi|568825955|ref|XP_006467341.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Citrus sinensis]
Length = 538
Score = 66.6 bits (161), Expect(2) = 2e-15
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRKS GDDA+A +GAP KKVKTENE+KSSA+D S+ KS+ +G+ SS+T S
Sbjct: 414 KGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPAKGA--SSSRTGSTS 471
Query: 184 SAG 192
++G
Sbjct: 472 ASG 474
Score = 41.2 bits (95), Expect(2) = 2e-15
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
+G + +EIRA LL+ APVTT+DL A+FKP L+
Sbjct: 473 SGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLR 505
>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|567915083|ref|XP_006449855.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552465|gb|ESR63094.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 66.6 bits (161), Expect(2) = 2e-15
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRKS GDDA+A +GAP KKVKTENE+KSSA+D S+ KS+ +G+ SS+T S
Sbjct: 414 KGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPAKGA--SSSRTGSTS 471
Query: 184 SAG 192
++G
Sbjct: 472 ASG 474
Score = 41.2 bits (95), Expect(2) = 2e-15
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
+G + +EIRA LL+ APVTT+DL A+FKP L+
Sbjct: 473 SGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLR 505
>ref|XP_006449856.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|557552467|gb|ESR63096.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 420
Score = 66.6 bits (161), Expect(2) = 2e-15
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRKS GDDA+A +GAP KKVKTENE+KSSA+D S+ KS+ +G+ SS+T S
Sbjct: 296 KGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPAKGA--SSSRTGSTS 353
Query: 184 SAG 192
++G
Sbjct: 354 ASG 356
Score = 41.2 bits (95), Expect(2) = 2e-15
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
+G + +EIRA LL+ APVTT+DL A+FKP L+
Sbjct: 355 SGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLR 387
>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
Length = 534
Score = 62.4 bits (150), Expect(2) = 4e-14
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPS-SKTASL 180
K+KRKS G+++K NGAP KK KTENE K S KD SS KS+ T+G+ PP+ S +AS
Sbjct: 408 KSKRKSNGEESKTTNGAPLKKAKTENEVK-SVKDEIGSSSKSSAPTKGATPPAPSVSASA 466
Query: 181 PSAG 192
P G
Sbjct: 467 PPTG 470
Score = 40.8 bits (94), Expect(2) = 4e-14
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
TG +E+EIRA LL+ PVTT+DL A+FK LK
Sbjct: 469 TGPVTEEEIRAVLLQKMPVTTQDLVAKFKSRLK 501
>gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
Length = 392
Score = 62.4 bits (150), Expect(2) = 4e-14
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPS-SKTASL 180
K+KRKS G+++K NGAP KK KTENE K S KD SS KS+ T+G+ PP+ S +AS
Sbjct: 266 KSKRKSNGEESKTTNGAPLKKAKTENEVK-SVKDEIGSSSKSSAPTKGATPPAPSVSASA 324
Query: 181 PSAG 192
P G
Sbjct: 325 PPTG 328
Score = 40.8 bits (94), Expect(2) = 4e-14
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
TG +E+EIRA LL+ PVTT+DL A+FK LK
Sbjct: 327 TGPVTEEEIRAVLLQKMPVTTQDLVAKFKSRLK 359
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 60.8 bits (146), Expect(2) = 1e-13
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGS-----LPPSSK 168
K KRK G+DAK++NGAP KKVKTENE K P ++S+PAT+G+ PPSSK
Sbjct: 415 KGKRKLNGEDAKSSNGAPVKKVKTENEVK------PAVKEESSPATKGTATPKVTPPSSK 468
Query: 169 TAS 177
T S
Sbjct: 469 TGS 471
Score = 40.8 bits (94), Expect(2) = 1e-13
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
TG +E+EIRA LL+ PVTT+DL ARFK L+
Sbjct: 476 TGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLR 508
>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 1 [Theobroma cacao]
gi|508781613|gb|EOY28869.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 1 [Theobroma cacao]
Length = 549
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRK+ GDD KA+NG P KKVK+E +SKSS K+ S+ K + +G+ P S+K S
Sbjct: 410 KGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGT-PSSAKAGSTS 468
Query: 184 SAGDRSSLR 210
SA SS +
Sbjct: 469 SAVTSSSAK 477
Score = 40.0 bits (92), Expect(2) = 2e-13
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2
Query: 197 GLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
G +E+EIRA LL+ APVTT DL A+FK LK
Sbjct: 485 GPVTEEEIRAVLLQKAPVTTSDLVAKFKARLK 516
>ref|XP_007026249.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 3 [Theobroma cacao]
gi|508781615|gb|EOY28871.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 3 [Theobroma cacao]
Length = 496
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRK+ GDD KA+NG P KKVK+E +SKSS K+ S+ K + +G+ P S+K S
Sbjct: 357 KGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGT-PSSAKAGSTS 415
Query: 184 SAGDRSSLR 210
SA SS +
Sbjct: 416 SAVTSSSAK 424
Score = 40.0 bits (92), Expect(2) = 2e-13
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2
Query: 197 GLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
G +E+EIRA LL+ APVTT DL A+FK LK
Sbjct: 432 GPVTEEEIRAVLLQKAPVTTSDLVAKFKARLK 463
>ref|XP_007026250.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 4 [Theobroma cacao]
gi|508781616|gb|EOY28872.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 4 [Theobroma cacao]
Length = 480
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRK+ GDD KA+NG P KKVK+E +SKSS K+ S+ K + +G+ P S+K S
Sbjct: 341 KGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGT-PSSAKAGSTS 399
Query: 184 SAGDRSSLR 210
SA SS +
Sbjct: 400 SAVTSSSAK 408
Score = 40.0 bits (92), Expect(2) = 2e-13
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2
Query: 197 GLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
G +E+EIRA LL+ APVTT DL A+FK LK
Sbjct: 416 GPVTEEEIRAVLLQKAPVTTSDLVAKFKARLK 447
>ref|XP_007026248.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 2 [Theobroma cacao]
gi|508781614|gb|EOY28870.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 2 [Theobroma cacao]
Length = 473
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRK+ GDD KA+NG P KKVK+E +SKSS K+ S+ K + +G+ P S+K S
Sbjct: 334 KGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGT-PSSAKAGSTS 392
Query: 184 SAGDRSSLR 210
SA SS +
Sbjct: 393 SAVTSSSAK 401
Score = 40.0 bits (92), Expect(2) = 2e-13
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +2
Query: 197 GLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
G +E+EIRA LL+ APVTT DL A+FK LK
Sbjct: 409 GPVTEEEIRAVLLQKAPVTTSDLVAKFKARLK 440
>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
gi|548861791|gb|ERN19162.1| hypothetical protein
AMTR_s00061p00167160 [Amborella trichopoda]
Length = 558
Score = 58.2 bits (139), Expect(2) = 5e-13
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESK--SSAKDGPTSSDKSN-----PATQGSLPPS 162
KAKRKSG DDAK A APSKK K EN+SK ++ KD P S+ +SN P++ G+ P
Sbjct: 428 KAKRKSGSDDAKPAASAPSKKPKIENDSKPATTVKDEPASAQRSNTPVKLPSSSGTKPAG 487
Query: 163 SKTAS 177
S A+
Sbjct: 488 SPVAA 492
Score = 41.6 bits (96), Expect(2) = 5e-13
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 206 SEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
+EDEIRA LL+MAPVTT+DL +FK L+
Sbjct: 497 TEDEIRAVLLQMAPVTTQDLVGKFKARLR 525
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 58.9 bits (141), Expect(2) = 5e-13
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGS-----LPPSSK 168
K KRK DDAK +NGAP KKVKTENE K PT ++S+PAT+G+ +P SSK
Sbjct: 415 KGKRKLNADDAKTSNGAPVKKVKTENEVK------PTVKEESSPATKGTATPKIMPSSSK 468
Query: 169 TASLPSAG 192
T P++G
Sbjct: 469 TG--PTSG 474
Score = 40.8 bits (94), Expect(2) = 5e-13
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
TG +E+EIRA LL+ PVTT+DL ARFK L+
Sbjct: 476 TGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLR 508
>ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
gi|462407404|gb|EMJ12738.1| hypothetical protein
PRUPE_ppa003970mg [Prunus persica]
Length = 537
Score = 58.9 bits (141), Expect(2) = 6e-12
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRK DDAK +N AP KKVK+ENE K S K+ P S+ KS+ ++G+ PS K
Sbjct: 413 KGKRKLSADDAKTSNSAPPKKVKSENEQKVSTKEEPASASKSSTPSKGT--PSVKVEPTS 470
Query: 184 SAG 192
S+G
Sbjct: 471 SSG 473
Score = 37.0 bits (84), Expect(2) = 6e-12
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
+G +E+EIR L++ PVTT+DL ARFK L+
Sbjct: 472 SGPVTEEEIRTVLVQRTPVTTQDLVARFKARLR 504
>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
[Ricinus communis]
Length = 533
Score = 55.5 bits (132), Expect(2) = 1e-11
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTAS 177
K KRK D+AK N AP KKVKTENE K + K+ + KS+ AT + PPS+KT S
Sbjct: 412 KGKRKLNSDEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSS-ATPKAAPPSAKTGS 468
Score = 39.7 bits (91), Expect(2) = 1e-11
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2
Query: 206 SEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
+E+EIRA LL+ PVTT+DL ARFK LK
Sbjct: 473 TEEEIRAVLLQNGPVTTQDLVARFKSRLK 501
>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
[Ricinus communis]
Length = 584
Score = 54.7 bits (130), Expect(2) = 2e-11
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDG--PTSSDKSNPATQGSLPPSSKTAS 177
K KRK+ GDD K +N +P KKVKTENESK K+ PTS KS+ +G+ S +T S
Sbjct: 458 KGKRKTNGDDGKTSNVSPQKKVKTENESKHIVKEENVPTSKSKSSANPKGA-AASLRTES 516
Query: 178 LPSAG 192
S G
Sbjct: 517 TSSTG 521
Score = 39.7 bits (91), Expect(2) = 2e-11
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
TG +++EI+A LL+ PVTT+DL A+FK LK
Sbjct: 520 TGFVTDEEIKAVLLQNGPVTTQDLVAKFKSRLK 552
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Solanum tuberosum]
gi|565371550|ref|XP_006352366.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X3 [Solanum tuberosum]
Length = 538
Score = 52.8 bits (125), Expect(2) = 3e-11
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRK+ GD++K +GAP KKVKTE ++K + P+S+ N A SSKTA P
Sbjct: 411 KTKRKANGDESKPTSGAPLKKVKTETDAKPGKDETPSSA--KNSALPKGASSSSKTAPSP 468
Query: 184 SAG 192
+ G
Sbjct: 469 ATG 471
Score = 40.8 bits (94), Expect(2) = 3e-11
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
TG +EDEIRA LL+ PVTT+DL ++FK LK
Sbjct: 470 TGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLK 502
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 52.8 bits (125), Expect(2) = 3e-11
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +1
Query: 4 KAKRKSGGDDAKAANGAPSKKVKTENESKSSAKDGPTSSDKSNPATQGSLPPSSKTASLP 183
K KRK+ GD++K +GAP KKVKTE ++K + P+S+ N A SSKTA P
Sbjct: 411 KTKRKANGDESKPTSGAPLKKVKTETDAKPGKDETPSSA--KNSALPKGASSSSKTAPSP 468
Query: 184 SAG 192
+ G
Sbjct: 469 ATG 471
Score = 40.8 bits (94), Expect(2) = 3e-11
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 194 TGLPSEDEIRAFLLRMAPVTTRDLAARFKPMLK 292
TG +EDEIRA LL+ PVTT+DL ++FK LK
Sbjct: 470 TGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLK 502