BLASTX nr result

ID: Cocculus23_contig00061633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00061633
         (241 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007201188.1| hypothetical protein PRUPE_ppa002996mg [Prun...    59   9e-07
ref|XP_006486584.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06
ref|XP_006422411.1| hypothetical protein CICLE_v10028001mg [Citr...    56   5e-06
emb|CBI37724.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_007201188.1| hypothetical protein PRUPE_ppa002996mg [Prunus persica]
           gi|462396588|gb|EMJ02387.1| hypothetical protein
           PRUPE_ppa002996mg [Prunus persica]
          Length = 613

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = +3

Query: 120 PSVLVDEFSKFCHQRDLSRAMDAMKSLQEHGIRADAIAYS 239
           PS LVDEF+KFC+QRDL RAM AM+++Q  GI AD++ YS
Sbjct: 9   PSTLVDEFTKFCYQRDLPRAMTAMEAMQRRGIWADSLVYS 48


>ref|XP_006486584.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Citrus sinensis]
          Length = 645

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = +3

Query: 117 NPSVLVDEFSKFCHQRDLSRAMDAMKSLQEHGIRADAIAYS 239
           N S L+D+F++FC+QRDL RAM AM ++Q HG+RAD++ Y+
Sbjct: 40  NSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYA 80


>ref|XP_006422411.1| hypothetical protein CICLE_v10028001mg [Citrus clementina]
           gi|557524345|gb|ESR35651.1| hypothetical protein
           CICLE_v10028001mg [Citrus clementina]
          Length = 643

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = +3

Query: 117 NPSVLVDEFSKFCHQRDLSRAMDAMKSLQEHGIRADAIAYS 239
           N S L+D+F++FC+QRDL RAM AM ++Q HG+RAD++ Y+
Sbjct: 38  NSSSLLDDFTRFCYQRDLPRAMKAMHAMQCHGVRADSVTYA 78


>emb|CBI37724.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 117 NPSVLVDEFSKFCHQRDLSRAMDAMKSLQEHGIRADAIAYS 239
           +PS LV+EF+ FCHQ DL RAM AM +++ HG+ ADAI YS
Sbjct: 10  DPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYS 50


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 117 NPSVLVDEFSKFCHQRDLSRAMDAMKSLQEHGIRADAIAYS 239
           +PS LV+EF+ FCHQ DL RAM AM +++ HG+ ADAI YS
Sbjct: 19  DPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYS 59


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