BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00061621
         (266 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   126   4e-27
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              125   6e-27
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   125   6e-27
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   122   5e-26
ref|XP_007221976.1| hypothetical protein PRUPE_ppa002791mg [Prun...   120   2e-25
ref|XP_007022286.1| Tetratricopeptide repeat (TPR)-like superfam...   119   4e-25
ref|XP_006478378.1| PREDICTED: pentatricopeptide repeat-containi...   118   8e-25
ref|XP_006441639.1| hypothetical protein CICLE_v10019278mg [Citr...   118   8e-25
gb|EXC31027.1| hypothetical protein L484_021329 [Morus notabilis]     117   1e-24
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_006360760.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_004247672.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_006351115.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
ref|XP_007157004.1| hypothetical protein PHAVU_002G035600g [Phas...   116   4e-24
ref|XP_004301491.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
ref|XP_002890536.1| pentatricopeptide repeat-containing protein ...   115   8e-24
ref|XP_006306895.1| hypothetical protein CARUB_v10008463mg [Caps...   112   4e-23
ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi...   111   9e-23
ref|NP_177305.1| pentatricopeptide repeat-containing protein [Ar...   110   2e-22
ref|XP_006300817.1| hypothetical protein CARUB_v10019902mg [Caps...   110   2e-22

>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  126 bits (316), Expect = 4e-27
 Identities = 59/83 (71%), Positives = 72/83 (86%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR EEA+ +FREML  G EPNYVTI SILPLCAR+ANL+HG+E HC+ILRR  F D LL
Sbjct: 409 MDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLL 468

Query: 182 LYNSLVDLYSKSGKILEAQRLFD 250
           L+NSLVD+Y++SGK+LEA+RLFD
Sbjct: 469 LWNSLVDMYARSGKVLEAKRLFD 491


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  125 bits (314), Expect = 6e-27
 Identities = 55/86 (63%), Positives = 74/86 (86%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR EEA+ + REML FG EPNYVTI S+LPLCAR+ANL+HG+E HC++ RR  F D LL
Sbjct: 371 MDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 430

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIMG 259
           L+N+LVD+Y++SGK+LEA+R+FD++G
Sbjct: 431 LWNALVDMYARSGKVLEARRVFDMLG 456


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  125 bits (314), Expect = 6e-27
 Identities = 55/86 (63%), Positives = 74/86 (86%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR EEA+ + REML FG EPNYVTI S+LPLCAR+ANL+HG+E HC++ RR  F D LL
Sbjct: 416 MDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 475

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIMG 259
           L+N+LVD+Y++SGK+LEA+R+FD++G
Sbjct: 476 LWNALVDMYARSGKVLEARRVFDMLG 501


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  122 bits (306), Expect = 5e-26
 Identities = 54/86 (62%), Positives = 73/86 (84%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR EEA+ + REML  G EPNYVTI S+LPLCAR+ANL+HG+E HC++ RR  F D LL
Sbjct: 490 MDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 549

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIMG 259
           L+N+LVD+Y++SGK+LEA+R+FD++G
Sbjct: 550 LWNALVDMYARSGKVLEARRVFDMLG 575


>ref|XP_007221976.1| hypothetical protein PRUPE_ppa002791mg [Prunus persica]
           gi|462418912|gb|EMJ23175.1| hypothetical protein
           PRUPE_ppa002791mg [Prunus persica]
          Length = 633

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/85 (65%), Positives = 72/85 (84%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR EEA+ +FREML  G EPNY+TI SILPLCAR+ANL+HG+E HC+I +R  F D LL
Sbjct: 316 MDRAEEASFLFREMLCSGIEPNYITIASILPLCARVANLQHGKEFHCYITKRVVFDDYLL 375

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIM 256
           L+N+LVD+Y++SGKILEA+R+FD M
Sbjct: 376 LWNALVDMYARSGKILEAKRVFDSM 400


>ref|XP_007022286.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508721914|gb|EOY13811.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 739

 Score =  119 bits (298), Expect = 4e-25
 Identities = 54/85 (63%), Positives = 72/85 (84%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           L + EEA+ +FREML  G EPNYVTI SILPLCAR+ANL+HG+E HC+I RR+ F D LL
Sbjct: 418 LGQSEEASFLFREMLLSGLEPNYVTIASILPLCARVANLQHGKEFHCYITRRKVFEDCLL 477

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIM 256
           L+N+L+D+Y++SGK+L A+R+FD+M
Sbjct: 478 LWNALIDMYARSGKVLAAKRVFDLM 502


>ref|XP_006478378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Citrus sinensis]
          Length = 710

 Score =  118 bits (296), Expect = 8e-25
 Identities = 55/85 (64%), Positives = 71/85 (83%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           LDR EE+A +FREM   G EPNYVTI SILPLCAR+ANL+HG+E HC+ILRR  F + LL
Sbjct: 389 LDRAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLL 448

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIM 256
           L+NSLV++Y++SGK+ EA+ +FD+M
Sbjct: 449 LWNSLVEMYARSGKVPEAKSVFDLM 473


>ref|XP_006441639.1| hypothetical protein CICLE_v10019278mg [Citrus clementina]
           gi|557543901|gb|ESR54879.1| hypothetical protein
           CICLE_v10019278mg [Citrus clementina]
          Length = 634

 Score =  118 bits (296), Expect = 8e-25
 Identities = 55/85 (64%), Positives = 71/85 (83%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           LDR EE+A +FREM   G EPNYVTI SILPLCAR+ANL+HG+E HC+ILRR  F + LL
Sbjct: 313 LDRAEESAFLFREMFRSGVEPNYVTIASILPLCARVANLQHGKEFHCYILRRAMFNEHLL 372

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIM 256
           L+NSLV++Y++SGK+ EA+ +FD+M
Sbjct: 373 LWNSLVEMYARSGKVPEAKSVFDLM 397


>gb|EXC31027.1| hypothetical protein L484_021329 [Morus notabilis]
          Length = 683

 Score =  117 bits (294), Expect = 1e-24
 Identities = 52/83 (62%), Positives = 71/83 (85%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR EEA+  FREML  G EPNYVTI SILPLCAR+ANL+HG+E HC+I++R  F + L+
Sbjct: 364 MDRAEEASFFFREMLHSGIEPNYVTIASILPLCARVANLQHGKEFHCYIIKREGFENYLM 423

Query: 182 LYNSLVDLYSKSGKILEAQRLFD 250
           L+N++VD+Y++SGK+LEA+R+FD
Sbjct: 424 LWNAIVDMYARSGKVLEAKRVFD 446


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  117 bits (294), Expect = 1e-24
 Identities = 50/83 (60%), Positives = 71/83 (85%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR+EE   +FREML  G EPNYVTI S+LPLCAR+ANL+HG+E HC+I++ + F + LL
Sbjct: 396 MDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLL 455

Query: 182 LYNSLVDLYSKSGKILEAQRLFD 250
           L+N+LVD+YS+SG++LEA+++FD
Sbjct: 456 LWNALVDMYSRSGRVLEARKVFD 478


>ref|XP_006360760.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Solanum tuberosum]
          Length = 739

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/87 (59%), Positives = 70/87 (80%)
 Frame = +2

Query: 5   DRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLLL 184
           DR EE + +FREML  G EPNY+TI  ILPLCAR+ANL+HG+E HC++ RR  F + LLL
Sbjct: 418 DRSEETSFLFREMLLSGVEPNYITIAGILPLCARVANLQHGKEFHCYLTRREGFEEYLLL 477

Query: 185 YNSLVDLYSKSGKILEAQRLFDIMGVK 265
           +NSLVD+Y++SGK+L A++LF++M  K
Sbjct: 478 WNSLVDMYARSGKVLAARKLFNLMSKK 504


>ref|XP_004247672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Solanum lycopersicum]
          Length = 739

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/87 (59%), Positives = 70/87 (80%)
 Frame = +2

Query: 5   DRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLLL 184
           DR EE + +FREML  G EPNY+TI  ILPLCAR+ANL+HG+E HC++ RR  F + LLL
Sbjct: 418 DRSEETSFLFREMLLSGVEPNYITIAGILPLCARVANLQHGKEFHCYLTRREGFEEYLLL 477

Query: 185 YNSLVDLYSKSGKILEAQRLFDIMGVK 265
           +NSLVD+Y++SGK+L A++LF++M  K
Sbjct: 478 WNSLVDMYARSGKVLAARKLFNLMSKK 504


>ref|XP_006351115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like isoform X1 [Solanum tuberosum]
           gi|565368979|ref|XP_006351116.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like isoform X2 [Solanum tuberosum]
          Length = 737

 Score =  116 bits (290), Expect = 4e-24
 Identities = 52/87 (59%), Positives = 70/87 (80%)
 Frame = +2

Query: 5   DRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLLL 184
           DR EE + +FREML  G EPNY+TI SILPLCAR+ANL+HG+E HC++ RR  F + LLL
Sbjct: 417 DRSEETSFLFREMLLSGVEPNYITIASILPLCARVANLQHGKEFHCYLTRREGFEEHLLL 476

Query: 185 YNSLVDLYSKSGKILEAQRLFDIMGVK 265
           +NSLVD+Y++SGK++ A+ LF++M  K
Sbjct: 477 WNSLVDMYARSGKVVVARNLFNLMSKK 503


>ref|XP_007157004.1| hypothetical protein PHAVU_002G035600g [Phaseolus vulgaris]
           gi|561030419|gb|ESW28998.1| hypothetical protein
           PHAVU_002G035600g [Phaseolus vulgaris]
          Length = 730

 Score =  116 bits (290), Expect = 4e-24
 Identities = 50/88 (56%), Positives = 73/88 (82%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           ++R EE + +FREML  G EPNYVTI S+LPLCAR+ANL+HG+E HC+I++R  F D LL
Sbjct: 403 VNRTEEVSFLFREMLRKGVEPNYVTIASVLPLCARIANLQHGKEFHCYIMKREQFKDYLL 462

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIMGVK 265
           L+N+LVD+Y++SGK+L+A+++FD +  +
Sbjct: 463 LWNALVDMYARSGKVLDARKVFDSLSTR 490


>ref|XP_004301491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Fragaria vesca subsp. vesca]
          Length = 722

 Score =  115 bits (288), Expect = 6e-24
 Identities = 54/88 (61%), Positives = 72/88 (81%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           +DR EEA+ IFREML  G EPN+VTI SIL LCAR+ANL+HG+E HC+I +R  F D L+
Sbjct: 406 MDRAEEASFIFREMLCCGIEPNHVTIASILSLCARVANLQHGKEFHCYITKRVVFGDYLM 465

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIMGVK 265
           L+N+LVD+Y++SGK++EA+R+FD M  K
Sbjct: 466 LWNALVDMYARSGKVVEAKRVFDSMNKK 493


>ref|XP_002890536.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336378|gb|EFH66795.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 687

 Score =  115 bits (287), Expect = 8e-24
 Identities = 50/84 (59%), Positives = 71/84 (84%)
 Frame = +2

Query: 5   DRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLLL 184
           +R EE + + +EML  G+ PNY+T+ SILPLCAR+ANL+HG+E HC+ILRR+S+ D L+L
Sbjct: 387 ERSEETSFLLKEMLLSGFHPNYITLASILPLCARVANLQHGKEFHCYILRRQSYKDCLIL 446

Query: 185 YNSLVDLYSKSGKILEAQRLFDIM 256
           +NSLVD+Y+KSG+I+ A+R+FD M
Sbjct: 447 WNSLVDMYAKSGEIIAAKRVFDSM 470



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/83 (33%), Positives = 50/83 (60%)
 Frame = +2

Query: 8   RFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLLLY 187
           RFEE+ S+++ M++ G +P+  T  S+L  C  + +  +GR +H  +    S   SL + 
Sbjct: 163 RFEESVSVYKRMMSKGIQPDEFTYPSVLKACGALLDFAYGRVVHGSV-EVSSHRCSLYVC 221

Query: 188 NSLVDLYSKSGKILEAQRLFDIM 256
           N+L+ +Y + GK+  A++LFD M
Sbjct: 222 NALISMYKRFGKVDVARKLFDRM 244


>ref|XP_006306895.1| hypothetical protein CARUB_v10008463mg [Capsella rubella]
           gi|482575606|gb|EOA39793.1| hypothetical protein
           CARUB_v10008463mg [Capsella rubella]
          Length = 702

 Score =  112 bits (281), Expect = 4e-23
 Identities = 50/83 (60%), Positives = 70/83 (84%)
 Frame = +2

Query: 8   RFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLLLY 187
           R EE + + R+ML  G+ PNY+T+ SILPLCAR+ANL+HG+E+HC+ILRR+SF D L+L+
Sbjct: 401 RSEETSFLLRKMLLSGFHPNYITLASILPLCARVANLQHGKEIHCYILRRQSFNDCLILW 460

Query: 188 NSLVDLYSKSGKILEAQRLFDIM 256
           NSLVDLY+KSG I+ A++++D M
Sbjct: 461 NSLVDLYAKSGDIIAAKQVYDSM 483


>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
           gi|449481506|ref|XP_004156203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  111 bits (278), Expect = 9e-23
 Identities = 50/82 (60%), Positives = 67/82 (81%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           L R EEA  +FRE+L FG EP+YVT  SILPLCAR+A+L+HGRE HC+I + R F D LL
Sbjct: 395 LGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLL 454

Query: 182 LYNSLVDLYSKSGKILEAQRLF 247
           L+N+LVD+Y+++GK+ EA+R+F
Sbjct: 455 LWNALVDMYARAGKVSEAKRIF 476


>ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71490 gi|12323739|gb|AAG51835.1|AC016163_24 unknown
           protein; 40702-42747 [Arabidopsis thaliana]
           gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis
           thaliana] gi|56790238|gb|AAW30036.1| At1g71490
           [Arabidopsis thaliana] gi|332197086|gb|AEE35207.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 681

 Score =  110 bits (276), Expect = 2e-22
 Identities = 49/85 (57%), Positives = 71/85 (83%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           L++ EEA+ + REML  G++PN +T+ SILPLCAR+ANL+HG+E HC+ILRR+ F D  +
Sbjct: 359 LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIM 256
           L+NSLVD+Y+KSGKI+ A+++ D+M
Sbjct: 419 LWNSLVDVYAKSGKIVAAKQVSDLM 443


>ref|XP_006300817.1| hypothetical protein CARUB_v10019902mg [Capsella rubella]
           gi|482569527|gb|EOA33715.1| hypothetical protein
           CARUB_v10019902mg [Capsella rubella]
          Length = 678

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/85 (58%), Positives = 71/85 (83%)
 Frame = +2

Query: 2   LDRFEEAASIFREMLAFGYEPNYVTIVSILPLCARMANLRHGRELHCHILRRRSFVDSLL 181
           L+R EEA+ + REM+  G++PN VT+ SILPLCAR+ANL+HG+E HC+ILRR+ F D+ +
Sbjct: 359 LNRSEEASYLLREMMIAGFQPNSVTLASILPLCARIANLQHGKEFHCYILRRKCFKDNTM 418

Query: 182 LYNSLVDLYSKSGKILEAQRLFDIM 256
           L+NSLVD+Y+KSGKI+ A+R+ + M
Sbjct: 419 LWNSLVDVYAKSGKIVVAKRVCNFM 443