BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00061576
         (287 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   140   2e-31
ref|XP_006832834.1| hypothetical protein AMTR_s00095p00031150 [A...   137   2e-30
gb|EXB37172.1| hypothetical protein L484_013536 [Morus notabilis]     115   8e-24
ref|XP_002866341.1| pentatricopeptide repeat-containing protein ...    93   3e-17
ref|XP_006400940.1| hypothetical protein EUTSA_v10013206mg [Eutr...    91   2e-16
ref|XP_004961055.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006282115.1| hypothetical protein CARUB_v10028363mg [Caps...    90   3e-16
ref|XP_002320193.2| hypothetical protein POPTR_0014s09270g [Popu...    89   6e-16
ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_006386200.1| pentatricopeptide repeat-containing family p...    87   2e-15
ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfam...    87   2e-15
ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfam...    87   2e-15
ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
gb|AFW79408.1| hypothetical protein ZEAMMB73_086527 [Zea mays]         87   2e-15
ref|NP_200768.1| pentatricopeptide repeat-containing protein [Ar...    87   2e-15
ref|XP_002299253.1| hypothetical protein POPTR_0001s05260g [Popu...    87   3e-15
ref|XP_003637572.1| Pentatricopeptide repeat-containing protein ...    86   7e-15
ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14

>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  140 bits (352), Expect = 2e-31
 Identities = 66/95 (69%), Positives = 77/95 (81%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           D AR+ FEE+EFKDV  WN+MVSGY S G+FK+ALK   DMKL+GVKPD VTWN++I+GY
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           AQ GQ E+AS  F EM GL+D  PNVVSWTALIAG
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/94 (32%), Positives = 55/94 (58%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           + AR+ F  ++  D+V+WN M++GYA  G  ++A++   +MK  G++PD +TWN ++ G+
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIA 5
            Q G   KA+  FF+        PN  + +  +A
Sbjct: 475 TQYGD-GKAALEFFQRMHSMGMDPNTTTISGALA 507


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  140 bits (352), Expect = 2e-31
 Identities = 66/95 (69%), Positives = 77/95 (81%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           D AR+ FEE+EFKDV  WN+MVSGY S G+FK+ALK   DMKL+GVKPD VTWN++I+GY
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           AQ GQ E+AS  F EM GL+D  PNVVSWTALIAG
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/94 (32%), Positives = 55/94 (58%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           + AR+ F  ++  D+V+WN M++GYA  G  ++A++   +MK  G++PD +TWN ++ G+
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIA 5
            Q G   KA+  FF+        PN  + +  +A
Sbjct: 475 TQYGD-GKAALEFFQRMHSMGMDPNTTTISGALA 507


>ref|XP_006832834.1| hypothetical protein AMTR_s00095p00031150 [Amborella trichopoda]
           gi|548837334|gb|ERM98112.1| hypothetical protein
           AMTR_s00095p00031150 [Amborella trichopoda]
          Length = 706

 Score =  137 bits (344), Expect = 2e-30
 Identities = 62/95 (65%), Positives = 81/95 (85%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           D A ++FE+++FKDVV+WNMM+SGYAS GDF++A ++FE+M++AGVKPD VTWNS+I+GY
Sbjct: 308 DIANKIFEKLQFKDVVSWNMMISGYASKGDFQKASEFFENMQIAGVKPDHVTWNSMISGY 367

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           AQ G  EKAS  F +M+ L+D  PNVVSWTALIAG
Sbjct: 368 AQHGDCEKASEYFLKMQRLKDIRPNVVSWTALIAG 402



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 40/95 (42%), Positives = 63/95 (66%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           + AR  F++++ KD+V+WN M+SGYA +G+ ++A K   +M+L GV+PD VTWN +I G+
Sbjct: 481 EIARHNFDKIKKKDIVSWNAMISGYAQSGNKEEASKLLREMQLHGVEPDVVTWNGLITGF 540

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            QKG    A   F+EM G   + PN ++ +  +AG
Sbjct: 541 TQKGDGATALEFFYEM-GKTGNQPNSITISGALAG 574


>gb|EXB37172.1| hypothetical protein L484_013536 [Morus notabilis]
          Length = 634

 Score =  115 bits (287), Expect = 8e-24
 Identities = 55/95 (57%), Positives = 70/95 (73%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           D AR+LFEEM+FKDV  WN+MVSGYA  G+F++AL+Y   MKL+GV PD VTWNS+IAG+
Sbjct: 208 DIARRLFEEMKFKDVFMWNIMVSGYAIKGEFRKALRYINAMKLSGVMPDRVTWNSLIAGF 267

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            Q  +L  A     E+   ED  P+VVSWTA+I+G
Sbjct: 268 IQNRRLNVAFKYLSELSDSEDYSPDVVSWTAVISG 302



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/75 (40%), Positives = 47/75 (62%)
 Frame = -2

Query: 283 YARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYA 104
           +ARQ F+ +  KD+++WN M+SGYA  G +++ ++   +MK  GVK D VTWN +I G+ 
Sbjct: 382 FARQKFDNIIQKDLISWNSMLSGYALGGCYEEVVRILSEMKARGVKSDIVTWNGLITGFT 441

Query: 103 QKGQLEKASNCFFEM 59
           Q G  + A    + M
Sbjct: 442 QTGDGKSALEFLYRM 456


>ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312176|gb|EFH42600.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 534

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/93 (45%), Positives = 67/93 (72%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           AR++F+++  +D+V +N M+SGYA+N    +AL   +DMKL G+KPD +TWN++I+G++ 
Sbjct: 171 ARKVFDDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDIITWNALISGFSH 230

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            G  EK S    E+  L+  MP+VVSWT++I+G
Sbjct: 231 MGNEEKVSE-ILELMCLDGYMPDVVSWTSIISG 262



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
 Frame = -2

Query: 286 DYARQLFEEMEF----KDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           D A  L ++M+      D++TWN ++SG++  G+ ++  +  E M L G  PD V+W S+
Sbjct: 200 DEALNLVKDMKLLGIKPDIITWNALISGFSHMGNEEKVSEILELMCLDGYMPDVVSWTSI 259

Query: 118 IAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALI 8
           I+G     Q EKA + F +M       PN  + T L+
Sbjct: 260 ISGLVHNFQNEKAFDAFKQML-THGLYPNSATITTLL 295


>ref|XP_006400940.1| hypothetical protein EUTSA_v10013206mg [Eutrema salsugineum]
           gi|557102030|gb|ESQ42393.1| hypothetical protein
           EUTSA_v10013206mg [Eutrema salsugineum]
          Length = 536

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/93 (44%), Positives = 64/93 (68%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           AR++F ++  +D+  +N M+SGYA+N    +AL   +DMKL G+KPD +TWN++IAG++ 
Sbjct: 171 ARKVFNDLAEQDLAVFNAMISGYANNSQSDEALNLVQDMKLLGIKPDIITWNALIAGFSH 230

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            G  EK S    E+  L+   P+VVSWT++I+G
Sbjct: 231 MGNEEKVSE-ILEIMCLDGHKPDVVSWTSIISG 262



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = -2

Query: 286 DYARQLFEEMEF----KDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           D A  L ++M+      D++TWN +++G++  G+ ++  +  E M L G KPD V+W S+
Sbjct: 200 DEALNLVQDMKLLGIKPDIITWNALIAGFSHMGNEEKVSEILEIMCLDGHKPDVVSWTSI 259

Query: 118 IAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALI 8
           I+G     Q EKA + F +M       PN  + T L+
Sbjct: 260 ISGLVHNFQNEKALDGFKQMLA-HGLYPNSATITTLL 295


>ref|XP_004961055.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Setaria italica]
          Length = 857

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/95 (43%), Positives = 64/95 (67%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           DYA+++F+ +E +++ TWN +V+GYA+ G F  +LK  E+MK+  + PD  TWNS+I GY
Sbjct: 365 DYAKKVFDALELRNMTTWNSLVAGYANAGQFDNSLKLVEEMKMNRLDPDITTWNSLITGY 424

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           +  G   +A     ++K +    PNVVSWT+LI+G
Sbjct: 425 SMNGLSSQAVLLLRQVKAI-GLTPNVVSWTSLISG 458



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = -2

Query: 286 DYARQLFEEMEFK----DVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           D + +L EEM+      D+ TWN +++GY+ NG   QA+     +K  G+ P+ V+W S+
Sbjct: 396 DNSLKLVEEMKMNRLDPDITTWNSLITGYSMNGLSSQAVLLLRQVKAIGLTPNVVSWTSL 455

Query: 118 IAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALI 8
           I+G    G  E +   F EM+  +D  P++V+ + L+
Sbjct: 456 ISGSCNNGDYEDSFYFFNEMQ-KDDVQPSLVTMSVLL 491


>ref|XP_006282115.1| hypothetical protein CARUB_v10028363mg [Capsella rubella]
           gi|482550819|gb|EOA15013.1| hypothetical protein
           CARUB_v10028363mg [Capsella rubella]
          Length = 534

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/93 (44%), Positives = 65/93 (69%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           A+++F+++   D+V +N M+SGYA+N    +AL   +DMKL G+KPD +TWN++++G+A 
Sbjct: 171 AKKVFDDLGEHDLVVFNAMISGYANNRQSDEALSLIKDMKLLGIKPDIITWNALLSGFAH 230

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            G  E+ S    EM  LE   P+VVSWT++I+G
Sbjct: 231 TGNEEQVSE-ILEMMCLEGHKPDVVSWTSIISG 262



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
 Frame = -2

Query: 286 DYARQLFEEMEF----KDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           D A  L ++M+      D++TWN ++SG+A  G+ +Q  +  E M L G KPD V+W S+
Sbjct: 200 DEALSLIKDMKLLGIKPDIITWNALLSGFAHTGNEEQVSEILEMMCLEGHKPDVVSWTSI 259

Query: 118 IAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALI 8
           I+G     Q  KA + F +M       PN  + T L+
Sbjct: 260 ISGLVHNFQNGKAFDAFKQML-THGLYPNSATITTLL 295


>ref|XP_002320193.2| hypothetical protein POPTR_0014s09270g [Populus trichocarpa]
           gi|550323819|gb|EEE98508.2| hypothetical protein
           POPTR_0014s09270g [Populus trichocarpa]
          Length = 860

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 39/93 (41%), Positives = 62/93 (66%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           ++ +F+ M+ K++V WN ++SGY+  G F  A +    MK  G+KPD +TWNS++AGY+ 
Sbjct: 373 SQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLITWNSLVAGYSM 432

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           +G  ++A     ++K +    PNVVSWTALI+G
Sbjct: 433 RGHTKEALALIHDIK-ISGLTPNVVSWTALISG 464



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 31/97 (31%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
 Frame = -2

Query: 286 DYARQLFEEMEFK----DVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           D+A++L   M+ +    D++TWN +V+GY+  G  K+AL    D+K++G+ P+ V+W ++
Sbjct: 402 DHAKRLLNRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTAL 461

Query: 118 IAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALI 8
           I+G +Q G   ++   F +M+  E   PN  + ++L+
Sbjct: 462 ISGCSQNGNYSESIEAFVQMQE-EGIKPNSATISSLL 497


>ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Glycine max]
          Length = 604

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 42/94 (44%), Positives = 62/94 (65%)
 Frame = -2

Query: 283 YARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYA 104
           YAR+LF+ M  +DV +W  M+ G+ + G+ +QAL  FE M+L G++P+  TWN++IA YA
Sbjct: 166 YARRLFDGMRERDVASWTSMICGFCNVGEIEQALMLFERMRLEGLEPNDFTWNAIIAAYA 225

Query: 103 QKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           +     KA   FFE    E  +P+VV+W ALI+G
Sbjct: 226 RSSDSRKAFG-FFERMKREGVVPDVVAWNALISG 258



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDV----VTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           + A  LFE M  + +     TWN +++ YA + D ++A  +FE MK  GV PD V WN++
Sbjct: 196 EQALMLFERMRLEGLEPNDFTWNAIIAAYARSSDSRKAFGFFERMKREGVVPDVVAWNAL 255

Query: 118 IAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALI 8
           I+G+ Q  Q+ +A   F+EM  L    PN V+  AL+
Sbjct: 256 ISGFVQNHQVREAFKMFWEMI-LSRIQPNQVTVVALL 291


>ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cicer arietinum]
          Length = 548

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/94 (45%), Positives = 64/94 (68%)
 Frame = -2

Query: 283 YARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYA 104
           YA ++FEEM  +DV +W  M+ G+ + GD +QAL  FE MKL G++P+  TWN++IA YA
Sbjct: 166 YACRVFEEMPERDVASWTSMICGFCNVGDIEQALVLFERMKLEGLEPNDFTWNAIIAMYA 225

Query: 103 QKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           + G  +KA + F E    E  +P++V+W ALI+G
Sbjct: 226 RLGDSKKAFS-FMEKMKKEGFLPDLVAWNALISG 258



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDV----VTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           + A  LFE M+ + +     TWN +++ YA  GD K+A  + E MK  G  PD V WN++
Sbjct: 196 EQALVLFERMKLEGLEPNDFTWNAIIAMYARLGDSKKAFSFMEKMKKEGFLPDLVAWNAL 255

Query: 118 IAGYAQKGQLEKASNCFFEM 59
           I+G+ Q  Q  +A N F EM
Sbjct: 256 ISGFVQNHQFSEAFNLFREM 275


>ref|XP_006386200.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344175|gb|ERP63997.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 810

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/93 (45%), Positives = 62/93 (66%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           AR+ FE M+ +D+V WN M+SGY   G+ ++A + F+ M   G++P  VTWN +IAGY Q
Sbjct: 151 ARRFFESMDERDIVAWNAMMSGYCLKGEVEEAHRLFDAMCEEGIEPGLVTWNILIAGYNQ 210

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           KGQ + A N   +M     S P+VV+WT++I+G
Sbjct: 211 KGQCDVAMNLMKKMVSFGVS-PDVVAWTSMISG 242



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           A+ +F+ M  KD+ TWN M+ GY   G   +A   F  M+ + V+P+ VTWN++I+GY Q
Sbjct: 322 AQLVFDLMSEKDLYTWNSMIGGYCQAGYCGKAYVLFTKMQKSQVQPNVVTWNTMISGYIQ 381

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            G  ++A + F  M+   +   +  SW +LIAG
Sbjct: 382 SGDEDQAMDLFHRMEKEGEIKRDNASWNSLIAG 414



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = -2

Query: 247 DVVTWNMMVSGYASNGDFKQALKYFEDMKLAG-VKPDCVTWNSVIAGYAQKGQLEKASNC 71
           +VVTWN M+SGY  +GD  QA+  F  M+  G +K D  +WNS+IAG+ Q  + +KA   
Sbjct: 368 NVVTWNTMISGYIQSGDEDQAMDLFHRMEKEGEIKRDNASWNSLIAGFMQIRKKDKALGI 427

Query: 70  FFEMKGLEDSMPNVVSWTALI 8
           F +M+    S PN V+  +++
Sbjct: 428 FRQMQSFCIS-PNPVTILSML 447


>ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508783667|gb|EOY30923.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 779

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 42/95 (44%), Positives = 59/95 (62%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           D ARQ+F     KDV+ WN +++ YA  G   +ALK F  M+L GV P+  +WNSVI G+
Sbjct: 380 DCARQVFSSTTNKDVILWNTLLASYADVGHSGEALKLFYQMQLQGVPPNVTSWNSVILGF 439

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            +  QL +A   F +M+ L D  PN+++WT LI G
Sbjct: 440 IRNHQLNEAKELFLQMQSL-DVHPNLITWTTLITG 473



 Score = 53.1 bits (126), Expect(2) = 8e-06
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           A  +F  M  KDVVTWN+M+S Y   G  ++AL     M+L  ++ DCVT +S++   A 
Sbjct: 281 AELVFVRMLVKDVVTWNLMISSYVRCGLIEKALNMCHLMRLENLRFDCVTLSSILTAAAN 340

Query: 100 KGQLE--KASNCFFEMKGLEDSM 38
              +E  K  +C+     L+  +
Sbjct: 341 SSSIEIGKEGHCYCIRNNLQSDV 363



 Score = 21.9 bits (45), Expect(2) = 8e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 41  YAKCGVLDC 15
           YAKCG +DC
Sbjct: 373 YAKCGRIDC 381


>ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508783666|gb|EOY30922.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 836

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 42/95 (44%), Positives = 59/95 (62%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           D ARQ+F     KDV+ WN +++ YA  G   +ALK F  M+L GV P+  +WNSVI G+
Sbjct: 437 DCARQVFSSTTNKDVILWNTLLASYADVGHSGEALKLFYQMQLQGVPPNVTSWNSVILGF 496

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            +  QL +A   F +M+ L D  PN+++WT LI G
Sbjct: 497 IRNHQLNEAKELFLQMQSL-DVHPNLITWTTLITG 530



 Score = 53.1 bits (126), Expect(2) = 8e-06
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           A  +F  M  KDVVTWN+M+S Y   G  ++AL     M+L  ++ DCVT +S++   A 
Sbjct: 338 AELVFVRMLVKDVVTWNLMISSYVRCGLIEKALNMCHLMRLENLRFDCVTLSSILTAAAN 397

Query: 100 KGQLE--KASNCFFEMKGLEDSM 38
              +E  K  +C+     L+  +
Sbjct: 398 SSSIEIGKEGHCYCIRNNLQSDV 420



 Score = 21.9 bits (45), Expect(2) = 8e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 41  YAKCGVLDC 15
           YAKCG +DC
Sbjct: 430 YAKCGRIDC 438


>ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
           gi|449496662|ref|XP_004160192.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
          Length = 547

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/95 (46%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           AR++FE M  KD+V  N MVSGYA +G  ++AL   E+M++ G+KP+ VTWN+++ G++Q
Sbjct: 183 ARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQ 242

Query: 100 KGQLEKASNCFFEMK--GLEDSMPNVVSWTALIAG 2
            G+ E     F EM+  G+E   P+VVSWT++I+G
Sbjct: 243 IGEEEMVRELFKEMEANGIE---PDVVSWTSVISG 274



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
 Frame = -2

Query: 280 ARQLFEEMEF----KDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIA 113
           A  L EEM+      ++VTWN +V+G++  G+ +   + F++M+  G++PD V+W SVI+
Sbjct: 214 ALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSVIS 273

Query: 112 GYAQKGQLEKASNCFFEM 59
           G+ Q  + E+A + F  M
Sbjct: 274 GFVQNFRNEEAFDTFRRM 291


>gb|AFW79408.1| hypothetical protein ZEAMMB73_086527 [Zea mays]
          Length = 865

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 39/95 (41%), Positives = 63/95 (66%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           +YA+++F+ +E +++ TWN +V+GY++ G F  AL   E+MK   + PD  TWN +I+GY
Sbjct: 364 EYAQKVFDTLELRNITTWNSLVAGYSNAGQFDHALDLVEEMKRNRLDPDITTWNGLISGY 423

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           +  G+  +A     +MK +    PNVVSWT+LI+G
Sbjct: 424 SMNGRSSQAVLLLRQMKAI-GLTPNVVSWTSLISG 457



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
 Frame = -2

Query: 286 DYARQLFEEMEFK----DVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSV 119
           D+A  L EEM+      D+ TWN ++SGY+ NG   QA+     MK  G+ P+ V+W S+
Sbjct: 395 DHALDLVEEMKRNRLDPDITTWNGLISGYSMNGRSSQAVLLLRQMKAIGLTPNVVSWTSL 454

Query: 118 IAGYAQKGQLEKASNCFFEMKGLEDSMPNVVSWTALI 8
           I+G    G  E +   F EM+  +   P+VV+ + L+
Sbjct: 455 ISGSCHNGDYEDSFYFFNEMQ-KDHVQPSVVTMSVLL 490


>ref|NP_200768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170472|sp|Q9FGR2.1|PP436_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g59600 gi|10177776|dbj|BAB11040.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|71143062|gb|AAZ23922.1| At5g59600 [Arabidopsis
           thaliana] gi|332009827|gb|AED97210.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 534

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/93 (43%), Positives = 64/93 (68%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           AR++F ++  +D+V +N M+SGYA+N    +AL   +DMKL G+KPD +TWN++I+G++ 
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
               EK S    E+  L+   P+VVSWT++I+G
Sbjct: 231 MRNEEKVSE-ILELMCLDGYKPDVVSWTSIISG 262


>ref|XP_002299253.1| hypothetical protein POPTR_0001s05260g [Populus trichocarpa]
           gi|222846511|gb|EEE84058.1| hypothetical protein
           POPTR_0001s05260g [Populus trichocarpa]
          Length = 599

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/94 (42%), Positives = 65/94 (69%)
 Frame = -2

Query: 283 YARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYA 104
           YAR +F+ M  +D+V+W  M+SGY + G  ++AL  FE MKL G++P+  TWN++I+GYA
Sbjct: 179 YARTVFDRMAKRDIVSWTSMISGYCNVGKIEEALVLFERMKLEGLEPNDFTWNALISGYA 238

Query: 103 QKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
           ++G  + A +   +M   E  +P++V+W A+IAG
Sbjct: 239 RRGDSDGAFSLLSKMT-REGLVPDLVTWNAMIAG 271


>ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503507|gb|AES84710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 833

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 44/92 (47%), Positives = 62/92 (67%)
 Frame = -2

Query: 280 ARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGYAQ 101
           A ++FE M FKDVVTWN MV+GY+ NG F+ AL  F  M+   ++ D VTW+SVI+GYAQ
Sbjct: 285 ANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQ 344

Query: 100 KGQLEKASNCFFEMKGLEDSMPNVVSWTALIA 5
           +G   +A + F +M G     PNVV+  +L++
Sbjct: 345 RGFGCEAMDVFRQMCGCR-CRPNVVTLMSLLS 375


>ref|XP_006475767.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 622

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 37/95 (38%), Positives = 62/95 (65%)
 Frame = -2

Query: 286 DYARQLFEEMEFKDVVTWNMMVSGYASNGDFKQALKYFEDMKLAGVKPDCVTWNSVIAGY 107
           D A+Q+F  +  +DVV WN +++ YA  G   +A + F  M+L G+ P+ ++WNSVI G+
Sbjct: 436 DNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGF 495

Query: 106 AQKGQLEKASNCFFEMKGLEDSMPNVVSWTALIAG 2
            + GQ+ +A + F +M+ L    PN+++WT LI+G
Sbjct: 496 LRNGQMNEAKDMFLQMQSL-GVQPNLITWTTLISG 529