BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00060601
         (268 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,...    97   3e-18
ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_004303560.1| PREDICTED: pentatricopeptide repeat-containi...    95   9e-18
ref|XP_007216664.1| hypothetical protein PRUPE_ppb017187mg [Prun...    95   9e-18
ref|XP_006413152.1| hypothetical protein EUTSA_v10024897mg [Eutr...    94   2e-17
ref|XP_007049326.1| Tetratricopeptide repeat (TPR)-like superfam...    92   6e-17
ref|XP_006285690.1| hypothetical protein CARUB_v10007160mg [Caps...    92   6e-17
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar...    92   8e-17
ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containi...    90   3e-16
ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citr...    90   3e-16
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ...    90   3e-16
ref|XP_002320514.2| hypothetical protein POPTR_0014s16390g [Popu...    89   5e-16
ref|XP_006843235.1| hypothetical protein AMTR_s00080p00074320 [A...    89   5e-16
ref|XP_006362997.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
gb|EYU22660.1| hypothetical protein MIMGU_mgv1a024981mg [Mimulus...    76   6e-12
gb|EPS73698.1| hypothetical protein M569_01057 [Genlisea aurea]        74   3e-11
ref|XP_003625044.1| Pentatricopeptide repeat-containing protein ...    74   3e-11
ref|XP_004510327.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11

>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 46/72 (63%), Positives = 58/72 (80%)
 Frame = -3

Query: 263 CHSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVF 84
           C +L+T+S+ILHILTK  KFK AES+LK  +    +D P KLFEAILY+YR+CDSSPCVF
Sbjct: 188 CQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVF 247

Query: 83  DCLFKTYAFIRQ 48
           D LFKTYA +++
Sbjct: 248 DSLFKTYAQMKK 259


>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           H+L+THS+ILHILTK +KFK AE ILKS ++   +D P KLFEAILY+YR+CDSSP VFD
Sbjct: 91  HTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFD 150

Query: 80  CLFKTYAFIRQ 48
            LFKT A +++
Sbjct: 151 SLFKTLAHMKK 161


>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
           gi|449528063|ref|XP_004171026.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 45/71 (63%), Positives = 58/71 (81%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           H+L+TH +ILHILTK +KFK AESIL+S I    +D P KLFE++LY+YRLCDSSP VFD
Sbjct: 113 HTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFD 172

Query: 80  CLFKTYAFIRQ 48
            LFKT+A +++
Sbjct: 173 LLFKTFAHLKK 183


>ref|XP_004303560.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 539

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/70 (64%), Positives = 58/70 (82%)
 Frame = -3

Query: 257 SLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFDC 78
           +L+THS+ILHILTK +KFK AESIL+  ++P  +D P KLFEAILY+YR CDSSP VFD 
Sbjct: 114 TLETHSMILHILTKYRKFKSAESILRKILVPGNIDLPSKLFEAILYSYRSCDSSPRVFDS 173

Query: 77  LFKTYAFIRQ 48
           LFKT+A +++
Sbjct: 174 LFKTFAHMKK 183


>ref|XP_007216664.1| hypothetical protein PRUPE_ppb017187mg [Prunus persica]
           gi|462412814|gb|EMJ17863.1| hypothetical protein
           PRUPE_ppb017187mg [Prunus persica]
          Length = 533

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 45/70 (64%), Positives = 58/70 (82%)
 Frame = -3

Query: 257 SLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFDC 78
           +L+THS+ILHILTK +KFK AESIL+  ++   +D P KLFEAILY+YRLCDSSP VFD 
Sbjct: 114 TLETHSMILHILTKYRKFKSAESILRKVLVSGSIDLPSKLFEAILYSYRLCDSSPRVFDS 173

Query: 77  LFKTYAFIRQ 48
           LFKT+A +++
Sbjct: 174 LFKTFAHMKK 183


>ref|XP_006413152.1| hypothetical protein EUTSA_v10024897mg [Eutrema salsugineum]
           gi|557114322|gb|ESQ54605.1| hypothetical protein
           EUTSA_v10024897mg [Eutrema salsugineum]
          Length = 528

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 42/73 (57%), Positives = 58/73 (79%)
 Frame = -3

Query: 266 GCHSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCV 87
           G HSL+TH+++LH LTK +KFK AESIL+  ++   LD P KLF+A+LY+YR CDS+P V
Sbjct: 118 GSHSLETHAIVLHTLTKNRKFKSAESILRDILVTGGLDLPAKLFDALLYSYRECDSTPRV 177

Query: 86  FDCLFKTYAFIRQ 48
           FD LFKT+A +++
Sbjct: 178 FDSLFKTFAHLKK 190


>ref|XP_007049326.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508701587|gb|EOX93483.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 532

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 46/79 (58%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           HSL+T S+ILHILT+ +KFK AES+L++ I    L+ P KLF++ILY+YR+CDSSP VFD
Sbjct: 109 HSLETRSMILHILTRNQKFKSAESVLRTIIASGSLELPAKLFDSILYSYRICDSSPRVFD 168

Query: 80  CLFKTYAFIR--QKTSVAF 30
            LFKTYA  +  +  +VAF
Sbjct: 169 LLFKTYAHTKKFRNATVAF 187


>ref|XP_006285690.1| hypothetical protein CARUB_v10007160mg [Capsella rubella]
           gi|482554395|gb|EOA18588.1| hypothetical protein
           CARUB_v10007160mg [Capsella rubella]
          Length = 513

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 40/71 (56%), Positives = 57/71 (80%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           HSL+TH+++LH LTK +KFK AESIL+  ++   +D P K+FEA+LY+YR CDS+P VFD
Sbjct: 105 HSLETHAIVLHTLTKNRKFKSAESILRDVLVNGAVDLPAKVFEALLYSYRECDSTPRVFD 164

Query: 80  CLFKTYAFIRQ 48
            LFKT+A +++
Sbjct: 165 SLFKTFAHLKK 175


>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334186944|ref|NP_001190849.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
           gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
           thaliana] gi|7269520|emb|CAB79523.1| putative protein
           [Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 40/73 (54%), Positives = 58/73 (79%)
 Frame = -3

Query: 266 GCHSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCV 87
           G HSL+TH+++LH LTK +KFK AESIL+  ++   +D P K+F+A+LY+YR CDS+P V
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170

Query: 86  FDCLFKTYAFIRQ 48
           FD LFKT+A +++
Sbjct: 171 FDSLFKTFAHLKK 183


>ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568830409|ref|XP_006469493.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|568830411|ref|XP_006469494.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform X3 [Citrus sinensis]
          Length = 565

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/66 (62%), Positives = 53/66 (80%)
 Frame = -3

Query: 257 SLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFDC 78
           +L+THS++LHILTK +KFK +ESIL+  +     D P KLF++ILY+YR+CDSSP VFD 
Sbjct: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198

Query: 77  LFKTYA 60
           LFKTYA
Sbjct: 199 LFKTYA 204


>ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citrus clementina]
           gi|557550383|gb|ESR61012.1| hypothetical protein
           CICLE_v10018243mg [Citrus clementina]
          Length = 565

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/66 (62%), Positives = 53/66 (80%)
 Frame = -3

Query: 257 SLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFDC 78
           +L+THS++LHILTK +KFK +ESIL+  +     D P KLF++ILY+YR+CDSSP VFD 
Sbjct: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198

Query: 77  LFKTYA 60
           LFKTYA
Sbjct: 199 LFKTYA 204


>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315433|gb|EFH45856.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 538

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 39/71 (54%), Positives = 57/71 (80%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           HSL+TH+++LH LTK +KFK AESIL+  ++   +D P K+F+A+LY+YR CDS+P VFD
Sbjct: 113 HSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFD 172

Query: 80  CLFKTYAFIRQ 48
            LFKT+A +++
Sbjct: 173 SLFKTFAHLKK 183


>ref|XP_002320514.2| hypothetical protein POPTR_0014s16390g [Populus trichocarpa]
           gi|550324329|gb|EEE98829.2| hypothetical protein
           POPTR_0014s16390g [Populus trichocarpa]
          Length = 506

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 40/70 (57%), Positives = 57/70 (81%)
 Frame = -3

Query: 257 SLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFDC 78
           +L+THS+ILHILTK+ KFK A+SIL++ +  + +D P KLF+ +L++YR+CDSSP VFD 
Sbjct: 83  TLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRMCDSSPRVFDS 142

Query: 77  LFKTYAFIRQ 48
           LFKTYA + +
Sbjct: 143 LFKTYAHMNK 152


>ref|XP_006843235.1| hypothetical protein AMTR_s00080p00074320 [Amborella trichopoda]
           gi|548845519|gb|ERN04910.1| hypothetical protein
           AMTR_s00080p00074320 [Amborella trichopoda]
          Length = 489

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 42/66 (63%), Positives = 55/66 (83%)
 Frame = -3

Query: 257 SLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFDC 78
           +L+THS+ILHILTK +KF+ AE++LK +IIPK LDS   LF++++ TYRLC+SS  VFD 
Sbjct: 69  TLETHSIILHILTKSRKFRSAEALLKKSIIPKCLDSSSDLFDSLVSTYRLCNSSHRVFDA 128

Query: 77  LFKTYA 60
           LFKTYA
Sbjct: 129 LFKTYA 134


>ref|XP_006362997.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Solanum tuberosum]
          Length = 530

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/71 (54%), Positives = 56/71 (78%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           ++L+ HS++LH+LTK KKFK AESIL+  ++   +D P KLFEAI+ +YR+CDSSP VFD
Sbjct: 112 NTLENHSIVLHVLTKSKKFKSAESILRKLLVSGSVDFPGKLFEAIVLSYRMCDSSPRVFD 171

Query: 80  CLFKTYAFIRQ 48
            LFK +A +++
Sbjct: 172 SLFKCHAHLKK 182


>ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Solanum lycopersicum]
          Length = 530

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           ++L+ HS++LH+LTK KKFK AESIL+  +    +D P KLFEAIL +YR+CDSSP VFD
Sbjct: 112 NTLENHSIVLHVLTKSKKFKSAESILRKLLESGSVDFPGKLFEAILLSYRICDSSPRVFD 171

Query: 80  CLFKTYAFIRQ 48
            LFK +A +++
Sbjct: 172 SLFKCHAHLKK 182


>gb|EYU22660.1| hypothetical protein MIMGU_mgv1a024981mg [Mimulus guttatus]
          Length = 486

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKV-----LDSPLKLFEAILYTYRLCDSS 96
           ++LD  S+ILHILTK +KFK AESIL+ TI  +      LD   ++FEA++Y+YR+C+SS
Sbjct: 68  NTLDVVSIILHILTKNRKFKSAESILRRTIETRGGGVSDLDFTRRVFEALVYSYRMCESS 127

Query: 95  PCVFDCLFKTYAFIRQ 48
           P  FD LFKT+A + +
Sbjct: 128 PRAFDSLFKTHAHMNK 143


>gb|EPS73698.1| hypothetical protein M569_01057 [Genlisea aurea]
          Length = 500

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -3

Query: 257 SLDTHSVILHILTKEKKFKVAESILKSTIIPKV--LDSPLKLFEAILYTYRLCDSSPCVF 84
           +LD + + LHILTK +KF  A+SI+K T+      LD P KLF+ ++Y+YR+CDSS  VF
Sbjct: 111 TLDVNCIALHILTKYRKFISAQSIIKKTLSDASIDLDFPRKLFDGLVYSYRMCDSSSLVF 170

Query: 83  DCLFKTYAFIRQ 48
           D LFKT+A +++
Sbjct: 171 DALFKTHAHMKK 182


>ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500059|gb|AES81262.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 521

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/71 (49%), Positives = 50/71 (70%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           H+L THS +LHILTK + FK A+SI       K++ +   LFE++L++Y LC+SSP VFD
Sbjct: 100 HTLHTHSFLLHILTKNRNFKTAQSIFS-----KIITTNSNLFESLLHSYTLCNSSPLVFD 154

Query: 80  CLFKTYAFIRQ 48
            LFKT+A + +
Sbjct: 155 TLFKTFAHMNK 165


>ref|XP_004510327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cicer arietinum]
          Length = 515

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 36/67 (53%), Positives = 46/67 (68%)
 Frame = -3

Query: 260 HSLDTHSVILHILTKEKKFKVAESILKSTIIPKVLDSPLKLFEAILYTYRLCDSSPCVFD 81
           H+L THS ILHILTK + F+ ++SI    I          LFEA+L++YRLC+SSP VFD
Sbjct: 98  HTLQTHSFILHILTKNRNFRTSQSIFSKIITDS------NLFEALLHSYRLCNSSPLVFD 151

Query: 80  CLFKTYA 60
            LFKT+A
Sbjct: 152 TLFKTFA 158