BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00060553
         (275 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps...   131   9e-29
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   131   1e-28
ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat...   131   1e-28
gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]        130   2e-28
ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   127   2e-27
emb|CBI31172.3| unnamed protein product [Vitis vinifera]              127   2e-27
ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar...   125   5e-27
ref|XP_006369200.1| hypothetical protein POPTR_0001s18710g [Popu...   123   2e-26
ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutr...   123   3e-26
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   122   7e-26
gb|EXC01816.1| hypothetical protein L484_021456 [Morus notabilis]     117   2e-24
ref|XP_006354473.1| PREDICTED: putative pentatricopeptide repeat...   115   8e-24
ref|XP_006491705.1| PREDICTED: putative pentatricopeptide repeat...   114   1e-23
ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citr...   114   1e-23
ref|XP_004247740.1| PREDICTED: putative pentatricopeptide repeat...   114   1e-23
ref|XP_007029874.1| Tetratricopeptide repeat (TPR)-like superfam...   112   7e-23
ref|XP_007225005.1| hypothetical protein PRUPE_ppa020300mg [Prun...   112   7e-23
ref|XP_006857330.1| hypothetical protein AMTR_s00067p00084570 [A...   109   3e-22
ref|XP_002528839.1| pentatricopeptide repeat-containing protein,...   108   6e-22
gb|EYU32564.1| hypothetical protein MIMGU_mgv1a002438mg [Mimulus...   100   2e-19

>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
           gi|482565768|gb|EOA29957.1| hypothetical protein
           CARUB_v10013060mg [Capsella rubella]
          Length = 730

 Score =  131 bits (330), Expect = 9e-29
 Identities = 58/87 (66%), Positives = 75/87 (86%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS+IRC+T   LF ++L SF+ MRASG+ PDH+VFPSV+KSCT +MDL+LG+S+HGCI+R
Sbjct: 74  KSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRLGESVHGCIVR 133

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGKEV 13
           LG+D DLYTGNALMNMY+KL  MG ++
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKI 160


>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  131 bits (329), Expect = 1e-28
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS+IRCYTS GL +QSL SFIGM ASG YPDH+VFPSV+KSC  LMDL LG+S+HG IIR
Sbjct: 75  KSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIR 134

Query: 93  LGLDFDLYTGNALMNMYSKLQ 31
           +GLDFDLYTGNALMNMYSKL+
Sbjct: 135 VGLDFDLYTGNALMNMYSKLR 155


>ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  131 bits (329), Expect = 1e-28
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS+IRCYTS GL +QSL SFIGM ASG YPDH+VFPSV+KSC  LMDL LG+S+HG IIR
Sbjct: 75  KSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIR 134

Query: 93  LGLDFDLYTGNALMNMYSKLQ 31
           +GLDFDLYTGNALMNMYSKL+
Sbjct: 135 VGLDFDLYTGNALMNMYSKLR 155


>gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  130 bits (326), Expect = 2e-28
 Identities = 63/85 (74%), Positives = 74/85 (87%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS+IRCYTS GL ++SL SFIGM ASG YPDH+VFPSV+K+C  LMDL LG+S+HG IIR
Sbjct: 77  KSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIR 136

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGK 19
           +GLDFDLYTGNALMNMYSKL+ + K
Sbjct: 137 VGLDFDLYTGNALMNMYSKLRFLKK 161


>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/83 (73%), Positives = 69/83 (83%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSIIRCYTS GLF  SL  FI M ASGKYPDH+VFPSV+KSCT + DL+ G+S+HGCIIR
Sbjct: 75  KSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIR 134

Query: 93  LGLDFDLYTGNALMNMYSKLQSM 25
           LG+ FDLYT NALMNMYSK  S+
Sbjct: 135 LGMGFDLYTCNALMNMYSKFWSL 157


>emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/83 (73%), Positives = 69/83 (83%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSIIRCYTS GLF  SL  FI M ASGKYPDH+VFPSV+KSCT + DL+ G+S+HGCIIR
Sbjct: 75  KSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIR 134

Query: 93  LGLDFDLYTGNALMNMYSKLQSM 25
           LG+ FDLYT NALMNMYSK  S+
Sbjct: 135 LGMGFDLYTCNALMNMYSKFWSL 157


>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643232|gb|AEE76753.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  125 bits (315), Expect = 5e-27
 Identities = 56/87 (64%), Positives = 73/87 (83%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS+IRC+T   LF ++L SF+ MRASG+ PDH+VFPSV+KSCT +MDL+ G+S+HG I+R
Sbjct: 74  KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGKEV 13
           LG+D DLYTGNALMNMY+KL  MG ++
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKI 160


>ref|XP_006369200.1| hypothetical protein POPTR_0001s18710g [Populus trichocarpa]
           gi|550347631|gb|ERP65769.1| hypothetical protein
           POPTR_0001s18710g [Populus trichocarpa]
          Length = 572

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/85 (69%), Positives = 68/85 (80%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSIIRCY + GL  QS+  F+ MRASGK PDH VFPS++KSC  L DLKLG+SIHGCIIR
Sbjct: 73  KSIIRCYVANGLLVQSVALFLQMRASGKKPDHHVFPSLLKSCALLSDLKLGESIHGCIIR 132

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGK 19
           LG+DFDLYT NALMNMY K Q + +
Sbjct: 133 LGMDFDLYTCNALMNMYGKFQKVDR 157


>ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutrema salsugineum]
           gi|557107185|gb|ESQ47492.1| hypothetical protein
           EUTSA_v10020184mg [Eutrema salsugineum]
          Length = 694

 Score =  123 bits (308), Expect = 3e-26
 Identities = 55/87 (63%), Positives = 72/87 (82%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS+IRC+T   LF ++L SF+ MRASG+ PDH+VFPSV+KSCT + DL+LG+S+HGCI+R
Sbjct: 74  KSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMTDLRLGESVHGCILR 133

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGKEV 13
           LG+D DLYT NALMNMY+KL  M  ++
Sbjct: 134 LGMDCDLYTCNALMNMYAKLLGMSSKI 160


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329263|gb|EFH59682.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 679

 Score =  122 bits (305), Expect = 7e-26
 Identities = 55/80 (68%), Positives = 69/80 (86%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS+IRC+T   LF ++L SF+ MRASG+ PDH+VFPSV+KSCT +MDL+ G+S+HG I+R
Sbjct: 74  KSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133

Query: 93  LGLDFDLYTGNALMNMYSKL 34
           LG+D DLYTGNALMNMYSKL
Sbjct: 134 LGMDCDLYTGNALMNMYSKL 153


>gb|EXC01816.1| hypothetical protein L484_021456 [Morus notabilis]
          Length = 709

 Score =  117 bits (293), Expect = 2e-24
 Identities = 57/86 (66%), Positives = 68/86 (79%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSIIR YTS GLF QS+ SF+ MRA   YPDH++FPSVVKSC  + DL+LG+S+HG IIR
Sbjct: 77  KSIIRSYTSHGLFLQSVTSFVRMRAFQIYPDHNIFPSVVKSCAMIKDLRLGESVHGSIIR 136

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGKE 16
            G+D DLYT NALM+MYSK QS+  E
Sbjct: 137 YGMDSDLYTCNALMSMYSKFQSLDNE 162


>ref|XP_006354473.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum tuberosum]
          Length = 738

 Score =  115 bits (287), Expect = 8e-24
 Identities = 50/81 (61%), Positives = 65/81 (80%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS++RCY+  G F  SL  F+ MR  GK P  DVFPSVV++CTHL +L++G+S+HGC+IR
Sbjct: 76  KSVVRCYSCHGYFRDSLACFVEMRGWGKLPGSDVFPSVVRACTHLKELRVGESVHGCVIR 135

Query: 93  LGLDFDLYTGNALMNMYSKLQ 31
            G++ DLYTGNALMNMY+KLQ
Sbjct: 136 FGMESDLYTGNALMNMYAKLQ 156


>ref|XP_006491705.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like isoform X1 [Citrus sinensis]
           gi|568877358|ref|XP_006491706.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g23330-like isoform X2 [Citrus sinensis]
          Length = 783

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/87 (60%), Positives = 66/87 (75%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSIIRC T  GL  +SL  F+ M  SG YPDH+VFPSV+KSCT L+D + G+S+H CIIR
Sbjct: 75  KSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIR 134

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGKEV 13
           LG+D DLYT NALMNMY++ Q+M   +
Sbjct: 135 LGVDLDLYTNNALMNMYAQSQNMDMHI 161



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -3

Query: 270 SIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIRL 91
           SII      GLF + L  F  M  +   P H  F S++ +C HL  L LG+ +HGCIIR 
Sbjct: 381 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 440

Query: 90  GLDFDLYTGNALMNMYSK 37
           G D +++  ++L++MY+K
Sbjct: 441 GFDDNMFIASSLLDMYAK 458


>ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citrus clementina]
           gi|557530418|gb|ESR41601.1| hypothetical protein
           CICLE_v10013800mg [Citrus clementina]
          Length = 680

 Score =  114 bits (285), Expect = 1e-23
 Identities = 53/83 (63%), Positives = 65/83 (78%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSIIRC T  GL  +SL  F+ M  SG YPDH+VFPSV+KSCT L+D + G+S+H CIIR
Sbjct: 75  KSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIR 134

Query: 93  LGLDFDLYTGNALMNMYSKLQSM 25
           LG+D DLYT NALMNMY++ Q+M
Sbjct: 135 LGVDLDLYTNNALMNMYAQSQNM 157



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -3

Query: 270 SIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIRL 91
           SII      GLF + L  F  M  +   P H  F S++ +C HL  L LG+ +HGCIIR 
Sbjct: 278 SIIAGCVQNGLFDEGLKFFRQMLIAKIKPRHVSFSSIMPACAHLTTLHLGKQLHGCIIRN 337

Query: 90  GLDFDLYTGNALMNMYSK 37
           G D +++  ++L++MY+K
Sbjct: 338 GFDDNMFIASSLLDMYAK 355


>ref|XP_004247740.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum lycopersicum]
          Length = 699

 Score =  114 bits (285), Expect = 1e-23
 Identities = 50/86 (58%), Positives = 66/86 (76%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KS++RCY+  G F  SL  F+ MR  GK P  DVFPSVV++CTHL +L++G+S+HGC+IR
Sbjct: 76  KSVVRCYSCNGYFRDSLACFVEMRGWGKLPGRDVFPSVVRACTHLKELRVGESVHGCVIR 135

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGKE 16
            GL+ D YTGNALMNMY+KLQ +  +
Sbjct: 136 FGLESDRYTGNALMNMYAKLQVLSHD 161


>ref|XP_007029874.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508718479|gb|EOY10376.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 720

 Score =  112 bits (279), Expect = 7e-23
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSI +C  + GLF  SL  F+ MR  G YPDH + P V+K+C  + +L+LG+SIHGCIIR
Sbjct: 77  KSITKCLANSGLFLNSLTCFVQMRGLGIYPDHKILPFVLKACAFIKNLRLGESIHGCIIR 136

Query: 93  LGLDFDLYTGNALMNMYSKLQSM 25
           LGLDFDL+TGNAL+NMY+K QS+
Sbjct: 137 LGLDFDLFTGNALLNMYAKFQSL 159


>ref|XP_007225005.1| hypothetical protein PRUPE_ppa020300mg [Prunus persica]
           gi|462421941|gb|EMJ26204.1| hypothetical protein
           PRUPE_ppa020300mg [Prunus persica]
          Length = 671

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSIIRCYTS GL   SL SF+ M+A G YPDH+VFPSV+KSCT + DL+ G+S+HGCI+R
Sbjct: 75  KSIIRCYTSHGLCRHSLASFVEMKAFGIYPDHNVFPSVLKSCTLIKDLRFGESVHGCIVR 134

Query: 93  LGLDFDLYTGNALMNMYSKL 34
            G+D DLYT NALMN+  K+
Sbjct: 135 FGMDCDLYTCNALMNIVRKV 154


>ref|XP_006857330.1| hypothetical protein AMTR_s00067p00084570 [Amborella trichopoda]
           gi|548861423|gb|ERN18797.1| hypothetical protein
           AMTR_s00067p00084570 [Amborella trichopoda]
          Length = 405

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 68/88 (77%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           +S+++ ++S GLF QSL  F  MRA+G +PDH +FPSV+KSC  LMDLKLG+SIHGC +R
Sbjct: 111 RSMVKGHSSHGLFDQSLFLFSKMRANGVHPDHHIFPSVLKSCAGLMDLKLGESIHGCAVR 170

Query: 93  LGLDFDLYTGNALMNMYSKLQSMGKEVV 10
           LG D DLY GNALM MYSK  S+ ++ +
Sbjct: 171 LGFDHDLYIGNALMAMYSKCCSVERKSI 198


>ref|XP_002528839.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531751|gb|EEF33573.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 393

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/61 (78%), Positives = 57/61 (93%)
 Frame = -3

Query: 207 MRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIRLGLDFDLYTGNALMNMYSKLQS 28
           MRASGK+PDH+VFPSV+KSCT L+D KLG+S+HGCIIRLG+D DLYTGNALMNMY+K QS
Sbjct: 1   MRASGKHPDHNVFPSVIKSCTLLLDFKLGESVHGCIIRLGVDVDLYTGNALMNMYAKFQS 60

Query: 27  M 25
           +
Sbjct: 61  L 61


>gb|EYU32564.1| hypothetical protein MIMGU_mgv1a002438mg [Mimulus guttatus]
          Length = 675

 Score =  100 bits (250), Expect = 2e-19
 Identities = 47/80 (58%), Positives = 63/80 (78%)
 Frame = -3

Query: 273 KSIIRCYTSLGLFYQSLLSFIGMRASGKYPDHDVFPSVVKSCTHLMDLKLGQSIHGCIIR 94
           KSII+C  S G F +S+  F  M ASGK PD +VFPS++K+C +L DL+LG+S+HGC++R
Sbjct: 79  KSIIKCCASTGNFMESVDFFKRMIASGKSPDRNVFPSLLKTCAYLGDLRLGESVHGCVVR 138

Query: 93  LGLDFDLYTGNALMNMYSKL 34
           LGLD DL+TGNALMN+  K+
Sbjct: 139 LGLDSDLFTGNALMNIVRKV 158