BLASTX nr result
ID: Cocculus23_contig00060392
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00060392
(234 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 129 6e-28
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 128 7e-28
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 127 2e-27
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 124 1e-26
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 124 2e-26
emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera] 123 2e-26
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 122 4e-26
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 122 4e-26
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 120 2e-25
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761... 118 1e-24
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 118 1e-24
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera] 118 1e-24
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 117 2e-24
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 117 2e-24
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 117 2e-24
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni... 117 2e-24
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 117 2e-24
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 117 2e-24
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 117 2e-24
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 117 2e-24
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 129 bits (323), Expect = 6e-28
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
Q+ AF L+KEKL SAPLLALPDF+KTFEIECDASG+GIGAVLMQ+ RPIAYF EKL GA
Sbjct: 76 QEKAFNLIKEKLVSAPLLALPDFTKTFEIECDASGIGIGAVLMQKGRPIAYFSEKLGGAA 135
Query: 189 LNYPTYDKELYALVR 233
LNYPTYDKE+YALVR
Sbjct: 136 LNYPTYDKEMYALVR 150
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 128 bits (322), Expect = 7e-28
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
QD AF +KE+L APLL+LPDFSKTFEIECDASG+GIGAVLMQEKRPIAYF EKLNGA
Sbjct: 785 QDRAFIEIKERLCGAPLLSLPDFSKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLNGAT 844
Query: 189 LNYPTYDKELYAL 227
LNYPTYDKELYAL
Sbjct: 845 LNYPTYDKELYAL 857
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 127 bits (318), Expect = 2e-27
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
AQ+ AF+ LKEKL+ AP+L+LPDF KTFEIECDASGVGIG VLMQ+K+PIAYF EKL GA
Sbjct: 1179 AQEDAFQALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGA 1238
Query: 186 QLNYPTYDKELYALVR 233
LNYPTYDKELYALVR
Sbjct: 1239 TLNYPTYDKELYALVR 1254
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 124 bits (311), Expect = 1e-26
Identities = 60/76 (78%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
A + AF+ LKEKL+ AP+L+LPDF KTFEIECDA GVGIGAVLMQ+K+PIAYF EKL GA
Sbjct: 598 APEDAFQALKEKLTHAPVLSLPDFLKTFEIECDAPGVGIGAVLMQDKKPIAYFSEKLGGA 657
Query: 186 QLNYPTYDKELYALVR 233
LNYPTYDKELYALVR
Sbjct: 658 TLNYPTYDKELYALVR 673
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 124 bits (310), Expect = 2e-26
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
Q+ AF L+KEKL SAPLLAL DF+KTFEIECD SG+GIGAVLMQE RPIAY EKL+GA
Sbjct: 812 QERAFNLIKEKLVSAPLLALSDFAKTFEIECDTSGIGIGAVLMQEGRPIAYVSEKLSGAT 871
Query: 189 LNYPTYDKELYALVR 233
LNYPTYDKE+YALVR
Sbjct: 872 LNYPTYDKEMYALVR 886
>emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]
Length = 1159
Score = 123 bits (309), Expect = 2e-26
Identities = 60/73 (82%), Positives = 64/73 (87%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
QD AF +KE+L PLL+LPDFSKTFEIECDASG+GI AVLMQEKRPIAYF EKLNGA
Sbjct: 680 QDRAFIEIKERLCGPPLLSLPDFSKTFEIECDASGIGIEAVLMQEKRPIAYFSEKLNGAT 739
Query: 189 LNYPTYDKELYAL 227
LNYPTYDKELYAL
Sbjct: 740 LNYPTYDKELYAL 752
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 122 bits (307), Expect = 4e-26
Identities = 58/75 (77%), Positives = 66/75 (88%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
Q+ AF LLKEKL+ AP+LALPDFSKTFE+ECDASGVG+GAVL+Q PIAYF EKL+ A
Sbjct: 1080 QEQAFALLKEKLTKAPVLALPDFSKTFELECDASGVGVGAVLLQGGHPIAYFSEKLHSAT 1139
Query: 189 LNYPTYDKELYALVR 233
LNYPTYDKELYAL+R
Sbjct: 1140 LNYPTYDKELYALIR 1154
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 122 bits (307), Expect = 4e-26
Identities = 59/73 (80%), Positives = 64/73 (87%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
QD AF +KE+L APLL+LP+FSKTFEIECDASG+GI VLMQEKRPIAYF EKLNGA
Sbjct: 468 QDRAFIEIKERLCGAPLLSLPNFSKTFEIECDASGIGIATVLMQEKRPIAYFSEKLNGAT 527
Query: 189 LNYPTYDKELYAL 227
LNYPTYDKELYAL
Sbjct: 528 LNYPTYDKELYAL 540
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 120 bits (301), Expect = 2e-25
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
Q+HAF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+QE +P+AYF EKL+G+
Sbjct: 991 QEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSV 1050
Query: 189 LNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 1051 LNYSTYDKELYALVR 1065
>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
italica]
Length = 738
Score = 118 bits (295), Expect = 1e-24
Identities = 54/76 (71%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q+ AF LK+KL++APLL LPDF+K FE+ECDASG+G+GAVL+QE +P+AYF EKL+GA
Sbjct: 295 SQEVAFSTLKDKLTNAPLLQLPDFTKVFELECDASGIGLGAVLLQEGKPVAYFSEKLSGA 354
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 355 SLNYSTYDKELYALVR 370
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 118 bits (295), Expect = 1e-24
Identities = 54/76 (71%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q+ AF LK+KL++APLL LPDF+K FE+ECDASG+G+GAVL+QE +P+AYF EKL+GA
Sbjct: 320 SQEVAFSTLKDKLTNAPLLQLPDFTKVFELECDASGIGLGAVLLQEGKPVAYFSEKLSGA 379
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 380 SLNYSTYDKELYALVR 395
>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
Length = 1115
Score = 118 bits (295), Expect = 1e-24
Identities = 58/75 (77%), Positives = 61/75 (81%)
Frame = +3
Query: 9 QDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQ 188
QD AF +KE+L APLLALPDFSKTFEIECDASG+GIG VLM EK I YF EKLN
Sbjct: 635 QDRAFIEIKERLCGAPLLALPDFSKTFEIECDASGIGIGGVLMXEKXXITYFSEKLNXTT 694
Query: 189 LNYPTYDKELYALVR 233
LNYPTYDKELYALVR
Sbjct: 695 LNYPTYDKELYALVR 709
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q++AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+QE +P+AYF EKL+G
Sbjct: 987 SQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGP 1046
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 1047 VLNYSTYDKELYALVR 1062
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = +3
Query: 12 DHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQL 191
+ AF+ LKEKL S+P+L LPD K F + CDAS G+G VLMQE +AY +L +
Sbjct: 1781 EKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEG 1840
Query: 192 NYPTYDKELYALV 230
NYPT+D EL A+V
Sbjct: 1841 NYPTHDLELAAVV 1853
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q++AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+QE +P+AYF EKL+G
Sbjct: 351 SQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGP 410
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 411 VLNYSTYDKELYALVR 426
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q++AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+QE +P+AYF EKL+G
Sbjct: 910 SQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGP 969
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 970 VLNYSTYDKELYALVR 985
>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1234
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q++AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+QE +P+AYF EKL+G
Sbjct: 803 SQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGP 862
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 863 VLNYSTYDKELYALVR 878
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q++AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+QE +P+AYF EKL+G
Sbjct: 910 SQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGP 969
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 970 VLNYSTYDKELYALVR 985
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
+Q++AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+QE +P+AYF EKL+G
Sbjct: 823 SQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGL 882
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 883 VLNYSTYDKELYALVR 898
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +3
Query: 12 DHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGAQL 191
+ AF+ LKEKL S+P+L LPD K F + CDAS G+G VLMQ+ +AY +L +
Sbjct: 1756 EKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLWPHEG 1815
Query: 192 NYPTYDKELYALV 230
NYPT+D EL A+V
Sbjct: 1816 NYPTHDLELAAVV 1828
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 66/76 (86%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
AQ+ AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+Q+ +P+AYF EKL+G
Sbjct: 1046 AQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGP 1105
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 1106 SLNYSTYDKELYALVR 1121
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 117 bits (293), Expect = 2e-24
Identities = 53/76 (69%), Positives = 66/76 (86%)
Frame = +3
Query: 6 AQDHAFKLLKEKLSSAPLLALPDFSKTFEIECDASGVGIGAVLMQEKRPIAYFGEKLNGA 185
AQ+ AF +LK+KL+ APLL LPDF+KTFE+ECDASG+G+G VL+Q+ +P+AYF EKL+G
Sbjct: 1043 AQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGP 1102
Query: 186 QLNYPTYDKELYALVR 233
LNY TYDKELYALVR
Sbjct: 1103 SLNYSTYDKELYALVR 1118