BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00060056
         (489 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279486.1| PREDICTED: putative transcription factor bHL...    80   2e-13
ref|XP_006475473.1| PREDICTED: putative transcription factor bHL...    75   1e-11
ref|XP_006475472.1| PREDICTED: putative transcription factor bHL...    75   1e-11
ref|XP_006475471.1| PREDICTED: putative transcription factor bHL...    75   1e-11
ref|XP_006451491.1| hypothetical protein CICLE_v10007937mg [Citr...    75   1e-11
ref|XP_002514122.1| DNA binding protein, putative [Ricinus commu...    72   8e-11
ref|XP_006280405.1| hypothetical protein CARUB_v10026331mg [Caps...    72   1e-10
ref|XP_002309216.1| basic helix-loop-helix family protein [Popul...    69   5e-10
ref|NP_200506.1| putative transcription factor bHLH041 [Arabidop...    68   1e-09
ref|XP_007012810.1| Basic helix-loop-helix DNA-binding family pr...    66   6e-09
ref|XP_002866174.1| predicted protein [Arabidopsis lyrata subsp....    64   3e-08
gb|EYU27320.1| hypothetical protein MIMGU_mgv1a026242mg [Mimulus...    62   6e-08
ref|XP_006401262.1| hypothetical protein EUTSA_v10013360mg [Eutr...    62   6e-08
ref|XP_004288955.1| PREDICTED: putative transcription factor bHL...    62   6e-08
ref|XP_007203703.1| hypothetical protein PRUPE_ppa020972mg [Prun...    60   3e-07
ref|XP_006600454.1| PREDICTED: putative transcription factor bHL...    59   7e-07
ref|XP_004243953.1| PREDICTED: putative transcription factor bHL...    57   3e-06
ref|XP_006357706.1| PREDICTED: putative transcription factor bHL...    56   5e-06
ref|XP_006357705.1| PREDICTED: putative transcription factor bHL...    56   5e-06
ref|XP_004488061.1| PREDICTED: putative transcription factor bHL...    55   8e-06

>ref|XP_002279486.1| PREDICTED: putative transcription factor bHLH041 [Vitis vinifera]
           gi|297738655|emb|CBI27900.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 47/106 (44%), Positives = 69/106 (65%)
 Frame = -1

Query: 489 QELEARLSSSDARGIAITEEANGSPSRRVDVQIRQAAESTSEAREVNLRVTVRGDCNIID 310
           Q LEA+++  +       E    S + R+ VQI  A+E T E R ++L+VTVR DC+I+D
Sbjct: 393 QALEAQINLKNEGN---NEGGGDSSNERLSVQITNASEPTPEERNIDLQVTVRADCSILD 449

Query: 309 LVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
           LVIR+++FLK+V+NVSL  + A+T    + + T  I  VILRLKI+
Sbjct: 450 LVIRILDFLKRVKNVSLMSMNAET----RMAETSPINHVILRLKIE 491


>ref|XP_006475473.1| PREDICTED: putative transcription factor bHLH041-like isoform X3
           [Citrus sinensis]
          Length = 548

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
 Frame = -1

Query: 486 ELEARLSSSDARGIAITEEANGSPS----RRVDVQIRQAAESTSEAREVNLRVTVRGDCN 319
           EL  R    +A+ +    EA  + S     RV V++   AESTSE R V++RV VRG+C 
Sbjct: 421 ELSRRNQILEAQVLPKAREAAAAASVNAEERVQVRVSPVAESTSEWRMVDIRVIVRGECP 480

Query: 318 IIDLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
            +DLVIR++EFLK   N+SL  +EA+T   Q A+++ S   VILRL+I+
Sbjct: 481 ALDLVIRILEFLKGDDNLSLISVEANT---QIAADSTSFNHVILRLRIQ 526


>ref|XP_006475472.1| PREDICTED: putative transcription factor bHLH041-like isoform X2
           [Citrus sinensis]
          Length = 553

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
 Frame = -1

Query: 486 ELEARLSSSDARGIAITEEANGSPS----RRVDVQIRQAAESTSEAREVNLRVTVRGDCN 319
           EL  R    +A+ +    EA  + S     RV V++   AESTSE R V++RV VRG+C 
Sbjct: 426 ELSRRNQILEAQVLPKAREAAAAASVNAEERVQVRVSPVAESTSEWRMVDIRVIVRGECP 485

Query: 318 IIDLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
            +DLVIR++EFLK   N+SL  +EA+T   Q A+++ S   VILRL+I+
Sbjct: 486 ALDLVIRILEFLKGDDNLSLISVEANT---QIAADSTSFNHVILRLRIQ 531


>ref|XP_006475471.1| PREDICTED: putative transcription factor bHLH041-like isoform X1
           [Citrus sinensis]
          Length = 554

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
 Frame = -1

Query: 486 ELEARLSSSDARGIAITEEANGSPS----RRVDVQIRQAAESTSEAREVNLRVTVRGDCN 319
           EL  R    +A+ +    EA  + S     RV V++   AESTSE R V++RV VRG+C 
Sbjct: 427 ELSRRNQILEAQVLPKAREAAAAASVNAEERVQVRVSPVAESTSEWRMVDIRVIVRGECP 486

Query: 318 IIDLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
            +DLVIR++EFLK   N+SL  +EA+T   Q A+++ S   VILRL+I+
Sbjct: 487 ALDLVIRILEFLKGDDNLSLISVEANT---QIAADSTSFNHVILRLRIQ 532


>ref|XP_006451491.1| hypothetical protein CICLE_v10007937mg [Citrus clementina]
           gi|557554717|gb|ESR64731.1| hypothetical protein
           CICLE_v10007937mg [Citrus clementina]
          Length = 542

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
 Frame = -1

Query: 486 ELEARLSSSDARGIAITEEANGSPS----RRVDVQIRQAAESTSEAREVNLRVTVRGDCN 319
           EL  R    +A+ +    EA  + S     RV V++   AESTSE R V++RV VRG+C 
Sbjct: 415 ELSRRNQILEAQVLPKAREAAAAASVNAEERVQVRVSPVAESTSEWRMVDIRVIVRGECP 474

Query: 318 IIDLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
            +DLVIR++EFLK   N+SL  +EA+T   Q A+++ S   VILRL+I+
Sbjct: 475 ALDLVIRILEFLKGDDNLSLISVEANT---QIAADSTSFNHVILRLRIQ 520


>ref|XP_002514122.1| DNA binding protein, putative [Ricinus communis]
           gi|223546578|gb|EEF48076.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 502

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
 Frame = -1

Query: 489 QELEARLS----SSDARGIAITEEANGSPSRRVDVQIRQAAESTSE-AREVNLRVTVRGD 325
           Q+LEA L      + A  +    + +GS   RV+V+I   +ESTSE  R +NL + +RG+
Sbjct: 374 QQLEAELLPAAIEAHAGEVIAENQQSGSWEGRVEVRITNVSESTSEDERIINLLIVLRGE 433

Query: 324 CNIIDLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
           C + D VIR++EFLKQV N +L  ++A+T   + AS   S+ RVILRL+I+
Sbjct: 434 CPVSDFVIRILEFLKQVNNANLMSVDANTS--RGASR--SLNRVILRLRIE 480


>ref|XP_006280405.1| hypothetical protein CARUB_v10026331mg [Capsella rubella]
           gi|482549109|gb|EOA13303.1| hypothetical protein
           CARUB_v10026331mg [Capsella rubella]
          Length = 474

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = -1

Query: 489 QELEARLSSSDARGIAITEEANGSPSRRVDVQIRQAAESTSEAREVNLRVTVRGDC-NII 313
           +ELEA+L+           E +  P  R +V+IR   ESTS  R ++LRV +RGD   + 
Sbjct: 354 RELEAKLAGEKEI------ENDLQPDERFNVRIRHVPESTSRERILDLRVVLRGDIIRVE 407

Query: 312 DLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKI 175
           DL+IRL+EFLKQ+ NVSL  IEA T++  +A    SI  V LRLKI
Sbjct: 408 DLMIRLLEFLKQINNVSLASIEAQTQA--RADGDSSIVLVSLRLKI 451


>ref|XP_002309216.1| basic helix-loop-helix family protein [Populus trichocarpa]
           gi|222855192|gb|EEE92739.1| basic helix-loop-helix
           family protein [Populus trichocarpa]
          Length = 395

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = -1

Query: 489 QELEARLSSSDARGIAITEEANGSPSRRVDVQIRQAAESTSEAREVNLRVTVRGDCNIID 310
           Q+LEA+LS       A   +   S   R+DV++   +ESTSE R ++L V +RG+  I+D
Sbjct: 277 QKLEAQLSK------AAVSQVRDSSYERLDVRVTHISESTSEQRIIDLVVNLRGESPILD 330

Query: 309 LVI-RLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
            VI R++EFL+QV +VSL  IEA T +    + + S  RVILRL I+
Sbjct: 331 TVITRILEFLRQVTDVSLISIEASTHT----AESTSFNRVILRLNIE 373


>ref|NP_200506.1| putative transcription factor bHLH041 [Arabidopsis thaliana]
           gi|75311566|sp|Q9LTS4.1|BH041_ARATH RecName:
           Full=Putative transcription factor bHLH041; AltName:
           Full=Basic helix-loop-helix protein 41; Short=AtbHLH41;
           Short=bHLH 41; AltName: Full=Transcription factor EN 51;
           AltName: Full=bHLH transcription factor bHLH041
           gi|8777436|dbj|BAA97026.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009444|gb|AED96827.1|
           putative transcription factor bHLH041 [Arabidopsis
           thaliana]
          Length = 466

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
 Frame = -1

Query: 489 QELEARLSSSDARGIAITEEANGSPSRRVDVQIRQAAESTSEAREVNLRVTVRGDC-NII 313
           +E+EA+L+    R I    E +  P  R +V+IR   ESTS  R ++LRV +RGD   + 
Sbjct: 346 REVEAKLAGE--REI----ENDLRPEERFNVRIRHIPESTSRERTLDLRVVLRGDIIRVD 399

Query: 312 DLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVI-LRLKIK 172
           DL+IRL+EFLKQ+ NVSL  IEA T  L +A    SI  VI LRLKI+
Sbjct: 400 DLMIRLLEFLKQINNVSLVSIEART--LARAEGDTSIVLVISLRLKIE 445


>ref|XP_007012810.1| Basic helix-loop-helix DNA-binding family protein, putative
           [Theobroma cacao] gi|508783173|gb|EOY30429.1| Basic
           helix-loop-helix DNA-binding family protein, putative
           [Theobroma cacao]
          Length = 523

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/106 (42%), Positives = 65/106 (61%)
 Frame = -1

Query: 489 QELEARLSSSDARGIAITEEANGSPSRRVDVQIRQAAESTSEAREVNLRVTVRGDCNIID 310
           Q LEA+L  S     A+  E  GS + R  V+I    ESTSE R ++LRV+VRG+  I+D
Sbjct: 403 QLLEAQLLPSRE---AVGGEVTGSSNERFSVRITPVPESTSEQRIMDLRVSVRGERPIVD 459

Query: 309 LVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKIK 172
           ++I L++FLK  +NVSL  IEA+T      ++  S+    LRL+I+
Sbjct: 460 VLIHLLQFLKLDRNVSLLSIEANT----HITDAGSVNNFNLRLRIE 501


>ref|XP_002866174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312009|gb|EFH42433.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 462

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = -1

Query: 417 PSRRVDVQIRQAAESTSEAREVNLRVTVRGDC-NIIDLVIRLIEFLKQVQNVSLEFIEAD 241
           P+ R +V I   +ESTS  R ++LRV +RGD   + DL+IRL+EFLKQ+ NVSL  IEA 
Sbjct: 364 PNERFNVHISHISESTSRERILDLRVVLRGDSIRVDDLMIRLLEFLKQINNVSLVSIEAR 423

Query: 240 TESLQQASNTISIGRVILRLKIK 172
           T      +   S+  V LRLKI+
Sbjct: 424 TR-----ARDTSVVLVSLRLKIE 441


>gb|EYU27320.1| hypothetical protein MIMGU_mgv1a026242mg [Mimulus guttatus]
          Length = 516

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
 Frame = -1

Query: 489 QELEARLSSSDARGIAITEEANGSPSRRVDVQIRQAAE-------STSEAREVNLRVTVR 331
           Q LE+++SSS      +    N S S  VD Q R + E       STS+AR ++LRV VR
Sbjct: 387 QMLESKISSSTLSDQVVV--GNSSSSSAVDHQTRVSVEITQVQSPSTSDARLLDLRVRVR 444

Query: 330 GDCNIIDLVIRLIEFLKQVQNV-SLEFIEADTESLQQASNTISIGRVILRLKIK 172
           G+ +++D VIR++EFLKQ +NV ++  IE++T   +    ++ +  ++LRLKI+
Sbjct: 445 GERSMLDSVIRIMEFLKQQRNVITVLSIESNTRMFE----SVPVHGIVLRLKIE 494


>ref|XP_006401262.1| hypothetical protein EUTSA_v10013360mg [Eutrema salsugineum]
           gi|557102352|gb|ESQ42715.1| hypothetical protein
           EUTSA_v10013360mg [Eutrema salsugineum]
          Length = 493

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
 Frame = -1

Query: 417 PSRRVDVQIRQAAESTSEAREVNLRVTVRGDCNII--DLVIRLIEFLKQVQNVSLEFIEA 244
           P  R +V++RQ  ESTS  R  +LRV  R D NI+  DL+IR++EFLKQ+ NVSL  IEA
Sbjct: 392 PDERFNVRLRQIPESTSSERIFDLRVVHRED-NIMADDLLIRILEFLKQINNVSLVSIEA 450

Query: 243 DTESLQQASNTISIGRVILRLKIK 172
            T + +  + ++ +  V LRLKI+
Sbjct: 451 RTRAREDEATSVVL--VSLRLKIE 472


>ref|XP_004288955.1| PREDICTED: putative transcription factor bHLH041-like [Fragaria
           vesca subsp. vesca]
          Length = 577

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
 Frame = -1

Query: 435 EEANGSPSRRVDVQIRQAAESTSEARE--VNLRVTVR-GDCNIIDLVIRLIEFLKQVQNV 265
           EEA  S + RV V +   + ST++  +  V L+V VR G+C+  D+VIR++EFLKQV N+
Sbjct: 464 EEAGSSSTERVSVTLTHVSGSTTDQNQRIVALQVIVRSGECSTEDIVIRILEFLKQVNNM 523

Query: 264 SLEFIEADTESLQQASNTISIGRVILRLKI 175
           SL  +EA T   +   N   I RV+LRL++
Sbjct: 524 SLMSMEASTWKTELHPN---INRVVLRLRV 550


>ref|XP_007203703.1| hypothetical protein PRUPE_ppa020972mg [Prunus persica]
           gi|462399234|gb|EMJ04902.1| hypothetical protein
           PRUPE_ppa020972mg [Prunus persica]
          Length = 555

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
 Frame = -1

Query: 489 QELEARLSSSDARGI-AITEEANGSPSRRVDVQI-RQAAESTSEARE--VNLRVTVRG-D 325
           Q+LEARL  +       +   A GS + RV V + R  +EST +  +   +L+V +R  +
Sbjct: 419 QQLEARLPPAAKEAYNEVAAAAAGSSNERVSVTLTRVVSESTPDQDQQIFDLQVVLRSVE 478

Query: 324 CNIIDLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKI 175
           C   DLVIR++EFLKQV NVSL  +EA+T      SN   + RVILRL++
Sbjct: 479 CCTEDLVIRILEFLKQVNNVSLMSMEANTWMSGSDSN---VNRVILRLRV 525


>ref|XP_006600454.1| PREDICTED: putative transcription factor bHLH041-like [Glycine max]
          Length = 542

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = -1

Query: 489 QELEARLSSSDARGIAITEEANGSPS---RRVDVQIRQAAESTS-EAREVNLRVTVRGDC 322
           Q+L   LS  +A   + TEE    PS    R++V +   +ES+S E + VNL+VTVRG+ 
Sbjct: 409 QQLMTVLSVKEATATS-TEENKAKPSSSYERLNVGVSHVSESSSSEEQMVNLQVTVRGES 467

Query: 321 NIIDLVIRLIEFLKQVQNVSLEFIEADTESLQQASNTISIGRVILRLKI 175
            ++DL+I+L+EFL++VQNV+   ++A+       +   +I ++  RL+I
Sbjct: 468 CLVDLLIQLLEFLERVQNVNFVSMDAN----NHITGETAINQLTFRLRI 512


>ref|XP_004243953.1| PREDICTED: putative transcription factor bHLH041-like [Solanum
           lycopersicum]
          Length = 464

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
 Frame = -1

Query: 486 ELEARLSSSDARGIAITEEANGSPSRRVDVQIRQAAESTSEAREVNLRVTVR-GDCNIID 310
           E+     + D   +  + +       RV V+I +   S SE+R V L+V+VR G+CN++D
Sbjct: 345 EIMLNAQALDKSSMMKSNDVGDGNDERVVVEIIKNVSSESESRTVELQVSVRSGECNVLD 404

Query: 309 LVIRLIEFLKQVQNVSLEFIEADT--ESLQQASNTISI 202
           L  RL+EFLK   N+SL+ + A+T    +   S TI+I
Sbjct: 405 LATRLLEFLKTQDNLSLQSVAANTRPSMVTHVSLTITI 442


>ref|XP_006357706.1| PREDICTED: putative transcription factor bHLH041-like isoform X2
           [Solanum tuberosum]
          Length = 505

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = -1

Query: 414 SRRVDVQIRQAAEST-SEAREVNLRVTVRGDCNIIDLVIRLIEFLKQVQNVSLEFIEADT 238
           + RV V+I   +ES+ SE+R V L+V+VRG+CN++DL  R +EFLK   +++LE + A+T
Sbjct: 410 NERVAVEITNVSESSLSESRVVKLQVSVRGECNVLDLATRSLEFLKTQNDLTLESVAANT 469

Query: 237 ESLQQASNTISI 202
                   T+ I
Sbjct: 470 RPSMVTHITLRI 481


>ref|XP_006357705.1| PREDICTED: putative transcription factor bHLH041-like isoform X1
           [Solanum tuberosum]
          Length = 510

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = -1

Query: 414 SRRVDVQIRQAAEST-SEAREVNLRVTVRGDCNIIDLVIRLIEFLKQVQNVSLEFIEADT 238
           + RV V+I   +ES+ SE+R V L+V+VRG+CN++DL  R +EFLK   +++LE + A+T
Sbjct: 415 NERVAVEITNVSESSLSESRVVKLQVSVRGECNVLDLATRSLEFLKTQNDLTLESVAANT 474

Query: 237 ESLQQASNTISI 202
                   T+ I
Sbjct: 475 RPSMVTHITLRI 486


>ref|XP_004488061.1| PREDICTED: putative transcription factor bHLH041-like isoform X2
           [Cicer arietinum]
          Length = 532

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -1

Query: 441 ITEEANGSPSRRVDVQIRQAAESTSEARE----VNLRVTVRGDCNIIDLVIRLIEFLKQV 274
           IT+ +N S + R++V++    ES++ + E    V+L+V V G  + +D++IRL+EFLKQV
Sbjct: 413 ITKASNFSSNERLNVRVLHVPESSTSSLENQPMVDLQVNVMGQISQVDILIRLLEFLKQV 472

Query: 273 QNVSLEFIEADTESLQQASNTISIGRVILRLKI 175
           Q+V+L  I+A   +  Q +   SI ++  RL I
Sbjct: 473 QHVNLVSIDATNTNNAQVN---SIHQLTFRLMI 502