BLASTX nr result
ID: Cocculus23_contig00059743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00059743
(277 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 93 3e-17
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar... 93 4e-17
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar... 91 1e-16
ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer ar... 90 3e-16
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 83 3e-14
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 83 3e-14
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 83 3e-14
ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer ar... 83 5e-14
ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus] 82 1e-13
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 82 1e-13
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 82 1e-13
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 82 1e-13
ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Popu... 80 3e-13
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein... 79 7e-13
ref|XP_006403348.1| hypothetical protein EUTSA_v10003399mg, part... 73 4e-11
ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer ar... 72 1e-10
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 67 3e-09
ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer ar... 61 2e-07
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote... 60 2e-07
emb|CAH68829.1| polyprotein [Carnation etched ring virus] 60 2e-07
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W AVL+EE +G YYCGH SG FK +E HYH T KE LAVK I KF+F LR YQFE+QM
Sbjct: 1649 WGAVLIEEINGVKYYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFDFHLRGYQFEVQM 1708
Query: 41 DNSAFHKVWNIK 6
DNS+F ++ K
Sbjct: 1709 DNSSFPRILEFK 1720
>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 803
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W A+L+EE DG +YCGH SG FK +E HYH T KE LAVK I KF+F LR YQFE+QM
Sbjct: 725 WGAILIEEIDGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIHKFDFHLRGYQFEVQM 784
Query: 41 DNSAFHKVWNIK 6
DNS+F ++ K
Sbjct: 785 DNSSFPRILEFK 796
>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1170
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W AVL+EE +G +YCGH SG FK +E HYH T KE LAVK I KF+F LR YQFE+QM
Sbjct: 982 WGAVLIEEINGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFDFHLRGYQFEVQM 1041
Query: 41 DNSAFHKVWNIK 6
DNS+F ++ K
Sbjct: 1042 DNSSFPRILEFK 1053
>ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 313
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W AVL+EE +G +YCGH SG FK +E HYH T KE LAVK I KF+F LR YQFE+QM
Sbjct: 220 WGAVLIEEINGVKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFDFHLRGYQFEVQM 279
Query: 41 DNSAFHKVWNIK 6
DNS F ++ K
Sbjct: 280 DNSYFPRILEFK 291
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WSAVLLEEH+G CG SG FK SE HYH T KE+LAVKN I KFNFFL F ++M
Sbjct: 1695 WSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNFFLIHTNFLVEM 1754
Query: 41 DNSAFHKV 18
D AF K+
Sbjct: 1755 DMRAFPKM 1762
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WSAVLLEEH+G CG SG FK SE HYH T KE+LAVKN I KFNFFL F ++M
Sbjct: 1695 WSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNFFLIHTNFLVEM 1754
Query: 41 DNSAFHKV 18
D AF K+
Sbjct: 1755 DMRAFPKM 1762
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WSAVLLEEH+G CG SG FK SE HYH T KE+LAVKN I KFNFFL F ++M
Sbjct: 1694 WSAVLLEEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFNFFLIHTNFLVEM 1753
Query: 41 DNSAFHKV 18
D AF K+
Sbjct: 1754 DMRAFPKM 1761
>ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 279
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W AVL+EE +G YYCGH SG FK +E HYH T KE LAVK I KF+F LR YQFE+QM
Sbjct: 215 WGAVLIEEINGVKYYCGHASGQFKEAEKHYHTTYKEALAVKLGIQKFDFHLRGYQFEVQM 274
Query: 41 D 39
+
Sbjct: 275 E 275
>ref|YP_008992015.1| RNase_H [Citrus endogenous pararetrovirus]
Length = 124
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WSAVLLEEH+G ++C H SG FK SE +YH+ KE+L VK I KF F L + F I M
Sbjct: 11 WSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFHLISHTFLINM 70
Query: 41 DNSAFHKVWNIK 6
DNS+F ++++ K
Sbjct: 71 DNSSFPRIFDFK 82
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WSAVLLEEH+G ++C H SG FK SE +YH+ KE+L VK I KF F L + F I M
Sbjct: 1537 WSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFHLISHTFLINM 1596
Query: 41 DNSAFHKVWNIK 6
DNS+F ++++ K
Sbjct: 1597 DNSSFPRIFDFK 1608
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WSAVLLEEH+G ++C H SG FK SE +YH+ KE+L VK I KF F L + F I M
Sbjct: 1635 WSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFHLISHTFLINM 1694
Query: 41 DNSAFHKVWNIK 6
DNS+F ++++ K
Sbjct: 1695 DNSSFPRIFDFK 1706
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WSAVLLEEH+G ++C H SG FK SE +YH+ KE+L VK I KF F L + F I M
Sbjct: 1648 WSAVLLEEHNGKRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFHLISHTFLINM 1707
Query: 41 DNSAFHKVWNIK 6
DNS+F ++++ K
Sbjct: 1708 DNSSFPRIFDFK 1719
>ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Populus trichocarpa]
gi|550349213|gb|EEE85243.2| hypothetical protein
POPTR_0001s38890g [Populus trichocarpa]
Length = 309
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
WS VLLE+ +GH + CG++SG FK SE HYH T KE+LAVK I KF F L Y F + M
Sbjct: 35 WSDVLLEDKNGHRHICGYKSGSFKESETHYHSTFKEILAVKYGIQKFEFHLVAYHFTVIM 94
Query: 41 DNSAFHKVWNIK 6
D S+F K+ K
Sbjct: 95 DCSSFPKMLQFK 106
>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
Length = 758
Score = 79.0 bits (193), Expect = 7e-13
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W A+LLEE D H CG++SG FK SE HYH T KE+LAVK I KF L + F+I+M
Sbjct: 302 WGAILLEERDNHRQICGYKSGHFKDSEKHYHSTFKEILAVKRGIEKFQIHLIGHHFQIEM 361
Query: 41 DNSAFHKVWNIK 6
D S+F ++ + K
Sbjct: 362 DMSSFPRMLHFK 373
>ref|XP_006403348.1| hypothetical protein EUTSA_v10003399mg, partial [Eutrema
salsugineum] gi|557104461|gb|ESQ44801.1| hypothetical
protein EUTSA_v10003399mg, partial [Eutrema salsugineum]
Length = 187
Score = 73.2 bits (178), Expect = 4e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = -3
Query: 215 AVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQMDN 36
A+L EE +G CG++SG FK SE+HYH T KE+LAVK I KF F L ++F I+MD
Sbjct: 41 AILFEEINGKRQICGYKSGRFKDSEMHYHSTFKEILAVKKAIEKFEFHLIGHKFRIEMDM 100
Query: 35 SAFHKVWNIK 6
S+F K+ K
Sbjct: 101 SSFPKMLQFK 110
>ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 181
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEI 48
W +L+EE G +YCGH SG FK +E HYH T KE LAVK I F+F LR YQFE+
Sbjct: 124 WGTILIEEIKGIKHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQNFDFHLRGYQFEV 181
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
gi|557090298|gb|ESQ31006.1| hypothetical protein
EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = -3
Query: 221 WSAVLLEEHD-GHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQ 45
W AVLLE+ + G CG++SG+FK SE HYH T KE+LAVK I KF + F I+
Sbjct: 1541 WGAVLLEKDEKGKRSICGYKSGVFKDSEKHYHSTYKEILAVKRGIEKFESHIVGQHFLIE 1600
Query: 44 MDNSAFHKVWNIK 6
MD S+F K+ K
Sbjct: 1601 MDMSSFSKMIQFK 1613
>ref|XP_004515135.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 159
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPY 60
W A+L+E+ +G +Y GH SG FK +E HYH + KE LAVK I KF+F LR Y
Sbjct: 106 WGALLIEDINGVKHYYGHASGQFKEAEKHYHTSYKEALAVKLGIQKFDFHLRGY 159
>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Carnation etched ring virus]
gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
polyprotein; Includes: RecName: Full=Aspartic protease;
Includes: RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase gi|58863|emb|CAA28360.1|
unnamed protein product [Carnation etched ring virus]
gi|225356|prf||1301227E ORF 5
Length = 659
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W +L H+ H Y C + SG FK +E +YH KELLAV I KF+ +L P +F I+
Sbjct: 541 WGGILKAIHNSHEYICRYASGSFKAAERNYHSNEKELLAVIRVIKKFSIYLTPSRFLIRT 600
Query: 41 DNSAFHKVWNI 9
DN F NI
Sbjct: 601 DNKNFTHFVNI 611
>emb|CAH68829.1| polyprotein [Carnation etched ring virus]
Length = 656
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = -3
Query: 221 WSAVLLEEHDGHTYYCGHESGLFKPSELHYHITIKELLAVKNDI*KFNFFLRPYQFEIQM 42
W +L H+ H Y C + SG FK +E +YH KELLAV I KF+ +L P +F I+
Sbjct: 538 WGGILKAIHNSHEYICRYASGSFKAAERNYHSNEKELLAVFRVIYKFSIYLTPCRFLIRS 597
Query: 41 DNSAFHKVWNI 9
DN F NI
Sbjct: 598 DNKNFTHFVNI 608