BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00059543
         (273 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381734.1| DNA-directed RNA polymerase family protein [...   142   6e-32
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun...   141   1e-31
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   137   1e-30
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr...   137   1e-30
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ...   137   1e-30
emb|CBI28035.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   137   1e-30
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps...   137   2e-30
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   136   3e-30
ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ri...   136   3e-30
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A...   135   8e-30
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...   133   3e-29
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I...   132   5e-29
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   132   5e-29
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I...   131   1e-28
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus...   130   2e-28
ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, I...   130   2e-28
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun...   130   2e-28
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I...   130   2e-28
ref|XP_004145446.1| PREDICTED: DNA-directed RNA polymerases I, I...   129   4e-28

>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  142 bits (357), Expect = 6e-32
 Identities = 71/88 (80%), Positives = 80/88 (90%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRAILVV++ LT FAR  I+E+ T FHLE FQ+AELLVNIKEHVLVPEHQVL
Sbjct: 88  NRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVL 147

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           SNEEKKTLL+RYT+KE QLPRIQ+TDPI
Sbjct: 148 SNEEKKTLLERYTVKETQLPRIQITDPI 175


>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  141 bits (355), Expect = 1e-31
 Identities = 71/89 (79%), Positives = 80/89 (89%)
 Frame = +3

Query: 6   ISRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQV 185
           I+RMKSENV RA+LVV++ LT FAR  ISE+ T FHLE FQ+AELLVNIKEHVLVPEHQV
Sbjct: 87  INRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLEVFQEAELLVNIKEHVLVPEHQV 146

Query: 186 LSNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           L+NEEKKTLL+RYT+KE QLPRIQVTDPI
Sbjct: 147 LTNEEKKTLLERYTVKETQLPRIQVTDPI 175


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  137 bits (346), Expect = 1e-30
 Identities = 70/88 (79%), Positives = 77/88 (87%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRAILVV++ LT FAR  I E+   FHLE FQ+AELLVNIKEHVLVPEHQVL
Sbjct: 88  NRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLEVFQEAELLVNIKEHVLVPEHQVL 147

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           +NEEKKTLL RYT+KE QLPRIQVTDPI
Sbjct: 148 TNEEKKTLLKRYTVKETQLPRIQVTDPI 175


>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
           gi|557107329|gb|ESQ47636.1| hypothetical protein
           EUTSA_v10021534mg [Eutrema salsugineum]
          Length = 206

 Score =  137 bits (346), Expect = 1e-30
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRAILVV++ LT FAR  ISE+ + FHLE FQ+AE+LVNIKEHVLVPEHQVL
Sbjct: 88  NRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVL 147

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           + EEKKTLL+RYT+KE QLPRIQVTDPI
Sbjct: 148 TTEEKKTLLERYTVKETQLPRIQVTDPI 175


>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
           gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
           Full=DNA-directed RNA polymerases II and IV subunit 5A;
           Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
           II subunit E; AltName: Full=RNA polymerase I, II and III
           24.3 kDa subunit; Short=AtRPB24.3
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           NRPB5 [Arabidopsis thaliana]
          Length = 205

 Score =  137 bits (346), Expect = 1e-30
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRAILVV++ LT FAR  ISE+ + FHLE FQ+AE+LVNIKEHVLVPEHQVL
Sbjct: 87  NRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVL 146

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           + EEKKTLL+RYT+KE QLPRIQVTDPI
Sbjct: 147 TTEEKKTLLERYTVKETQLPRIQVTDPI 174


>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  137 bits (346), Expect = 1e-30
 Identities = 69/88 (78%), Positives = 80/88 (90%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRAILVV++ LT FAR  I+E+ T FHLE FQ+AELLVNIKEHVLVPEHQVL
Sbjct: 68  NRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVL 127

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           ++EEKKTLL+RYT+KE QLPRIQV+DPI
Sbjct: 128 TSEEKKTLLERYTVKETQLPRIQVSDPI 155


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  137 bits (346), Expect = 1e-30
 Identities = 69/88 (78%), Positives = 80/88 (90%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRAILVV++ LT FAR  I+E+ T FHLE FQ+AELLVNIKEHVLVPEHQVL
Sbjct: 88  NRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVL 147

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           ++EEKKTLL+RYT+KE QLPRIQV+DPI
Sbjct: 148 TSEEKKTLLERYTVKETQLPRIQVSDPI 175


>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
           gi|482567281|gb|EOA31470.1| hypothetical protein
           CARUB_v10014656mg [Capsella rubella]
          Length = 205

 Score =  137 bits (344), Expect = 2e-30
 Identities = 68/88 (77%), Positives = 80/88 (90%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENV+RAILVV++ LT FAR  ISE+ + FHLE FQ+AE+LVNIKEHVLVPEHQVL
Sbjct: 87  NRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVL 146

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           ++EEKKTLL+RYT+KE QLPRIQVTDPI
Sbjct: 147 TSEEKKTLLERYTVKETQLPRIQVTDPI 174


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  136 bits (343), Expect = 3e-30
 Identities = 68/88 (77%), Positives = 79/88 (89%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENV+RAILVV++ LT FAR  ISE+ + FHLE FQ+AE+LVNIKEHVLVPEHQVL
Sbjct: 87  NRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVL 146

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           + EEKKTLL+RYT+KE QLPRIQVTDPI
Sbjct: 147 TTEEKKTLLERYTVKETQLPRIQVTDPI 174


>ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223546721|gb|EEF48219.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 225

 Score =  136 bits (343), Expect = 3e-30
 Identities = 67/88 (76%), Positives = 80/88 (90%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRAILVV++ LT FAR  I+E+ + FHLE FQ++ELLVNIKEHVLVPEHQVL
Sbjct: 107 NRMKSENVFRAILVVQQSLTPFARTCIAEIASKFHLEVFQESELLVNIKEHVLVPEHQVL 166

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           +NEEKKTLL+RYT+KE QLPRIQ++DPI
Sbjct: 167 TNEEKKTLLERYTVKETQLPRIQISDPI 194


>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
           gi|548863022|gb|ERN20377.1| hypothetical protein
           AMTR_s00068p00034280 [Amborella trichopoda]
          Length = 206

 Score =  135 bits (339), Expect = 8e-30
 Identities = 66/87 (75%), Positives = 78/87 (89%)
 Frame = +3

Query: 12  RMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVLS 191
           RMKSENVFRAILV+++ LT FAR+ + E+   FHLE FQ++ELLVNIKEHVLVPEHQVL+
Sbjct: 89  RMKSENVFRAILVLQQNLTPFARQCVQEISAKFHLEIFQESELLVNIKEHVLVPEHQVLT 148

Query: 192 NEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           +EEKKTLL+RYTLKE QLPRIQ+TDPI
Sbjct: 149 SEEKKTLLERYTLKETQLPRIQITDPI 175


>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  133 bits (334), Expect = 3e-29
 Identities = 65/88 (73%), Positives = 78/88 (88%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENVFRA+LVV++ LT FAR  I+E+ + FHLE FQ++ELLVN+KEH LVPEHQVL
Sbjct: 88  NRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHLEVFQESELLVNVKEHSLVPEHQVL 147

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           +NEEKKTLL RYT+KE QLPRIQV+DPI
Sbjct: 148 TNEEKKTLLQRYTVKETQLPRIQVSDPI 175


>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 208

 Score =  132 bits (332), Expect = 5e-29
 Identities = 67/89 (75%), Positives = 79/89 (88%), Gaps = 1/89 (1%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFT-GFHLEPFQDAELLVNIKEHVLVPEHQV 185
           +RMKSENVFRAILVV++ LT FAR  +SE  +  FHLE FQ+AELLVNIK+HVLVPEHQ+
Sbjct: 89  TRMKSENVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQL 148

Query: 186 LSNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           L+NEEKKTLL+RYT+KE QLPRIQVTDP+
Sbjct: 149 LNNEEKKTLLERYTVKETQLPRIQVTDPV 177


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  132 bits (332), Expect = 5e-29
 Identities = 67/89 (75%), Positives = 79/89 (88%), Gaps = 1/89 (1%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFT-GFHLEPFQDAELLVNIKEHVLVPEHQV 185
           +RMKSENVFRAILVV++ LT FAR  +SE  +  FHLE FQ+AELLVNIK+HVLVPEHQ+
Sbjct: 88  TRMKSENVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQL 147

Query: 186 LSNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           L+NEEKKTLL+RYT+KE QLPRIQVTDP+
Sbjct: 148 LNNEEKKTLLERYTVKETQLPRIQVTDPV 176


>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score =  131 bits (329), Expect = 1e-28
 Identities = 64/89 (71%), Positives = 78/89 (87%)
 Frame = +3

Query: 6   ISRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQV 185
           I+RM SENV+RAILV +  LT FAR S++E+ + FHLE FQ+AELLVNIK+HVLVPEHQV
Sbjct: 87  INRMNSENVYRAILVCQTSLTPFARTSVAEISSKFHLEVFQEAELLVNIKDHVLVPEHQV 146

Query: 186 LSNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           L++ EKKTLL+RYT+KE QLPRIQVTDP+
Sbjct: 147 LTDTEKKTLLERYTVKETQLPRIQVTDPV 175


>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
          Length = 206

 Score =  130 bits (327), Expect = 2e-28
 Identities = 63/88 (71%), Positives = 76/88 (86%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMK E V RA+L+V++ LT FAR  ISE+ T FHLE FQ+AE+L+NIKEHVLVPEHQVL
Sbjct: 88  NRMKEEGVHRAVLIVQQNLTPFARTCISEISTKFHLEVFQEAEMLINIKEHVLVPEHQVL 147

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           + EEKKTLL+RYT+KE QLPRIQ+TDPI
Sbjct: 148 TPEEKKTLLERYTVKETQLPRIQITDPI 175


>ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Fragaria vesca subsp. vesca]
          Length = 206

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/89 (73%), Positives = 77/89 (86%)
 Frame = +3

Query: 6   ISRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQV 185
           I+RM  ENV RAILV ++ LT FA+ SISEM + +HLE FQ+AELLVNIKEHVLVPEH+V
Sbjct: 87  ITRMNQENVIRAILVAQQNLTPFAKTSISEMGSKYHLEIFQEAELLVNIKEHVLVPEHRV 146

Query: 186 LSNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           L+NEEKKTLL+RYT+KE QLPRIQ+ DPI
Sbjct: 147 LTNEEKKTLLERYTVKETQLPRIQLIDPI 175


>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
           gi|462414880|gb|EMJ19617.1| hypothetical protein
           PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/88 (73%), Positives = 76/88 (86%)
 Frame = +3

Query: 9   SRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVL 188
           +RMKSENV RA+LV ++ LT FA+  ISE+ + FHLE FQ+AELLVNIKEHVLVPEH VL
Sbjct: 88  NRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLEVFQEAELLVNIKEHVLVPEHLVL 147

Query: 189 SNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           + EEKKTLL+RYT+KE QLPRIQVTDPI
Sbjct: 148 TTEEKKTLLERYTVKETQLPRIQVTDPI 175


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Solanum lycopersicum]
           gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           isoform 2 [Solanum lycopersicum]
          Length = 206

 Score =  130 bits (326), Expect = 2e-28
 Identities = 63/87 (72%), Positives = 76/87 (87%)
 Frame = +3

Query: 12  RMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQVLS 191
           RMK E+VF+AIL+V++ LT FAR  ISE+ T FHLE FQ+AE+LVNIK HVL+PEHQ+LS
Sbjct: 89  RMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLEVFQEAEMLVNIKNHVLIPEHQLLS 148

Query: 192 NEEKKTLLDRYTLKEIQLPRIQVTDPI 272
            EEKKTLL+RYT+KE QLPRIQ+TDPI
Sbjct: 149 PEEKKTLLERYTVKETQLPRIQITDPI 175


>ref|XP_004145446.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449487698|ref|XP_004157756.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 205

 Score =  129 bits (324), Expect = 4e-28
 Identities = 65/89 (73%), Positives = 80/89 (89%)
 Frame = +3

Query: 6   ISRMKSENVFRAILVVEKGLTSFARRSISEMFTGFHLEPFQDAELLVNIKEHVLVPEHQV 185
           I+RMKS+NVFRAILVV++ L+SFAR SI E    FHLE FQ+AELLVNIK+HVL+PEHQ+
Sbjct: 87  INRMKSDNVFRAILVVQEKLSSFARSSICEA-PKFHLEVFQEAELLVNIKDHVLIPEHQL 145

Query: 186 LSNEEKKTLLDRYTLKEIQLPRIQVTDPI 272
           L+NE+KKTLL+RYT+K+ QLPR+QVTDPI
Sbjct: 146 LTNEDKKTLLERYTVKDTQLPRMQVTDPI 174