BLASTX nr result
ID: Cocculus23_contig00059453
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00059453
(391 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera] 134 1e-29
gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis] 124 2e-26
ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prun... 106 3e-21
ref|XP_004244333.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006346080.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_002531775.1| pentatricopeptide repeat-containing protein,... 94 3e-17
gb|EXB23273.1| hypothetical protein L484_001970 [Morus notabilis] 76 6e-12
ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_002299078.1| hypothetical protein POPTR_0001s47560g [Popu... 75 9e-12
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_007221014.1| hypothetical protein PRUPE_ppa023643mg, part... 75 1e-11
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ... 75 1e-11
ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_004301012.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis] 73 5e-11
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A... 72 6e-11
ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Popu... 72 8e-11
ref|XP_007208504.1| hypothetical protein PRUPE_ppa026555mg [Prun... 72 8e-11
emb|CBI14948.3| unnamed protein product [Vitis vinifera] 72 8e-11
>emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 134 bits (337), Expect = 1e-29
Identities = 61/99 (61%), Positives = 77/99 (77%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNIM 274
CH+ VRQ+HAQF++SG+LA PPNA +L+DSY+ MSQ+ +A+ VFN + SP +AYN M
Sbjct: 35 CHNFQEVRQIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDVFAYNAM 94
Query: 275 IRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
IRG+T N PYDSLLLY+K+L GL PDNYT TF LK C
Sbjct: 95 IRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVC 133
>gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis]
Length = 523
Score = 124 bits (310), Expect = 2e-26
Identities = 52/99 (52%), Positives = 76/99 (76%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNIM 274
CH+ H VRQ+HAQ V+SG++ PPN +L++SY+ +SQ +A+++FN +HSP +AYN +
Sbjct: 19 CHNFHEVRQVHAQLVVSGLVNRPPNGGRLVESYVRVSQTQYALAIFNTIHSPDVFAYNTI 78
Query: 275 IRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
+RG+ PY+SLL+Y K+L +GLIPDN+T TF LKAC
Sbjct: 79 MRGLMLGKDPYNSLLMYEKLLMNGLIPDNFTYTFVLKAC 117
>ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prunus persica]
gi|462404122|gb|EMJ09679.1| hypothetical protein
PRUPE_ppa018503mg [Prunus persica]
Length = 509
Score = 106 bits (265), Expect = 3e-21
Identities = 51/99 (51%), Positives = 69/99 (69%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNIM 274
C + VRQ+HAQ V+SG+L PPNA +L+ SY+ +SQ+ HA SVF+ + P +AYN M
Sbjct: 11 CSNFLEVRQVHAQLVVSGLLDRPPNAGRLLQSYVTVSQIYHASSVFDRISCPDVFAYNNM 70
Query: 275 IRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
IRG+ P +SLLLY+K++ GL PD+YT F LKAC
Sbjct: 71 IRGLILGKCPNNSLLLYNKLVLDGLKPDSYTYAFVLKAC 109
>ref|XP_004244333.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum lycopersicum]
Length = 527
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/100 (44%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNL-LHSPSGYAYNI 271
C V+QLH Q +++G++ PN KL++SY+ +S+ D A+ VFN + SP +AYN+
Sbjct: 36 CREKKEVKQLHGQLILNGLIHRFPNGAKLVESYVGVSETDDALLVFNSSIQSPDTFAYNV 95
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
MIRG+ + P +SL LY ++++ GL PD++T TF LKAC
Sbjct: 96 MIRGLILSKRPIESLFLYERLVTDGLSPDSHTYTFVLKAC 135
>ref|XP_006346080.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 527
Score = 97.1 bits (240), Expect = 2e-18
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNL-LHSPSGYAYNI 271
C V QLH Q +++G++ PN KL++SY+ +S+ D A+ VFN + SP +AYN+
Sbjct: 36 CREKKEVEQLHGQLILNGLIHRFPNGAKLVESYVGVSETDDALLVFNSSIQSPDTFAYNV 95
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
MIRG+ + P +SL LY ++++ GL PD++T TF LKAC
Sbjct: 96 MIRGLILSKRPIESLFLYERLVTDGLSPDSHTYTFVLKAC 135
>ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528611|gb|EEF30631.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 498
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/97 (48%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +2
Query: 104 VHHVRQLHAQFVISGVLANPPNAVK-LIDSYLLMSQLDHAMSVFNLLHSPSGYAYNIMIR 280
+H VRQLHAQFV+SG+L + + L++SY+ MS++ +A S+F + + YN MIR
Sbjct: 1 MHEVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIR 60
Query: 281 GITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
G+ PYDSLLL++++L L PDNYT TF LKAC
Sbjct: 61 GLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKAC 97
>gb|EXB23273.1| hypothetical protein L484_001970 [Morus notabilis]
Length = 564
Score = 75.9 bits (185), Expect = 6e-12
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYL--LMSQLDHAMSVFNLLHSPSGYAY 265
+C ++ ++QLH + S V+ + KLID + L +A SVFN + P+ Y +
Sbjct: 14 KCKTMAELKQLHGLMITSPVIRSRIPVSKLIDFCVDPKAGDLHYARSVFNRIAQPTIYIW 73
Query: 266 NIMIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
N MIRG + ++ P ++L++Y KML G +PDN+T F LKAC
Sbjct: 74 NSMIRGYSNSDTPVEALIMYRKMLQMGSLPDNFTFPFVLKAC 115
>ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 75.5 bits (184), Expect = 7e-12
Identities = 34/100 (34%), Positives = 61/100 (61%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNI 271
RC+S+ H++Q+HA+F++ G NP + KLID Y + L+H++ VF + P+ +N
Sbjct: 36 RCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNA 95
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
++R +T +LL+Y +M++ + PD T F L++C
Sbjct: 96 ILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSC 135
>ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 75.5 bits (184), Expect = 7e-12
Identities = 34/100 (34%), Positives = 61/100 (61%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNI 271
RC+S+ H++Q+HA+F++ G NP + KLID Y + L+H++ VF + P+ +N
Sbjct: 36 RCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNA 95
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
++R +T +LL+Y +M++ + PD T F L++C
Sbjct: 96 ILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSC 135
>ref|XP_002299078.1| hypothetical protein POPTR_0001s47560g [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| hypothetical protein
POPTR_0001s47560g [Populus trichocarpa]
Length = 488
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLA-NPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNI 271
CH V+QLHAQFV+SG+L +P A +L+++Y+ MSQ+ +A S+F + SP + YN
Sbjct: 23 CHDFQEVKQLHAQFVVSGLLGYHPLCARRLLEAYVTMSQIYYAFSIFERIPSPDVFVYNT 82
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
MIRG+T DN+T TF LKAC
Sbjct: 83 MIRGLTM---------------------DNFTYTFVLKAC 101
>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Fragaria vesca subsp. vesca]
Length = 605
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/100 (36%), Positives = 59/100 (59%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNI 271
RC ++ H++Q+HAQ + + + +P A KLI ++ L + A++VFN +H P+ + YN
Sbjct: 28 RCTNLAHIKQVHAQILKAHLHQDPHTAPKLIAAFSLCRHMALAVNVFNQVHHPNVHLYNT 87
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
+IR N P + + M + G+ PDN+T F LKAC
Sbjct: 88 LIRAHIHNNQPSQAFAAFFDMQAHGVYPDNFTFPFLLKAC 127
>ref|XP_007221014.1| hypothetical protein PRUPE_ppa023643mg, partial [Prunus persica]
gi|462417476|gb|EMJ22213.1| hypothetical protein
PRUPE_ppa023643mg, partial [Prunus persica]
Length = 888
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/99 (38%), Positives = 54/99 (54%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNIM 274
C + + Q+HA ++SG+ + LI+SY L + A VF+ +PS +N M
Sbjct: 43 CRDLKSLLQIHAHLIVSGLQQDNSTLTHLINSYSLFKKSGLASLVFDSAQNPSVILWNSM 102
Query: 275 IRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
IR T AN ++ +YH ML G+ PDNYT F LKAC
Sbjct: 103 IRAYTRANKYKEARKMYHSMLEQGVEPDNYTFNFVLKAC 141
>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +2
Query: 116 RQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNIMIRGITAA 295
+QLHAQF G+ N A KL+ Y + + L +A ++F+ + + + +N++IRG A
Sbjct: 67 KQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGY-AW 125
Query: 296 NMPYDS-LLLYHKMLSSGLIPDNYTCTFALKAC 391
N P+D+ ++LYHKML GL PDN+T F LKAC
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKAC 158
>ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 655
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLID--SYLLMSQLDHAMSVFNLLHSPSGYAY 265
+C S+ H++QLHAQ ++ + + KLI S L +A VF+ +H P+ Y Y
Sbjct: 39 QCSSMTHLKQLHAQIILHRLTSENLTVGKLISFCSVSAAGDLRYAQLVFDQVHEPNKYMY 98
Query: 266 NIMIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
N +IRG + +N + ++ LY+ M++SGL P+ +T F LK C
Sbjct: 99 NSLIRGYSNSNDTFKAMSLYYHMINSGLSPNEFTLPFVLKVC 140
>ref|XP_004301012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Fragaria vesca subsp. vesca]
Length = 704
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDS--YLLMSQLDHAMSVFNLLHSPSGYAY 265
RC + + Q+HA + + +L NP L++S +L +D+A+S+F L P AY
Sbjct: 37 RCKTTRDLNQVHAHLIKTRLLLNPSITENLLESAALILPDAMDYALSIFRNLEEPDTLAY 96
Query: 266 NIMIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
NI+IR +T P D+++L+ KM+ + + PD +T + LKAC
Sbjct: 97 NIIIRSLTLKPSPLDAIVLFIKMVENSVQPDEFTFSSVLKAC 138
>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
Length = 599
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/100 (36%), Positives = 61/100 (61%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNI 271
+C ++ H++QLHAQ + + + +P A KLI ++ L Q+ A++VF+ + P+ + +N
Sbjct: 28 KCANILHIKQLHAQIIRANLHLDPFVAPKLIAAFSLCRQIALAVNVFDQIPEPNVHVFNA 87
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
MIR T + + + M S+G+ PDNYT +F LKAC
Sbjct: 88 MIRAHTQNSQGPQAFAAFFNMQSNGVSPDNYTYSFLLKAC 127
>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
gi|548847192|gb|ERN06396.1| hypothetical protein
AMTR_s00016p00252780 [Amborella trichopoda]
Length = 428
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/100 (33%), Positives = 59/100 (59%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNI 271
+C + +H+ Q+HA +G+ + KLI+ + ++DHA VFN + +P + +N
Sbjct: 40 KCSTSNHLLQIHAHLFRTGLHRDYILITKLINLCSIHQKIDHATLVFNQIENPLTFTWNT 99
Query: 272 MIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
MIR +N P +++L+Y+ M+ G +PD +T F +KAC
Sbjct: 100 MIRAYFKSNYPEEAILMYNLMVIHGFLPDKFTYPFVIKAC 139
>ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa]
gi|550332465|gb|EEE88523.2| hypothetical protein
POPTR_0008s05220g [Populus trichocarpa]
Length = 878
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLDHAMSVFNLLHSPSGYAYNIM 274
C +++ + Q+H + +SG+ + LI SYLL + ++A +F+ L +PS YN +
Sbjct: 43 CKTLNSLLQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYARFLFDSLPNPSVMLYNSI 102
Query: 275 IRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
IR + +++ +YH ML+ GL PD YT TF LKAC
Sbjct: 103 IRAYSRTKNHQEAINIYHCMLNKGLEPDKYTFTFVLKAC 141
>ref|XP_007208504.1| hypothetical protein PRUPE_ppa026555mg [Prunus persica]
gi|462404146|gb|EMJ09703.1| hypothetical protein
PRUPE_ppa026555mg [Prunus persica]
Length = 565
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = +2
Query: 95 CHSVHHVRQLHAQFVISGVLANPPNAVKLIDSYLLMSQLD--HAMSVFNLLHSPSGYAYN 268
C S+ ++QLH + + V N +L+D D +A SVF+ ++ P Y +N
Sbjct: 15 CKSMSELKQLHGLMITTSVFNNVIPLSRLVDFCANSEARDLVYAKSVFHQINQPRVYIWN 74
Query: 269 IMIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
MIRG + + P +SL++Y +ML G +PDN+T F LKAC
Sbjct: 75 SMIRGYSNSENPAESLIMYREMLQRGYVPDNFTFPFVLKAC 115
>emb|CBI14948.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +2
Query: 92 RCHSVHHVRQLHAQFVISGVLANPPNAVKLIDS--YLLMSQLDHAMSVFNLLHSPSGYAY 265
+C ++ + ++HA + + +L P A L++S LL + +D+A+S+F + P AY
Sbjct: 33 QCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAY 92
Query: 266 NIMIRGITAANMPYDSLLLYHKMLSSGLIPDNYTCTFALKAC 391
NIMIRG T P++++LL+ +M + + PD +T LK C
Sbjct: 93 NIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVC 134