BLASTX nr result
ID: Cocculus23_contig00059446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00059446
(285 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 125 6e-27
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614... 120 3e-25
ref|XP_006494540.1| PREDICTED: uncharacterized protein LOC102622... 119 4e-25
ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610... 117 2e-24
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623... 115 8e-24
gb|AAL91601.1|AC099400_7 Putative gag-pol precursor [Oryza sativ... 112 4e-23
gb|AAP51765.2| retrotransposon protein, putative, Ty3-gypsy subc... 112 4e-23
emb|CAE03255.1| OSJNBa0011J08.10 [Oryza sativa Japonica Group] 111 9e-23
emb|CAE01580.2| OSJNBa0068L06.6 [Oryza sativa Japonica Group] gi... 111 1e-22
gb|ABB47210.1| retrotransposon protein, putative, Ty3-gypsy subc... 110 2e-22
gb|AAM00991.1|AC090482_20 Putative retroelement [Oryza sativa Ja... 110 2e-22
gb|EXC25014.1| Retrovirus-related Pol polyprotein from transposo... 110 2e-22
emb|CAE04437.2| OSJNBa0018J19.4 [Oryza sativa Japonica Group] 110 2e-22
gb|AAD11616.1| prpol [Zea mays] 110 2e-22
gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subc... 110 3e-22
gb|AAL67586.1|AC018929_8 putative GAG-POL precursor [Oryza sativ... 110 3e-22
gb|ABA98107.1| retrotransposon protein, putative, Ty3-gypsy subc... 109 3e-22
gb|ABF93727.1| retrotransposon protein, putative, Ty3-gypsy subc... 109 3e-22
emb|CAE02225.2| OSJNBb0015C06.3 [Oryza sativa Japonica Group] 109 3e-22
emb|CAI44627.1| B1168G10.11 [Oryza sativa Japonica Group] 109 3e-22
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 125 bits (314), Expect = 6e-27
Identities = 59/95 (62%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 HQMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAA 180
++MKLNP KC FGVSS KFLG +V+ RGIEANL+KI+A+++M+ P T+K +Q LTG LAA
Sbjct: 1040 YKMKLNPEKCAFGVSSGKFLGYLVSHRGIEANLEKIRAVIEMRSPRTVKEVQSLTGKLAA 1099
Query: 181 FNRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAF 282
NRFIS +TDKC FF+I+ + K + WTPECE+AF
Sbjct: 1100 LNRFISRATDKCHPFFQIIKKGKKMEWTPECEEAF 1134
>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
Length = 1089
Score = 120 bits (300), Expect = 3e-25
Identities = 56/95 (58%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 HQMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAA 180
++MKLNP KC FGV S KFLG +V+ RGIEAN +KI+A+++M+ P T+K +Q LTG LAA
Sbjct: 873 YEMKLNPEKCAFGVGSGKFLGYLVSHRGIEANPEKIRAVIEMRSPRTVKEVQSLTGKLAA 932
Query: 181 FNRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAF 282
NRFIS +TDKC FF+++ + K + WTPECE AF
Sbjct: 933 LNRFISRATDKCHPFFQVIKKGKKMEWTPECEGAF 967
>ref|XP_006494540.1| PREDICTED: uncharacterized protein LOC102622243 [Citrus sinensis]
Length = 451
Score = 119 bits (298), Expect = 4e-25
Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 HQMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAA 180
++MKLNP KC FGV S KFLG MV+ RGIEAN +KIQA++ M P +K +Q LTG LAA
Sbjct: 59 YKMKLNPEKCAFGVESGKFLGFMVSHRGIEANPEKIQAIVQMTSPRNLKEMQSLTGRLAA 118
Query: 181 FNRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RFIS +TDKC FF+++ R K WTPECE+AFQ
Sbjct: 119 LSRFISKATDKCQPFFQVIRRGKKTEWTPECEEAFQ 154
>ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610907 [Citrus sinensis]
Length = 1231
Score = 117 bits (293), Expect = 2e-24
Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 HQMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAA 180
++MKLN KC FGV S KFLG MV+ RGIEAN +KIQA++ MK P +K +Q LTG LAA
Sbjct: 379 YKMKLNLEKCAFGVESEKFLGFMVSHRGIEANPEKIQAIVQMKSPRNLKKMQSLTGRLAA 438
Query: 181 FNRFISHSTDKCLLFFK-ILRAKVVHWTPECEKAFQ 285
+RFIS +TDKC FF+ I+R K WTPEC++AFQ
Sbjct: 439 LSRFISKATDKCQPFFQVIMRGKKTEWTPECKEAFQ 474
>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
Length = 1407
Score = 115 bits (287), Expect = 8e-24
Identities = 56/96 (58%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 HQMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAA 180
++MKLNP KC FGV S KFLG MV+ RGIEAN +KIQA++ M P +K +Q LTG LAA
Sbjct: 1053 YKMKLNPEKCAFGVESGKFLGFMVSHRGIEANPEKIQAIVQMTSPRNLKEMQSLTGRLAA 1112
Query: 181 FNRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RFIS +TDKC FF+++ R K WTP CE+AF+
Sbjct: 1113 LSRFISKATDKCQPFFQVMRRGKKTEWTPGCEEAFR 1148
>gb|AAL91601.1|AC099400_7 Putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1416
Score = 112 bits (281), Expect = 4e-23
Identities = 53/95 (55%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV SRK LG MV+QRGI+AN +KI A+L+MKPP++ K +QKLTGC+AA
Sbjct: 864 KMKLNPEKCIFGVPSRKLLGFMVSQRGIQANPEKINAILNMKPPSSQKDVQKLTGCMAAL 923
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 924 SRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 958
>gb|AAP51765.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1416
Score = 112 bits (281), Expect = 4e-23
Identities = 53/95 (55%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV SRK LG MV+QRGI+AN +KI A+L+MKPP++ K +QKLTGC+AA
Sbjct: 864 KMKLNPEKCIFGVPSRKLLGFMVSQRGIQANPEKINAILNMKPPSSQKDVQKLTGCMAAL 923
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 924 SRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 958
>emb|CAE03255.1| OSJNBa0011J08.10 [Oryza sativa Japonica Group]
Length = 788
Score = 111 bits (278), Expect = 9e-23
Identities = 53/95 (55%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV S K LG MV+QRGI+AN +KI A+L+MKPP+T K +QKLTGC+AA
Sbjct: 171 RMKLNPEKCIFGVPSGKLLGFMVSQRGIQANPEKINAILNMKPPSTQKDVQKLTGCMAAL 230
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 231 SRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 265
>emb|CAE01580.2| OSJNBa0068L06.6 [Oryza sativa Japonica Group]
gi|38567700|emb|CAE75990.1| B1160F02.21 [Oryza sativa
Japonica Group]
Length = 604
Score = 111 bits (277), Expect = 1e-22
Identities = 52/94 (55%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 7 MKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAFN 186
MKLNP KC+FGV S KFLG MV+ RGI+ANL+KI A+L+MKPP++ K +QKLTGC+AA +
Sbjct: 1 MKLNPEKCIFGVPSGKFLGFMVSHRGIQANLEKINAILNMKPPSSQKDVQKLTGCMAALS 60
Query: 187 RFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+F+S ++ + FFK+L + W PE +KAF+
Sbjct: 61 QFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 94
>gb|ABB47210.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1995
Score = 110 bits (276), Expect = 2e-22
Identities = 52/95 (54%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC FGV S K LG MV+ RGI+AN +K+ A+L+MKPP+T K +QKLTGC+AA
Sbjct: 1166 RMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAAL 1225
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + HW PE +KAF+
Sbjct: 1226 SRFVSRLGERGMPFFKLLKKTDDFHWGPEAQKAFE 1260
>gb|AAM00991.1|AC090482_20 Putative retroelement [Oryza sativa Japonica Group]
Length = 2017
Score = 110 bits (276), Expect = 2e-22
Identities = 52/95 (54%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC FGV S K LG MV+ RGI+AN +K+ A+L+MKPP+T K +QKLTGC+AA
Sbjct: 1188 RMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAAL 1247
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + HW PE +KAF+
Sbjct: 1248 SRFVSRLGERGMPFFKLLKKTDDFHWGPEAQKAFE 1282
>gb|EXC25014.1| Retrovirus-related Pol polyprotein from transposon 412 [Morus
notabilis]
Length = 399
Score = 110 bits (275), Expect = 2e-22
Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 HQMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAA 180
+ MKLNP KC F V KFL MV+ R IEAN +KI+AL DMK PT K +Q+LTGC+AA
Sbjct: 25 YHMKLNPLKCAFEVGFGKFLSFMVSNREIEANPEKIKALQDMKSPTRPKEVQRLTGCVAA 84
Query: 181 FNRFISHSTDKCLLFFKILR-AKVVHWTPECEKAFQ 285
NRFIS +TDKC+ FF L+ + WTP CE+AFQ
Sbjct: 85 LNRFISKATDKCVPFFDTLKGSHHFEWTPRCEEAFQ 120
>emb|CAE04437.2| OSJNBa0018J19.4 [Oryza sativa Japonica Group]
Length = 1527
Score = 110 bits (275), Expect = 2e-22
Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV K LG MV+QRGI+AN +KI A+L+MKPP++ KG+QKLTGC+AA
Sbjct: 1194 KMKLNPEKCIFGVPLGKLLGFMVSQRGIQANPEKINAILNMKPPSSQKGVQKLTGCMAAL 1253
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 1254 SRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 1288
>gb|AAD11616.1| prpol [Zea mays]
Length = 479
Score = 110 bits (275), Expect = 2e-22
Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 7 MKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAFN 186
+KLNP KCVFGV KFLG +V+ +GIEAN +KI+A+L M+PPTT KG Q+LTG LA+ N
Sbjct: 116 LKLNPEKCVFGVKKGKFLGCLVSTKGIEANPNKIEAILRMEPPTTRKGAQRLTGRLASLN 175
Query: 187 RFISHSTDKCLLFFKILR-AKVVHWTPECEKAFQ 285
RFIS S ++ L FF++L+ AKV W P +KAF+
Sbjct: 176 RFISRSRERNLPFFEVLKSAKVFQWGPSQQKAFE 209
>gb|ABA93786.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1498
Score = 110 bits (274), Expect = 3e-22
Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV S K LG MV+QRGI+AN +KI A+L+MKPP++ K +QKLTGC+AA
Sbjct: 877 KMKLNPEKCIFGVPSGKLLGFMVSQRGIQANPEKINAILNMKPPSSQKDVQKLTGCIAAL 936
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 937 SRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 971
>gb|AAL67586.1|AC018929_8 putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|31433656|gb|AAP55140.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1099
Score = 110 bits (274), Expect = 3e-22
Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV S K LG MV+QRGI+AN +KI A+L+MKPP++ K +QKLTGC+AA
Sbjct: 270 KMKLNPEKCIFGVPSGKLLGFMVSQRGIQANPEKINAILNMKPPSSQKDVQKLTGCMAAL 329
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 330 SRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 364
>gb|ABA98107.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 720
Score = 109 bits (273), Expect = 3e-22
Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV S K LG MV+QRGI+AN +KI A+L+MKPP++ K +QKLTGC+AA
Sbjct: 203 RMKLNPEKCIFGVPSGKLLGFMVSQRGIQANPEKINAILNMKPPSSQKDVQKLTGCMAAL 262
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 263 SRFVSQLGEREMPFFKLLKKTDNFQWGPEAQKAFE 297
>gb|ABF93727.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1053
Score = 109 bits (273), Expect = 3e-22
Identities = 51/95 (53%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGV S K LG M++QRGI+AN +KI A+L+MKPP++ K +QKLTGC+AA
Sbjct: 536 RMKLNPEKCIFGVPSGKLLGFMISQRGIQANPEKINAILNMKPPSSQKDVQKLTGCMAAL 595
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RF+S ++ + FFK+L + W PE +KAF+
Sbjct: 596 SRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFE 630
>emb|CAE02225.2| OSJNBb0015C06.3 [Oryza sativa Japonica Group]
Length = 1253
Score = 109 bits (273), Expect = 3e-22
Identities = 53/95 (55%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGVSS K LG MV+ RGI+AN +KI A+L+MKPP++ K IQKLTGC+ A
Sbjct: 650 RMKLNPEKCIFGVSSGKLLGFMVSHRGIQANPEKINAILNMKPPSSQKDIQKLTGCMVAL 709
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RFIS ++ + FFK+L + W PE +KAF+
Sbjct: 710 SRFISRLGERGMRFFKLLKKTDNFQWGPEAQKAFE 744
>emb|CAI44627.1| B1168G10.11 [Oryza sativa Japonica Group]
Length = 1489
Score = 109 bits (273), Expect = 3e-22
Identities = 53/95 (55%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +1
Query: 4 QMKLNPNKCVFGVSSRKFLGVMVNQRGIEANLDKIQALLDMKPPTTIKGIQKLTGCLAAF 183
+MKLNP KC+FGVSS K LG MV+ RGI+AN +KI A+L+MKPP++ K IQKLTGC+ A
Sbjct: 886 RMKLNPEKCIFGVSSGKLLGFMVSHRGIQANPEKINAILNMKPPSSQKDIQKLTGCMVAL 945
Query: 184 NRFISHSTDKCLLFFKIL-RAKVVHWTPECEKAFQ 285
+RFIS ++ + FFK+L + W PE +KAF+
Sbjct: 946 SRFISRLGERGMRFFKLLKKTDNFQWGPEAQKAFE 980