BLASTX nr result
ID: Cocculus23_contig00059300
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00059300
(275 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007212718.1| hypothetical protein PRUPE_ppa018797mg [Prun... 103 2e-20
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 94 2e-17
ref|XP_002305605.1| pentatricopeptide repeat-containing family p... 93 4e-17
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr... 91 2e-16
ref|XP_007025994.1| Tetratricopeptide repeat-like superfamily pr... 90 3e-16
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
gb|EYU27821.1| hypothetical protein MIMGU_mgv1a006926mg [Mimulus... 84 2e-14
ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [A... 84 3e-14
ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [A... 80 4e-13
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr... 78 1e-12
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps... 72 6e-11
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 70 3e-10
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 70 3e-10
emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|72689... 70 3e-10
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp.... 69 5e-10
dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group] 62 1e-07
gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japo... 62 1e-07
>ref|XP_007212718.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
gi|462408583|gb|EMJ13917.1| hypothetical protein
PRUPE_ppa018797mg [Prunus persica]
Length = 584
Score = 103 bits (257), Expect = 2e-20
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = -1
Query: 275 TTYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
TTYNVLL GLF R+ EEA RVFDYMRR ++++ S++IMI GL ELR+AMKIHDEM
Sbjct: 489 TTYNVLLSGLFAARRIEEAMRVFDYMRRHNLMSSASFTIMIRGLCGVKELRKAMKIHDEM 548
Query: 95 LKVGLKPDKSIYKRLISRF 39
LK+ LKPD + YKRLIS F
Sbjct: 549 LKMRLKPDAATYKRLISGF 567
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Vitis vinifera]
Length = 569
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/78 (61%), Positives = 63/78 (80%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
TYNVLL GLF E++ E+A VFD MR + +L++ S++IM++GL E ELR+AMK HDEML
Sbjct: 491 TYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMKFHDEML 550
Query: 92 KVGLKPDKSIYKRLISRF 39
K+GLKPD++ YKRLIS F
Sbjct: 551 KMGLKPDRATYKRLISGF 568
>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Solanum lycopersicum]
Length = 584
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
TY +LL LFK R+ EEA ++FDYMR +L++GS+SIMI GL E E R+AM++HD+ML
Sbjct: 506 TYGLLLDRLFKSRRHEEALKIFDYMRTHDMLSSGSFSIMIRGLCQEEEFRKAMRLHDDML 565
Query: 92 KVGLKPDKSIYKRLISRF 39
K+G KPDK YKRLIS F
Sbjct: 566 KLGFKPDKKAYKRLISGF 583
>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like isoform X1 [Solanum tuberosum]
gi|565362693|ref|XP_006348080.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X2 [Solanum tuberosum]
gi|565362695|ref|XP_006348081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X3 [Solanum tuberosum]
Length = 584
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
TY +LL LFK R+ EEA ++FDYMR +L++ S+SIMI GL E E R+AM++HD+ML
Sbjct: 506 TYGLLLDSLFKSRRREEALKIFDYMRTHDMLSSESFSIMIRGLCQEQEFRKAMRLHDDML 565
Query: 92 KVGLKPDKSIYKRLISRF 39
K+G KPDK YKRLIS F
Sbjct: 566 KLGFKPDKKAYKRLISGF 583
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/79 (56%), Positives = 59/79 (74%)
Frame = -1
Query: 275 TTYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
T YN+LL GL KE + EE+ +VFDYM+ K+ N+ S++++I GL ELR+AMK+HDEM
Sbjct: 513 TAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELRKAMKLHDEM 572
Query: 95 LKVGLKPDKSIYKRLISRF 39
L +GLKPDK YKRLI F
Sbjct: 573 LNMGLKPDKPTYKRLILEF 591
>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848569|gb|EEE86116.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
TYN+LL GL K + EE RVFDYM+ K++N+ S++I I GL E+R+AMK+HDEML
Sbjct: 485 TYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRKAMKLHDEML 544
Query: 92 KVGLKPDKSIYKRLISRF 39
+GLKPDK+ YKRLI F
Sbjct: 545 DMGLKPDKAAYKRLILEF 562
>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
gi|557551699|gb|ESR62328.1| hypothetical protein
CICLE_v10018367mg [Citrus clementina]
Length = 578
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/79 (54%), Positives = 63/79 (79%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
TY+VLL GLFK+ + EEA ++FDYM+ KV+++ S+ I+++ L ELR+AMKIHDEML
Sbjct: 500 TYDVLLDGLFKDGRMEEAVQIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKIHDEML 559
Query: 92 KVGLKPDKSIYKRLISRFL 36
K+G KPD++ YK++IS F+
Sbjct: 560 KMGHKPDEATYKQVISGFM 578
>ref|XP_007025994.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508781360|gb|EOY28616.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 578
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/79 (56%), Positives = 59/79 (74%)
Frame = -1
Query: 275 TTYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
TTYN++L L+ ERK EEA RV+DYM ++++ S++IMI L E+++AMKIHDEM
Sbjct: 499 TTYNMILDVLWGERKAEEAVRVYDYMTGLNLVDSASFTIMIRELCHMKEMKKAMKIHDEM 558
Query: 95 LKVGLKPDKSIYKRLISRF 39
L +GLKPDK YKRLIS F
Sbjct: 559 LNMGLKPDKGTYKRLISGF 577
>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Citrus sinensis]
Length = 538
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/79 (54%), Positives = 62/79 (78%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
TY+VLL GLFK+ + EEA R+FDYM+ KV+++ S+ I+++ L ELR+AMK HDEML
Sbjct: 460 TYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEML 519
Query: 92 KVGLKPDKSIYKRLISRFL 36
K+G KPD++ YK++IS F+
Sbjct: 520 KMGHKPDEATYKQVISGFM 538
>gb|EYU27821.1| hypothetical protein MIMGU_mgv1a006926mg [Mimulus guttatus]
Length = 426
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = -1
Query: 269 YNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEMLK 90
YN + LF++ + EE +VFDYM+ K+ + S+S MI GL E R+AM+ HDEML+
Sbjct: 349 YNKFIAALFRDNRAEETIKVFDYMKACKIFDGESFSHMICGLCRVKEFRKAMRFHDEMLE 408
Query: 89 VGLKPDKSIYKRLISRF 39
+GLKPD+ YKRLIS F
Sbjct: 409 LGLKPDRRTYKRLISGF 425
>ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [Amborella trichopoda]
gi|548830797|gb|ERM93720.1| hypothetical protein
AMTR_s00004p00243870 [Amborella trichopoda]
Length = 359
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
+YN+LL L+ E K EEAS +FDYMR K V ++ S+ MI+ E + A K+HDEML
Sbjct: 281 SYNILLNRLYNEGKLEEASGMFDYMRNKDVTSSASFMTMISWFCREKKFSEARKMHDEML 340
Query: 92 KVGLKPDKSIYKRLISRF 39
K GLKPD++ YKRLIS F
Sbjct: 341 KKGLKPDEATYKRLISGF 358
>ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [Amborella trichopoda]
gi|548861770|gb|ERN19141.1| hypothetical protein
AMTR_s00061p00160470 [Amborella trichopoda]
Length = 372
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEML 93
+YN+LL L+ K EEAS +FD+MR K V ++ S+ MI+ E + A K+HDEML
Sbjct: 294 SYNILLDQLYNGGKLEEASEMFDHMRNKNVTSSASFITMISWFCWEKKFSEARKMHDEML 353
Query: 92 KVGLKPDKSIYKRLISRF 39
K GLKPD++ YKRLIS F
Sbjct: 354 KKGLKPDEATYKRLISVF 371
>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
gi|557114982|gb|ESQ55265.1| hypothetical protein
EUTSA_v10024760mg [Eutrema salsugineum]
Length = 584
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Frame = -1
Query: 269 YNVLLVGLFKERKT--EEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
YN +L L ++T EEA +VF+YM+ +N+ S++IMI GL E+++AMK HDEM
Sbjct: 505 YNAVLDRLMMRQRTMVEEAVQVFEYMKEMNTVNSKSFTIMIHGLCRVKEMKKAMKSHDEM 564
Query: 95 LKVGLKPDKSIYKRLISRF 39
LK+GLKPD YKRLIS F
Sbjct: 565 LKLGLKPDLVTYKRLISGF 583
>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
gi|482553811|gb|EOA18004.1| hypothetical protein
CARUB_v10006439mg [Capsella rubella]
Length = 585
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -1
Query: 269 YNVLLVGLFKERK--TEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
YN +L L ++ EEA RVF+YM+ K +N+ S++IMI GL E+++A + HDEM
Sbjct: 506 YNAVLDRLMMRQREMVEEAVRVFEYMKEMKSVNSKSFTIMIQGLCHVKEMKKAKQSHDEM 565
Query: 95 LKVGLKPDKSIYKRLISRF 39
LK+G+KPD + YKR+I F
Sbjct: 566 LKLGMKPDLATYKRVIYGF 584
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = -1
Query: 269 YNVLLVGLFKERK--TEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
YN +L L +K EEA VF+YM+ +N+ S++IMI GL E+++AM+ HDEM
Sbjct: 472 YNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEM 531
Query: 95 LKVGLKPDKSIYKRLISRF 39
L++GLKPD YKRLI F
Sbjct: 532 LRLGLKPDLVTYKRLILGF 550
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = -1
Query: 269 YNVLLVGLFKERK--TEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
YN +L L +K EEA VF+YM+ +N+ S++IMI GL E+++AM+ HDEM
Sbjct: 506 YNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEM 565
Query: 95 LKVGLKPDKSIYKRLISRF 39
L++GLKPD YKRLI F
Sbjct: 566 LRLGLKPDLVTYKRLILGF 584
>emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|7268914|emb|CAB79117.1|
putative protein [Arabidopsis thaliana]
Length = 534
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = -1
Query: 269 YNVLLVGLFKERK--TEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
YN +L L +K EEA VF+YM+ +N+ S++IMI GL E+++AM+ HDEM
Sbjct: 455 YNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEM 514
Query: 95 LKVGLKPDKSIYKRLISRF 39
L++GLKPD YKRLI F
Sbjct: 515 LRLGLKPDLVTYKRLILGF 533
>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313697|gb|EFH44120.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = -1
Query: 269 YNVLLVGLFKERK--TEEASRVFDYMRRKKVLNAGSYSIMITGLSCENELRRAMKIHDEM 96
YN +L L +K EEA VF+YM+ K +N+ S++IMI GL E+++AM+ HDEM
Sbjct: 455 YNAVLDRLMMRQKEMVEEAVGVFEYMKEMKSVNSKSFTIMIQGLCRVKEMKKAMRSHDEM 514
Query: 95 LKVGLKPDKSIYKRLISRF 39
L++ +KPD YKRLI F
Sbjct: 515 LRLDMKPDLVSYKRLILGF 533
>dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVL-NAGSYSIMITGLSCENELRRAMKIHDEM 96
T+ L+ G K++K +EA+R+FD M V+ N ++++MI G +R+A +++D+M
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 562
Query: 95 LKVGLKPDKSIYKRLIS 45
+++GLKPD Y+ LIS
Sbjct: 563 VEMGLKPDNYTYRSLIS 579
>gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -1
Query: 272 TYNVLLVGLFKERKTEEASRVFDYMRRKKVL-NAGSYSIMITGLSCENELRRAMKIHDEM 96
T+ L+ G K++K +EA+R+FD M V+ N ++++MI G +R+A +++D+M
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 95 LKVGLKPDKSIYKRLIS 45
+++GLKPD Y+ LIS
Sbjct: 540 VEMGLKPDNYTYRSLIS 556