BLASTX nr result
ID: Cocculus23_contig00059175
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00059175
(319 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_006432815.1| hypothetical protein CICLE_v100004882mg, par... 66 6e-09
ref|XP_002319164.2| pentatricopeptide repeat-containing family p... 66 6e-09
ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prun... 66 6e-09
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
emb|CBI31710.3| unnamed protein product [Vitis vinifera] 66 6e-09
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 66 6e-09
gb|EXB40230.1| hypothetical protein L484_003942 [Morus notabilis] 65 7e-09
gb|ADE77782.1| unknown [Picea sitchensis] 65 7e-09
gb|ADE77505.1| unknown [Picea sitchensis] 65 7e-09
gb|EPS66947.1| hypothetical protein M569_07825, partial [Genlise... 65 1e-08
dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare] 65 1e-08
gb|ABK26521.1| unknown [Picea sitchensis] 65 1e-08
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006479094.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006443406.1| hypothetical protein CICLE_v10018850mg [Citr... 65 1e-08
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr... 65 1e-08
ref|XP_004973326.1| PREDICTED: putative pentatricopeptide repeat... 65 1e-08
ref|XP_007051907.1| Tetratricopeptide repeat-like superfamily pr... 65 1e-08
ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 65 1e-08
>ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Citrus sinensis]
Length = 860
Score = 65.9 bits (159), Expect = 6e-09
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDD-ATX 141
EP I +A L C++H NVEL ELA + LL + S ++ L+SNIY+ +G+W D A
Sbjct: 654 EPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARI 713
Query: 140 XXXXXXXXXXKEPGMSWVQIKEG*VKF 60
K PG SWVQ KEG F
Sbjct: 714 RSLMKHTGVKKRPGCSWVQGKEGTATF 740
>ref|XP_006432815.1| hypothetical protein CICLE_v100004882mg, partial [Citrus
clementina] gi|557534937|gb|ESR46055.1| hypothetical
protein CICLE_v100004882mg, partial [Citrus clementina]
Length = 599
Score = 65.9 bits (159), Expect = 6e-09
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDD-ATX 141
EP I +A L C++H NVEL ELA + LL + S ++ L+SNIY+ +G+W D A
Sbjct: 393 EPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARI 452
Query: 140 XXXXXXXXXXKEPGMSWVQIKEG*VKF 60
K PG SWVQ KEG F
Sbjct: 453 RSLMKHTGVKKRPGCSWVQGKEGTATF 479
>ref|XP_002319164.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550325034|gb|EEE95087.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 928
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWD--DAT 144
EPDA+I L++C +H NVE+ E A HLL + +++ VL+SN+Y+ SGKWD D T
Sbjct: 713 EPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQT 772
Query: 143 XXXXXXXXXXXKEPGMSWVQIK 78
KEPG SW+++K
Sbjct: 773 -RQMMRNRGVKKEPGRSWIEVK 793
>ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
gi|462402068|gb|EMJ07625.1| hypothetical protein
PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 314 PDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDAT-XX 138
P AS+ A L +CK+HGNV LAE A SHLL + + VL+SNIY+E+GKWD+ +
Sbjct: 532 PTASVWGALLGACKLHGNVVLAEKACSHLLELDPRNHGAYVLLSNIYAETGKWDEVSGLR 591
Query: 137 XXXXXXXXXKEPGMSWVQI 81
KEPG S +++
Sbjct: 592 KHMRDAGIKKEPGCSSIEV 610
>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDATXX 138
EPDA + A L SC+MH NV+L E+A HL+++ + V++S+IY++SG+W DA
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKA 858
Query: 137 XXXXXXXXXKE-PGMSWVQIK 78
K+ PG SWV++K
Sbjct: 859 RSKMNDLGLKKTPGCSWVELK 879
>emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDATXX 138
EPDA + A L SC+MH NV+L E+A HL+++ + V++S+IY++SG+W DA
Sbjct: 443 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKA 502
Query: 137 XXXXXXXXXKE-PGMSWVQIK 78
K+ PG SWV++K
Sbjct: 503 RSKMNDLGLKKTPGCSWVELK 523
>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDATXX 138
EPDA + A L SC+MH NV+L E+A HL+++ + V++S+IY++SG+W DA
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKA 858
Query: 137 XXXXXXXXXKE-PGMSWVQIK 78
K+ PG SWV++K
Sbjct: 859 RSKMNDLGLKKTPGCSWVELK 879
>gb|EXB40230.1| hypothetical protein L484_003942 [Morus notabilis]
Length = 810
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDAT-X 141
EPDA++ LA+C++HGNVEL E A +LL + VL+SN+YS +G+W+DA
Sbjct: 604 EPDATVWKTLLAACRVHGNVELGERAAKNLLELEPSNAVPYVLLSNMYSAAGRWEDAARI 663
Query: 140 XXXXXXXXXXKEPGMSWVQI 81
KEPG SW+++
Sbjct: 664 RRLMKSVGISKEPGCSWIEM 683
>gb|ADE77782.1| unknown [Picea sitchensis]
Length = 210
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGL-VLMSNIYSESGKWDDAT- 144
EPD S+ A L +C++HGN ELA+ HLL M ++ +G+ VL+SNIY+ +G+WDDA
Sbjct: 4 EPDVSVWGALLGACRIHGNTELAKRIAEHLLGM-EVQIAGIYVLLSNIYAAAGQWDDAAK 62
Query: 143 XXXXXXXXXXXKEPGMSWVQIK 78
K+PG SW+++K
Sbjct: 63 VRKLMKDRGVMKQPGYSWIEVK 84
>gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGL-VLMSNIYSESGKWDDAT- 144
EPD S+ A L +C++HGN ELA+ HLL M ++ +G+ VL+SNIY+ +G+WDDA
Sbjct: 308 EPDVSVWGALLGACRIHGNTELAKRIAEHLLGM-EVQIAGIYVLLSNIYAAAGQWDDAAK 366
Query: 143 XXXXXXXXXXXKEPGMSWVQIK 78
K+PG SW+++K
Sbjct: 367 VRKLMKDRGVMKQPGYSWIEVK 388
>gb|EPS66947.1| hypothetical protein M569_07825, partial [Genlisea aurea]
Length = 779
Score = 65.1 bits (157), Expect = 1e-08
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGL-VLMSNIYSESGKWDD-AT 144
EP+A + +A L+ C++HGNVELAE A LL + + EN GL L+SNIY+ + +W D A
Sbjct: 573 EPNAVVWVALLSGCRLHGNVELAEHAARKLLEL-NFENDGLYTLLSNIYARARRWKDVAR 631
Query: 143 XXXXXXXXXXXKEPGMSWVQIKEG*VKFH 57
K PG SWVQ K+G F+
Sbjct: 632 IRASMKHSGIRKRPGCSWVQGKKGTAAFY 660
>dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDD-ATX 141
EPDA + M L +C++HGN+ELA SHLL ++S VL+SN+YS G W D A
Sbjct: 573 EPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIV 632
Query: 140 XXXXXXXXXXKEPGMSWVQIK 78
K PG SW+++K
Sbjct: 633 QKEMKNKGLSKVPGWSWIEVK 653
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDA-TX 141
EP+AS+ + L +C++HGN+ELAE A L+ + VL+SNIY+ +G+WDDA
Sbjct: 164 EPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKV 223
Query: 140 XXXXXXXXXXKEPGMSWVQIK 78
KEPG SW++++
Sbjct: 224 RKMMKDRSVKKEPGCSWIEVQ 244
>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Citrus sinensis]
Length = 746
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -3
Query: 314 PDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDAT-XX 138
P AS+ A L +CK+H NVELAE A SHLL + + LVL+SNIY+++GKWD+ +
Sbjct: 540 PGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELR 599
Query: 137 XXXXXXXXXKEPGMSWVQI 81
KEPG S +++
Sbjct: 600 KHMRVSGLKKEPGCSSIEV 618
>ref|XP_006479094.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
isoform X1 [Citrus sinensis]
gi|568850820|ref|XP_006479095.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X2 [Citrus sinensis]
gi|568850822|ref|XP_006479096.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X3 [Citrus sinensis]
Length = 1077
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWD-DATX 141
EPDA + L++C++H N+E+ E A +HLL + +++ VL+SNIY+ +GKWD
Sbjct: 871 EPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQI 930
Query: 140 XXXXXXXXXXKEPGMSWVQIK 78
KEPG SW+++K
Sbjct: 931 RQIMKDRGVKKEPGQSWIEVK 951
>ref|XP_006443406.1| hypothetical protein CICLE_v10018850mg [Citrus clementina]
gi|557545668|gb|ESR56646.1| hypothetical protein
CICLE_v10018850mg [Citrus clementina]
Length = 840
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWD-DATX 141
EPDA + L++C++H N+E+ E A +HLL + +++ VL+SNIY+ +GKWD
Sbjct: 634 EPDAMVWRTLLSACRVHKNMEIGEYAANHLLELEPEDSATYVLLSNIYAAAGKWDCRDQI 693
Query: 140 XXXXXXXXXXKEPGMSWVQIK 78
KEPG SW+++K
Sbjct: 694 RQIMKDRGVKKEPGQSWIEVK 714
>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
gi|557530863|gb|ESR42046.1| hypothetical protein
CICLE_v10011151mg [Citrus clementina]
Length = 737
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -3
Query: 314 PDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDAT-XX 138
P AS+ A L +CK+H NVELAE A SHLL + + LVL+SNIY+++GKWD+ +
Sbjct: 531 PGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELR 590
Query: 137 XXXXXXXXXKEPGMSWVQI 81
KEPG S +++
Sbjct: 591 KHMRVSGLKKEPGCSSIEV 609
>ref|XP_004973326.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Setaria italica]
Length = 697
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDD-ATX 141
+PDA + M L +CK+HGN+ELA SHLL ++S VL+S++YS G W D AT
Sbjct: 568 QPDAMVWMTLLGACKIHGNMELASDVASHLLVAEPRQHSTYVLLSSMYSGLGMWSDRATL 627
Query: 140 XXXXXXXXXXKEPGMSWVQIKEG*VKFHDIN 48
K PG SW+++K + H N
Sbjct: 628 QKVMKNRGLSKVPGWSWIEVKN---ELHSFN 655
>ref|XP_007051907.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508704168|gb|EOX96064.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 809
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDAT-X 141
EPDA++ A LA+C++HGN+EL E A +L + +++SN+YS SGKW++A
Sbjct: 603 EPDATVWKALLAACRVHGNLELGERAAKNLFELEPWNAVPYIMLSNMYSASGKWEEAARI 662
Query: 140 XXXXXXXXXXKEPGMSWVQI 81
KEPG SW+++
Sbjct: 663 RRTMKSRGINKEPGCSWIEV 682
>ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 EPDASIKMAFLASCKMHGNVELAELAKSHLLRMGSLENSGLVLMSNIYSESGKWDDAT-X 141
EPDA+I + L++C++HGN+EL E A +L+++ + VL+SN++S +G+W+DA
Sbjct: 569 EPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHI 628
Query: 140 XXXXXXXXXXKEPGMSWVQIK 78
+EPG SW+++K
Sbjct: 629 RRAMKTMGIXQEPGYSWIEMK 649